Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is yigI [C]

Identifier: 119774586

GI number: 119774586

Start: 1759442

End: 1760431

Strand: Direct

Name: yigI [C]

Synonym: Sama_1449

Alternate gene names: 119774586

Gene position: 1759442-1760431 (Clockwise)

Preceding gene: 119774585

Following gene: 119774587

Centisome position: 40.86

GC content: 53.13

Gene sequence:

>990_bases
ATGAAAGTTAATCCGGATTTTTTTGAGCTCACACCGCTGGCGCAACGCTTTGTCAGCCAACTGGCCCAGTGTCGGCGTCT
GGGTATCAAGGTGCACGAAGGCAGCGAGCATCATGTACTTTTGGAGCTGCCCTATAGTCAGGCGTTGATTGGCTACCCTG
ACACCGGGGTTATCCACGGCGGGGTGATCACCACCCTGATAGACACCGCCAGTGGCACAGCTGTGGTCTGTGCCATTCAG
GAGAAATTCCAAACCCTGGAAATTTCACCCACTCTGGATTTACGGGTCGACTATATGCGTCCTGCTGAGCCCGGCAAGAG
TGTCTACGCCTTCGCGGAATGCTACCGCTTATCGTCCAACATCGCCTTTACCCGTGCTATCGCCTATCAGGACAGCATAG
ATGAGCCCATTGCCCATGCGGTTGGCTCCTTTATGCGCATCAGTCCCGAAATGGTGGGGGAAACTTTCCGCAATGCGCTA
TTGGAAGACAACGTTATCCTTGGTCCTGTGGTGACTGAGCTTGCCCATTGTCCCGACGAGGCCCAAAGTCCCAAACCCAT
GGATGTGAAGGAAATCGTGCGTCGGGTGGCGGAACTGAACGACTTTGGCCATCTGTTGGAGCAAGTGCCTTATGCCCGCT
TCATCGGTATGGAGGTGGAGCGATTTGGGGATGAGCTGGTTTGCCGATTACCTTCGCGGGATGCCAATATTGGTAATCCT
GTGCTGCCGGCTATCCATGGTGGTGTGATTGCCGGCTTTATGGAAATGTCGGCAATCGTGCAACTGATGGTGTTTATGCA
AACCTCGAGAGTGCCTAAAGTAGTCGATTTTTCAATTGATTACCTGAGGGCCGGTTTGCATAAGGATACCTTTGCCGAGT
GTATTATTACCCGGCAGGGGCGGCGGGTCGCCAATGTGAACATCAGTTGCTGGCAAACCAATCGCAAACAGTTGATAGCC
ACGGCAAGGGCCCACTTCCTGATTGATTAA

Upstream 100 bases:

>100_bases
GCAACAGTCACGGTGGCCAGGAGGTGTACCATATTCACATGCACCTGGTGGGCGGCGAGCCTTTGGGCCCAATGCTTGCC
CAGCGTTGATTGGCGGTGTT

Downstream 100 bases:

>100_bases
GGCGCCGGATGAATACGGTTGTCTTTGGTTTCAGCTTAATCAGCGGGCATTCAGCAAAGTGCAATTACACTGATGCAGAT
TCACTGGCGAGGATAACATA

Product: hypothetical protein

Products: NA

Alternate protein names: Thioesterase Family Protein; Phenylacetic Acid Degradation-Related Protein; Phenylacetic Acid Degradation-Like Protein; Thioesterase Superfamily; Protein Possibly Involved In Aromatic Compounds Catabolism; Thioesterase Family Protein Domain Protein; Conserved Domain Protein

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MKVNPDFFELTPLAQRFVSQLAQCRRLGIKVHEGSEHHVLLELPYSQALIGYPDTGVIHGGVITTLIDTASGTAVVCAIQ
EKFQTLEISPTLDLRVDYMRPAEPGKSVYAFAECYRLSSNIAFTRAIAYQDSIDEPIAHAVGSFMRISPEMVGETFRNAL
LEDNVILGPVVTELAHCPDEAQSPKPMDVKEIVRRVAELNDFGHLLEQVPYARFIGMEVERFGDELVCRLPSRDANIGNP
VLPAIHGGVIAGFMEMSAIVQLMVFMQTSRVPKVVDFSIDYLRAGLHKDTFAECIITRQGRRVANVNISCWQTNRKQLIA
TARAHFLID

Sequences:

>Translated_329_residues
MKVNPDFFELTPLAQRFVSQLAQCRRLGIKVHEGSEHHVLLELPYSQALIGYPDTGVIHGGVITTLIDTASGTAVVCAIQ
EKFQTLEISPTLDLRVDYMRPAEPGKSVYAFAECYRLSSNIAFTRAIAYQDSIDEPIAHAVGSFMRISPEMVGETFRNAL
LEDNVILGPVVTELAHCPDEAQSPKPMDVKEIVRRVAELNDFGHLLEQVPYARFIGMEVERFGDELVCRLPSRDANIGNP
VLPAIHGGVIAGFMEMSAIVQLMVFMQTSRVPKVVDFSIDYLRAGLHKDTFAECIITRQGRRVANVNISCWQTNRKQLIA
TARAHFLID
>Mature_329_residues
MKVNPDFFELTPLAQRFVSQLAQCRRLGIKVHEGSEHHVLLELPYSQALIGYPDTGVIHGGVITTLIDTASGTAVVCAIQ
EKFQTLEISPTLDLRVDYMRPAEPGKSVYAFAECYRLSSNIAFTRAIAYQDSIDEPIAHAVGSFMRISPEMVGETFRNAL
LEDNVILGPVVTELAHCPDEAQSPKPMDVKEIVRRVAELNDFGHLLEQVPYARFIGMEVERFGDELVCRLPSRDANIGNP
VLPAIHGGVIAGFMEMSAIVQLMVFMQTSRVPKVVDFSIDYLRAGLHKDTFAECIITRQGRRVANVNISCWQTNRKQLIA
TARAHFLID

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36612; Mature: 36612

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVNPDFFELTPLAQRFVSQLAQCRRLGIKVHEGSEHHVLLELPYSQALIGYPDTGVIHG
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCCCEEECCCCCCEECC
GVITTLIDTASGTAVVCAIQEKFQTLEISPTLDLRVDYMRPAEPGKSVYAFAECYRLSSN
CHHHHHHHCCCCCEEEEEEHHCCCEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCC
IAFTRAIAYQDSIDEPIAHAVGSFMRISPEMVGETFRNALLEDNVILGPVVTELAHCPDE
CEEEHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCC
AQSPKPMDVKEIVRRVAELNDFGHLLEQVPYARFIGMEVERFGDELVCRLPSRDANIGNP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHCCCHHEEECCCCCCCCCCC
VLPAIHGGVIAGFMEMSAIVQLMVFMQTSRVPKVVDFSIDYLRAGLHKDTFAECIITRQG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCHHHHHHHHHHHCC
RRVANVNISCWQTNRKQLIATARAHFLID
CEEEEEEEEEEECCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKVNPDFFELTPLAQRFVSQLAQCRRLGIKVHEGSEHHVLLELPYSQALIGYPDTGVIHG
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCCCEEECCCCCCEECC
GVITTLIDTASGTAVVCAIQEKFQTLEISPTLDLRVDYMRPAEPGKSVYAFAECYRLSSN
CHHHHHHHCCCCCEEEEEEHHCCCEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCC
IAFTRAIAYQDSIDEPIAHAVGSFMRISPEMVGETFRNALLEDNVILGPVVTELAHCPDE
CEEEHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCC
AQSPKPMDVKEIVRRVAELNDFGHLLEQVPYARFIGMEVERFGDELVCRLPSRDANIGNP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHCCCHHEEECCCCCCCCCCC
VLPAIHGGVIAGFMEMSAIVQLMVFMQTSRVPKVVDFSIDYLRAGLHKDTFAECIITRQG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCHHHHHHHHHHHCC
RRVANVNISCWQTNRKQLIATARAHFLID
CEEEEEEEEEEECCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA