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The map label for this gene is ybiT [H]

Identifier: 119774523

GI number: 119774523

Start: 1677573

End: 1679168

Strand: Direct

Name: ybiT [H]

Synonym: Sama_1386

Alternate gene names: 119774523

Gene position: 1677573-1679168 (Clockwise)

Preceding gene: 119774520

Following gene: 119774524

Centisome position: 38.96

GC content: 53.57

Gene sequence:

>1596_bases
GTGATCACAACCGCCAATATCACCATGCAGTTCGGCGCCAAGCCACTGTTTGAAAACATCTCCGTCAAGTTCGGTGACGG
CAACCGCTACGGCCTTATCGGTGCCAATGGTTGCGGTAAATCCACCTTTATGAAGATCCTCGCCGGTGAACTTGAGCCGT
CCGGCGGTAACGTTCATCTGGATCCCAACGAGCGTCTGGGTAAGCTGAATCAGGATCAGTTCGCCTACGAAGAGTTCAGC
GTAATCGATACCGTTATCATGGGCCACAAAGAACTGTGGGCTGTTAAGCAGGAACGTGACCGTATCTATTCTTTGCCTGA
AATGAGTGAAGAAGACGGCATCAAGGTAGCCGAGCTTGAAATGGAATTTGCCGAAATGGACGGTTACACCGCCGAGAGCC
GTGCCGGTGAACTGCTGCTGGGTGTGGGTATTCCTCTGGAGCAACATTTTGGTCCTATGAGCGAAGTGGCCCCAGGCTGG
AAACTGCGTGTGCTGCTGGCACAGGCACTGTTCTCAGACCCGGACGTGCTTCTGCTTGACGAACCAACCAACAACCTGGA
CATCGATACCATCCGTTGGTTGCAGGACATGCTGAATCAGCGTAACAGCACCATGATTATCATTTCACACGACCGTTACT
TCCTGAACTCTGTGTGTACCCACATGGCGGATCTGGACTACGGCGAGCTGCGTGTGTATCCGGGCAACTACGATGAATAC
ATGATGGCAGCCAGCCAGGCCCGTGAGCGTTTGCTGGCCGACAACGCCAAGAAGAAGGCACAGATTGCAGAGCTGCAAAC
CTTCGTGGCGCGTTTCTCTGCCAACGCCTCCAAGGCCAAGCAGGCCACCTCCCGTGCCCGCCAGATTGACAAGATCAAGC
TGGACGAAGTGAAGGCTTCCAGCCGTGTGAACCCCTACATCCGTTTCGAGCAGGAAAAGAAACTGTTCCGTAACGCGCTG
GTGGTAGAGAACCTGAGCAAGGGCTTCGATAGCAAGCCGCTGTTCCAAAACTTCAACATGATTGCCGAAGTGGGTGAGCG
TATCGCCATCCTCGGTGAGAACGGTGCCGGTAAAACCACCCTGGTGCGTACCCTCATCCATGAATTGCCACAGGACGAAG
GCACTATTCACTGGTCTGAGAATGCCGCTATCGGTTACTACGCCCAGGATCACGCCAGTGATTTTGAAAACGATTTGACC
GTATTCGACTGGATGAGCCAGTGGAAGAAAGAAGGCGACGATGAACAGGCCGTACGCGGTATTCTGGGTCGTATGCTGTT
TGGCGCCGACGACATCAGAAAGTCGGTCAAGGTACTGTCGGGTGGTGAGCAGGGCCGCATGCTGTTTGGCAAGATGATCA
TGCAAAAGCCCAATATCCTGGTGATGGACGAACCCACTAACCACCTGGATATGGAATCTATCGAGTCGCTCAACAACGCG
CTGGAAATGTACGAAGGTACGCTGTTTTTCGTGTCCCACGACCGCGCCTTTGTCAGCTCGCTGGCCAACCGCATTATCGA
AATCACCGCCAATGGCGTGAATGACTTCAAAGGAACTTACGACGAGTTCCTGCGCAGTAAAGGCATCGAAGGCTAA

Upstream 100 bases:

>100_bases
TTATAGTACCGCGCTTTATCAGAGGGTAGGCTTAAACACTGCCCTTGGGATTTTTGCCGCAGGCGTCTGCCTCGGCCCTC
AGACAAACGGAAACCAGCCC

Downstream 100 bases:

>100_bases
CCGACGCTTCAGTGCGAAAAGCCGGCAATTTGCCGGCTTTTTTGTGGCTGCAGCAAAGTCGCCAGTGTAAAAGTTGCTTG
TTTCTTTAGCCTTTTTGGCC

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 531; Mature: 531

Protein sequence:

>531_residues
MITTANITMQFGAKPLFENISVKFGDGNRYGLIGANGCGKSTFMKILAGELEPSGGNVHLDPNERLGKLNQDQFAYEEFS
VIDTVIMGHKELWAVKQERDRIYSLPEMSEEDGIKVAELEMEFAEMDGYTAESRAGELLLGVGIPLEQHFGPMSEVAPGW
KLRVLLAQALFSDPDVLLLDEPTNNLDIDTIRWLQDMLNQRNSTMIIISHDRYFLNSVCTHMADLDYGELRVYPGNYDEY
MMAASQARERLLADNAKKKAQIAELQTFVARFSANASKAKQATSRARQIDKIKLDEVKASSRVNPYIRFEQEKKLFRNAL
VVENLSKGFDSKPLFQNFNMIAEVGERIAILGENGAGKTTLVRTLIHELPQDEGTIHWSENAAIGYYAQDHASDFENDLT
VFDWMSQWKKEGDDEQAVRGILGRMLFGADDIRKSVKVLSGGEQGRMLFGKMIMQKPNILVMDEPTNHLDMESIESLNNA
LEMYEGTLFFVSHDRAFVSSLANRIIEITANGVNDFKGTYDEFLRSKGIEG

Sequences:

>Translated_531_residues
MITTANITMQFGAKPLFENISVKFGDGNRYGLIGANGCGKSTFMKILAGELEPSGGNVHLDPNERLGKLNQDQFAYEEFS
VIDTVIMGHKELWAVKQERDRIYSLPEMSEEDGIKVAELEMEFAEMDGYTAESRAGELLLGVGIPLEQHFGPMSEVAPGW
KLRVLLAQALFSDPDVLLLDEPTNNLDIDTIRWLQDMLNQRNSTMIIISHDRYFLNSVCTHMADLDYGELRVYPGNYDEY
MMAASQARERLLADNAKKKAQIAELQTFVARFSANASKAKQATSRARQIDKIKLDEVKASSRVNPYIRFEQEKKLFRNAL
VVENLSKGFDSKPLFQNFNMIAEVGERIAILGENGAGKTTLVRTLIHELPQDEGTIHWSENAAIGYYAQDHASDFENDLT
VFDWMSQWKKEGDDEQAVRGILGRMLFGADDIRKSVKVLSGGEQGRMLFGKMIMQKPNILVMDEPTNHLDMESIESLNNA
LEMYEGTLFFVSHDRAFVSSLANRIIEITANGVNDFKGTYDEFLRSKGIEG
>Mature_531_residues
MITTANITMQFGAKPLFENISVKFGDGNRYGLIGANGCGKSTFMKILAGELEPSGGNVHLDPNERLGKLNQDQFAYEEFS
VIDTVIMGHKELWAVKQERDRIYSLPEMSEEDGIKVAELEMEFAEMDGYTAESRAGELLLGVGIPLEQHFGPMSEVAPGW
KLRVLLAQALFSDPDVLLLDEPTNNLDIDTIRWLQDMLNQRNSTMIIISHDRYFLNSVCTHMADLDYGELRVYPGNYDEY
MMAASQARERLLADNAKKKAQIAELQTFVARFSANASKAKQATSRARQIDKIKLDEVKASSRVNPYIRFEQEKKLFRNAL
VVENLSKGFDSKPLFQNFNMIAEVGERIAILGENGAGKTTLVRTLIHELPQDEGTIHWSENAAIGYYAQDHASDFENDLT
VFDWMSQWKKEGDDEQAVRGILGRMLFGADDIRKSVKVLSGGEQGRMLFGKMIMQKPNILVMDEPTNHLDMESIESLNNA
LEMYEGTLFFVSHDRAFVSSLANRIIEITANGVNDFKGTYDEFLRSKGIEG

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=531, Percent_Identity=30.8851224105461, Blast_Score=263, Evalue=3e-70,
Organism=Homo sapiens, GI10947137, Length=534, Percent_Identity=29.0262172284644, Blast_Score=241, Evalue=2e-63,
Organism=Homo sapiens, GI27881506, Length=534, Percent_Identity=29.0262172284644, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI10947135, Length=542, Percent_Identity=28.7822878228782, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI69354671, Length=542, Percent_Identity=28.7822878228782, Blast_Score=206, Evalue=4e-53,
Organism=Escherichia coli, GI1787041, Length=530, Percent_Identity=79.622641509434, Blast_Score=907, Evalue=0.0,
Organism=Escherichia coli, GI1789751, Length=527, Percent_Identity=32.258064516129, Blast_Score=289, Evalue=3e-79,
Organism=Escherichia coli, GI1787182, Length=545, Percent_Identity=30.8256880733945, Blast_Score=245, Evalue=4e-66,
Organism=Escherichia coli, GI2367384, Length=521, Percent_Identity=30.1343570057582, Blast_Score=218, Evalue=6e-58,
Organism=Escherichia coli, GI1786975, Length=520, Percent_Identity=23.8461538461538, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI1788165, Length=218, Percent_Identity=27.9816513761468, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1786398, Length=238, Percent_Identity=30.2521008403361, Blast_Score=79, Evalue=9e-16,
Organism=Escherichia coli, GI87081709, Length=261, Percent_Identity=26.8199233716475, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787029, Length=234, Percent_Identity=26.9230769230769, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1789672, Length=211, Percent_Identity=27.0142180094787, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1789891, Length=225, Percent_Identity=25.3333333333333, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1788506, Length=232, Percent_Identity=25.4310344827586, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI48994943, Length=245, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1790525, Length=228, Percent_Identity=25.4385964912281, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI87081834, Length=215, Percent_Identity=27.906976744186, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI87081791, Length=238, Percent_Identity=24.3697478991597, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1786319, Length=233, Percent_Identity=23.175965665236, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1788761, Length=211, Percent_Identity=24.1706161137441, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=537, Percent_Identity=29.0502793296089, Blast_Score=245, Evalue=5e-65,
Organism=Caenorhabditis elegans, GI17553372, Length=541, Percent_Identity=30.8687615526802, Blast_Score=244, Evalue=7e-65,
Organism=Caenorhabditis elegans, GI17559834, Length=543, Percent_Identity=27.6243093922652, Blast_Score=225, Evalue=4e-59,
Organism=Saccharomyces cerevisiae, GI6320874, Length=537, Percent_Identity=30.3538175046555, Blast_Score=261, Evalue=3e-70,
Organism=Saccharomyces cerevisiae, GI6321121, Length=534, Percent_Identity=30.1498127340824, Blast_Score=239, Evalue=9e-64,
Organism=Saccharomyces cerevisiae, GI6323278, Length=422, Percent_Identity=27.0142180094787, Blast_Score=132, Evalue=9e-32,
Organism=Saccharomyces cerevisiae, GI6325030, Length=424, Percent_Identity=25.4716981132075, Blast_Score=124, Evalue=3e-29,
Organism=Saccharomyces cerevisiae, GI6324314, Length=247, Percent_Identity=29.1497975708502, Blast_Score=107, Evalue=7e-24,
Organism=Drosophila melanogaster, GI24666836, Length=537, Percent_Identity=31.6573556797021, Blast_Score=266, Evalue=2e-71,
Organism=Drosophila melanogaster, GI24642252, Length=541, Percent_Identity=29.3900184842884, Blast_Score=243, Evalue=3e-64,
Organism=Drosophila melanogaster, GI18859989, Length=541, Percent_Identity=29.3900184842884, Blast_Score=243, Evalue=3e-64,
Organism=Drosophila melanogaster, GI24641342, Length=541, Percent_Identity=28.8354898336414, Blast_Score=229, Evalue=3e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 59754; Mature: 59754

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITTANITMQFGAKPLFENISVKFGDGNRYGLIGANGCGKSTFMKILAGELEPSGGNVHL
CEEEEEEEEECCCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEE
DPNERLGKLNQDQFAYEEFSVIDTVIMGHKELWAVKQERDRIYSLPEMSEEDGIKVAELE
CCHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE
MEFAEMDGYTAESRAGELLLGVGIPLEQHFGPMSEVAPGWKLRVLLAQALFSDPDVLLLD
HHHHHCCCCCCCCCCCCEEEECCCCHHHHCCCHHHHCCCHHHHHHHHHHHHCCCCEEEEE
EPTNNLDIDTIRWLQDMLNQRNSTMIIISHDRYFLNSVCTHMADLDYGELRVYPGNYDEY
CCCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCCHHH
MMAASQARERLLADNAKKKAQIAELQTFVARFSANASKAKQATSRARQIDKIKLDEVKAS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHC
SRVNPYIRFEQEKKLFRNALVVENLSKGFDSKPLFQNFNMIAEVGERIAILGENGAGKTT
CCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCHHH
LVRTLIHELPQDEGTIHWSENAAIGYYAQDHASDFENDLTVFDWMSQWKKEGDDEQAVRG
HHHHHHHHCCCCCCEEEECCCCEEEEEECHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHH
ILGRMLFGADDIRKSVKVLSGGEQGRMLFGKMIMQKPNILVMDEPTNHLDMESIESLNNA
HHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHH
LEMYEGTLFFVSHDRAFVSSLANRIIEITANGVNDFKGTYDEFLRSKGIEG
HHHHCCEEEEEECCHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MITTANITMQFGAKPLFENISVKFGDGNRYGLIGANGCGKSTFMKILAGELEPSGGNVHL
CEEEEEEEEECCCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEE
DPNERLGKLNQDQFAYEEFSVIDTVIMGHKELWAVKQERDRIYSLPEMSEEDGIKVAELE
CCHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE
MEFAEMDGYTAESRAGELLLGVGIPLEQHFGPMSEVAPGWKLRVLLAQALFSDPDVLLLD
HHHHHCCCCCCCCCCCCEEEECCCCHHHHCCCHHHHCCCHHHHHHHHHHHHCCCCEEEEE
EPTNNLDIDTIRWLQDMLNQRNSTMIIISHDRYFLNSVCTHMADLDYGELRVYPGNYDEY
CCCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCCHHH
MMAASQARERLLADNAKKKAQIAELQTFVARFSANASKAKQATSRARQIDKIKLDEVKAS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHC
SRVNPYIRFEQEKKLFRNALVVENLSKGFDSKPLFQNFNMIAEVGERIAILGENGAGKTT
CCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCHHH
LVRTLIHELPQDEGTIHWSENAAIGYYAQDHASDFENDLTVFDWMSQWKKEGDDEQAVRG
HHHHHHHHCCCCCCEEEECCCCEEEEEECHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHH
ILGRMLFGADDIRKSVKVLSGGEQGRMLFGKMIMQKPNILVMDEPTNHLDMESIESLNNA
HHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHH
LEMYEGTLFFVSHDRAFVSSLANRIIEITANGVNDFKGTYDEFLRSKGIEG
HHHHCCEEEEEECCHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]