Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775990

Identifier: 119775990

GI number: 119775990

Start: 3396462

End: 3396851

Strand: Reverse

Name: 119775990

Synonym: Sama_2858

Alternate gene names: NA

Gene position: 3396851-3396462 (Counterclockwise)

Preceding gene: 119775991

Following gene: 119775989

Centisome position: 78.88

GC content: 53.33

Gene sequence:

>390_bases
ATGAAAAGGACGTTATTTGCGGCGGCGCTGGCCCTGATGGGCACGGCCCAGGCAACAGAGCTGGTTTACACCCCCATCAA
CCCCAGTTTCGGTGGTTCGCCACTCAATGGCTCGTTTTTGCTGAACAAGGCACAGAGCCAGAACGACAACCAGTCTCCTT
CCAGTGAAAAGGACTTTGTGACCCGTTTCAAGGAGTCGCTGGAGCGCAATATTATCAACTCCATCACCCGCAAGGTGGCC
GATGGTGACATTACTGACGGAGTGTATGACACGGGTGACTACCGTATCGAGGTAGCCTCCAATGGCAGCGGTGTGGTGCT
GACCATTACCAACCAGCTGACAGGTGAAGTCACAGTAATTGAGATGCCAGTGTATGGAGGTAATCCATGA

Upstream 100 bases:

>100_bases
AGCAAGCGGTACTCATTACAGTGGATTATCTGGCCCAGGTGAGGGCCAATGCCCTGCTGGGTGAGGGCGCCGATCTCGCC
ATCAGCACACAGGATTGAAA

Downstream 100 bases:

>100_bases
GAGCGTTGATTGCGGTGGCGCTGCTTTCTCTGGGTGGCTGCAGCCTTATCCCGAAACCTGACCTCAATATTACCGAGGCG
CAGGTCAATCCCCTGAGTCA

Product: curli production assembly/transport component CsgF

Products: NA

Alternate protein names: Curli Production Assembly/Transport Component; Curli Fiber Protein CsgF

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MKRTLFAAALALMGTAQATELVYTPINPSFGGSPLNGSFLLNKAQSQNDNQSPSSEKDFVTRFKESLERNIINSITRKVA
DGDITDGVYDTGDYRIEVASNGSGVVLTITNQLTGEVTVIEMPVYGGNP

Sequences:

>Translated_129_residues
MKRTLFAAALALMGTAQATELVYTPINPSFGGSPLNGSFLLNKAQSQNDNQSPSSEKDFVTRFKESLERNIINSITRKVA
DGDITDGVYDTGDYRIEVASNGSGVVLTITNQLTGEVTVIEMPVYGGNP
>Mature_129_residues
MKRTLFAAALALMGTAQATELVYTPINPSFGGSPLNGSFLLNKAQSQNDNQSPSSEKDFVTRFKESLERNIINSITRKVA
DGDITDGVYDTGDYRIEVASNGSGVVLTITNQLTGEVTVIEMPVYGGNP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13820; Mature: 13820

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTLFAAALALMGTAQATELVYTPINPSFGGSPLNGSFLLNKAQSQNDNQSPSSEKDFV
CCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHH
TRFKESLERNIINSITRKVADGDITDGVYDTGDYRIEVASNGSGVVLTITNQLTGEVTVI
HHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCEEEEEECCCCEEEEEEECCCCCCEEEE
EMPVYGGNP
EEECCCCCC
>Mature Secondary Structure
MKRTLFAAALALMGTAQATELVYTPINPSFGGSPLNGSFLLNKAQSQNDNQSPSSEKDFV
CCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHH
TRFKESLERNIINSITRKVADGDITDGVYDTGDYRIEVASNGSGVVLTITNQLTGEVTVI
HHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCEEEEEECCCCEEEEEEECCCCCCEEEE
EMPVYGGNP
EEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA