Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is yeaR [C]

Identifier: 119775922

GI number: 119775922

Start: 3330555

End: 3330977

Strand: Reverse

Name: yeaR [C]

Synonym: Sama_2790

Alternate gene names: 119775922

Gene position: 3330977-3330555 (Counterclockwise)

Preceding gene: 119775924

Following gene: 119775918

Centisome position: 77.35

GC content: 52.48

Gene sequence:

>423_bases
ATGGCATTGATACCGAAAAATTATGTTCCAGTGGGTTCCACCCGGATATTCGGCGGTAATGATATACCTGAAATGCTGTT
GTCGCAGCATCGTACCCGAAATGGCTTTTACAGCCAGATTGAGGTCATTGAAGGTGAGCTCTTATGGCAAGGTTTTGGCG
ACACAGATGGCAAGCCCGGTATTGAGGTGCACCTGCGCGCCAACGACAGGGCCATGACCCACCCCGGCAAGTGTTACAGC
GTGAAGCTGCTCAGCGATGAGACCCGTTTCAGACTCAATGTGTTTGCCCATCAAAGCCTGCAGGAAAGCAATGTCGATGT
CAGCAGCACAGTGGGGCTCTTTCTCGAACCCCTTGCTCCGGACCTGACGCCTGTGGCTAAACAGACTGAGGATACTGATT
GCGAACTTCAGGCAGATCGCTGA

Upstream 100 bases:

>100_bases
GTGGTATAAACTTGTCGGCATTGCGATGCTCAAGAGTTTGGTGGCTTGGGATATGTTCCCAAAGCAGGCTTAAATTCAGG
TGAAACCGGAGACAGCGCCC

Downstream 100 bases:

>100_bases
GGTATTCCACAAACTCCACTTCCATGCCATCGGGGTCGATAAAGTACACATTGCGTCGGCCCGAATCTGGGGCACCGTCT
TTGGCAATGGCAAAACCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MALIPKNYVPVGSTRIFGGNDIPEMLLSQHRTRNGFYSQIEVIEGELLWQGFGDTDGKPGIEVHLRANDRAMTHPGKCYS
VKLLSDETRFRLNVFAHQSLQESNVDVSSTVGLFLEPLAPDLTPVAKQTEDTDCELQADR

Sequences:

>Translated_140_residues
MALIPKNYVPVGSTRIFGGNDIPEMLLSQHRTRNGFYSQIEVIEGELLWQGFGDTDGKPGIEVHLRANDRAMTHPGKCYS
VKLLSDETRFRLNVFAHQSLQESNVDVSSTVGLFLEPLAPDLTPVAKQTEDTDCELQADR
>Mature_139_residues
ALIPKNYVPVGSTRIFGGNDIPEMLLSQHRTRNGFYSQIEVIEGELLWQGFGDTDGKPGIEVHLRANDRAMTHPGKCYSV
KLLSDETRFRLNVFAHQSLQESNVDVSSTVGLFLEPLAPDLTPVAKQTEDTDCELQADR

Specific function: Unknown

COG id: COG3615

COG function: function code P; Uncharacterized protein/domain, possibly involved in tellurite resistance

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15603; Mature: 15472

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALIPKNYVPVGSTRIFGGNDIPEMLLSQHRTRNGFYSQIEVIEGELLWQGFGDTDGKPG
CCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCEEEEEECCEEEEECCCCCCCCCC
IEVHLRANDRAMTHPGKCYSVKLLSDETRFRLNVFAHQSLQESNVDVSSTVGLFLEPLAP
EEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEEECCCHHHCCCCCHHHHHEEECCCCC
DLTPVAKQTEDTDCELQADR
CCCCCCCCCCCCCCEEEECC
>Mature Secondary Structure 
ALIPKNYVPVGSTRIFGGNDIPEMLLSQHRTRNGFYSQIEVIEGELLWQGFGDTDGKPG
CCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCEEEEEECCEEEEECCCCCCCCCC
IEVHLRANDRAMTHPGKCYSVKLLSDETRFRLNVFAHQSLQESNVDVSSTVGLFLEPLAP
EEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEEECCCHHHCCCCCHHHHHEEECCCCC
DLTPVAKQTEDTDCELQADR
CCCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA