Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774532

Identifier: 119774532

GI number: 119774532

Start: 1687831

End: 1688274

Strand: Direct

Name: 119774532

Synonym: Sama_1395

Alternate gene names: NA

Gene position: 1687831-1688274 (Clockwise)

Preceding gene: 119774529

Following gene: 119774533

Centisome position: 39.2

GC content: 49.32

Gene sequence:

>444_bases
ATGAACTTCAGAGTTTCATCGTTACTGGCTGTCAGCCTGTCGCTGTGTGGTGCGCTGTTTGCCAATGCTGCACTGGCCGA
TGACTGGTTTAAAATCGCCGATAAGGTGGTGGACTATAAATCGGAAACCGATGAGGTCACCCCGAAATTTGACGAGAAAA
ATGTTACCCATATCAGGCTTGTTTGCACTCAGGGCACGGTTAACCTGCATAAGATCGTGCTGCACATGAGTGATGGTTCC
GATAAAGAGGTGGATAACCTCGGCGTGCTCACCGATGGTATGTCCAGTCGGGTGATCAGTGTGCCCAAGGGGGACGCCAA
GCTGAAAAAAATCTCCCTTAAATACGACTCTGTGGGCAGCAAGGAAATGGCGCTGCTTGGACTGTCGAAAAAAGCCCATG
TGGATGTGATGGGCAAGGATGATGACAAAGATAAATCGGAATGA

Upstream 100 bases:

>100_bases
GAGCGATATAAGCTTTTGGAGGCAACCTCTGGGGCACCGGCGCTCAGGCTTATGCCATAATCAGGCTGTTTTGATTGGTT
ATTTCAGGAGGAAATATCTC

Downstream 100 bases:

>100_bases
ACCAACGCCCGATTGCCGGTGTTTTGTTTAAGTTTGTAATATCGATTTCCTGCTCTCAGCCTGCCACCTGGCTGGCTGAG
ACTTGTAAGTTCTGCTCATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MNFRVSSLLAVSLSLCGALFANAALADDWFKIADKVVDYKSETDEVTPKFDEKNVTHIRLVCTQGTVNLHKIVLHMSDGS
DKEVDNLGVLTDGMSSRVISVPKGDAKLKKISLKYDSVGSKEMALLGLSKKAHVDVMGKDDDKDKSE

Sequences:

>Translated_147_residues
MNFRVSSLLAVSLSLCGALFANAALADDWFKIADKVVDYKSETDEVTPKFDEKNVTHIRLVCTQGTVNLHKIVLHMSDGS
DKEVDNLGVLTDGMSSRVISVPKGDAKLKKISLKYDSVGSKEMALLGLSKKAHVDVMGKDDDKDKSE
>Mature_147_residues
MNFRVSSLLAVSLSLCGALFANAALADDWFKIADKVVDYKSETDEVTPKFDEKNVTHIRLVCTQGTVNLHKIVLHMSDGS
DKEVDNLGVLTDGMSSRVISVPKGDAKLKKISLKYDSVGSKEMALLGLSKKAHVDVMGKDDDKDKSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16030; Mature: 16030

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFRVSSLLAVSLSLCGALFANAALADDWFKIADKVVDYKSETDEVTPKFDEKNVTHIRL
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEE
VCTQGTVNLHKIVLHMSDGSDKEVDNLGVLTDGMSSRVISVPKGDAKLKKISLKYDSVGS
EEECCCCEEEEEEEECCCCCCCCCCCCCEEECCCCCCEEECCCCCCEEEEEEEEECCCCC
KEMALLGLSKKAHVDVMGKDDDKDKSE
CEEEEEECCCCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MNFRVSSLLAVSLSLCGALFANAALADDWFKIADKVVDYKSETDEVTPKFDEKNVTHIRL
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEE
VCTQGTVNLHKIVLHMSDGSDKEVDNLGVLTDGMSSRVISVPKGDAKLKKISLKYDSVGS
EEECCCCEEEEEEEECCCCCCCCCCCCCEEECCCCCCEEECCCCCCEEEEEEEEECCCCC
KEMALLGLSKKAHVDVMGKDDDKDKSE
CEEEEEECCCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA