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The map label for this gene is nagZ [H]

Identifier: 119774463

GI number: 119774463

Start: 1615624

End: 1616649

Strand: Direct

Name: nagZ [H]

Synonym: Sama_1326

Alternate gene names: 119774463

Gene position: 1615624-1616649 (Clockwise)

Preceding gene: 119774461

Following gene: 119774464

Centisome position: 37.52

GC content: 54.39

Gene sequence:

>1026_bases
ATGGGCTTTTTGATGCTTGATATTGCAGGCACCCAACTTAAGCGTGAAGAAGAAGCCTTATTGGCTTCCCCCATGACTGG
CGGTCTTATTCTGTTCAGCCGTAACTTTGAAAATCGCGCCCAGTTAAATGCCCTGATAGCGTCCGTTAGAAGGGTACGCT
CCGACCTCCTTATTGCAGTCGATCATGAAGGTGGCAGGGTTCAGCGGTTTCGCGAGGGATTCACCCAAATTCCTGCGATG
GGCGACATATTGCCAGCGGCAGGCCAGGATTTAGGGTTGGCGAAACGCTGGGCCACTGAGCTGGGCTTTCTGATGGCTGT
GGAGCTACTTGCCAGTGATATTGATTTAAGCTTTGCCCCCGTGCTGGATGTCAATGGGGTAAGTGACGTGATTGGCAGGC
GAGCATTCAGCGCCAATCCAGATGAGATTACCGCGCTGGCTGATGCCTTTATCCGCGGCATGGACAGTGCTGGCATGAGG
GCTGTGGGTAAGCATTTCCCCGGTCATGGCAGCGTTAAAGCCGACTCCCATGTGGCCATGCCTGTGGATAGCCGCGAGGC
AGGTGAAATCCTGAACTTTGATATGCAGCCGTTTAAGCAGCTTATTGATGCTCAGCGTCTCGACGGTGTGATGCCTGCCC
ATGTGGTGTATGACAAACTGTGTCCCAATCCCGCCGGATTTTCATCTTTCTGGTTACAGGAAAAGCTCAGAGGTGAGCTT
GGATTTGACGGCGTGATATTTTCCGATGATCTGGGGATGGAAGGTGCCGCTTTTGCTGGCGATTATCCGGCCCGGGCCCG
TGCGGCGCTGGCGGCAGGTTGTGACATGATTTTGGTCTGCAACAACCGTGACGGGGCCTTGTCGGTATTGGCCGCTCAGG
CGTCACTGAATGAGATTGACGGCAGGGCGCGCCGCAATGCCGCCACACTGAGGCCTGATCCAATTAAAGCCATCAGGGCA
TTGGATAACCACGAACGTTGGGAAAAAGCCCGGGAGCTGGCCTTGTCTATTGGTTATCAGCCTTAG

Upstream 100 bases:

>100_bases
TGCCGTTAAGATAGCGTTATCGCTGTATGGATTTTTATTGAGCATGTATTGGCTCTGCTCAACTGGCCTGATATGTGATG
AATTTTTATAGGGAGAATCT

Downstream 100 bases:

>100_bases
TTCTGTCCGTCCAAGTTCGCAAAGTTTGCGCATTATTTGATGATGCGCAAGCTTTTGTGCCCCTTGCCCTGTTAGGGTTT
AGCTATCACAGCACAGCGGG

Product: beta-hexosaminidase

Products: NA

Alternate protein names: Beta-N-acetylhexosaminidase; N-acetyl-beta-glucosaminidase [H]

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MGFLMLDIAGTQLKREEEALLASPMTGGLILFSRNFENRAQLNALIASVRRVRSDLLIAVDHEGGRVQRFREGFTQIPAM
GDILPAAGQDLGLAKRWATELGFLMAVELLASDIDLSFAPVLDVNGVSDVIGRRAFSANPDEITALADAFIRGMDSAGMR
AVGKHFPGHGSVKADSHVAMPVDSREAGEILNFDMQPFKQLIDAQRLDGVMPAHVVYDKLCPNPAGFSSFWLQEKLRGEL
GFDGVIFSDDLGMEGAAFAGDYPARARAALAAGCDMILVCNNRDGALSVLAAQASLNEIDGRARRNAATLRPDPIKAIRA
LDNHERWEKARELALSIGYQP

Sequences:

>Translated_341_residues
MGFLMLDIAGTQLKREEEALLASPMTGGLILFSRNFENRAQLNALIASVRRVRSDLLIAVDHEGGRVQRFREGFTQIPAM
GDILPAAGQDLGLAKRWATELGFLMAVELLASDIDLSFAPVLDVNGVSDVIGRRAFSANPDEITALADAFIRGMDSAGMR
AVGKHFPGHGSVKADSHVAMPVDSREAGEILNFDMQPFKQLIDAQRLDGVMPAHVVYDKLCPNPAGFSSFWLQEKLRGEL
GFDGVIFSDDLGMEGAAFAGDYPARARAALAAGCDMILVCNNRDGALSVLAAQASLNEIDGRARRNAATLRPDPIKAIRA
LDNHERWEKARELALSIGYQP
>Mature_340_residues
GFLMLDIAGTQLKREEEALLASPMTGGLILFSRNFENRAQLNALIASVRRVRSDLLIAVDHEGGRVQRFREGFTQIPAMG
DILPAAGQDLGLAKRWATELGFLMAVELLASDIDLSFAPVLDVNGVSDVIGRRAFSANPDEITALADAFIRGMDSAGMRA
VGKHFPGHGSVKADSHVAMPVDSREAGEILNFDMQPFKQLIDAQRLDGVMPAHVVYDKLCPNPAGFSSFWLQEKLRGELG
FDGVIFSDDLGMEGAAFAGDYPARARAALAAGCDMILVCNNRDGALSVLAAQASLNEIDGRARRNAATLRPDPIKAIRAL
DNHERWEKARELALSIGYQP

Specific function: Cleaves GlcNAc linked beta-1,4 to MurNAc tripeptides [H]

COG id: COG1472

COG function: function code G; Beta-glucosidase-related glycosidases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 3 family. NagZ subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787350, Length=340, Percent_Identity=50.2941176470588, Blast_Score=318, Evalue=3e-88,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022956
- InterPro:   IPR019800
- InterPro:   IPR001764
- InterPro:   IPR017853 [H]

Pfam domain/function: PF00933 Glyco_hydro_3 [H]

EC number: =3.2.1.52 [H]

Molecular weight: Translated: 36888; Mature: 36756

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFLMLDIAGTQLKREEEALLASPMTGGLILFSRNFENRAQLNALIASVRRVRSDLLIAV
CCEEEEEECCCHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCEEEEE
DHEGGRVQRFREGFTQIPAMGDILPAAGQDLGLAKRWATELGFLMAVELLASDIDLSFAP
ECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEC
VLDVNGVSDVIGRRAFSANPDEITALADAFIRGMDSAGMRAVGKHFPGHGSVKADSHVAM
EEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCEEEC
PVDSREAGEILNFDMQPFKQLIDAQRLDGVMPAHVVYDKLCPNPAGFSSFWLQEKLRGEL
CCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCC
GFDGVIFSDDLGMEGAAFAGDYPARARAALAAGCDMILVCNNRDGALSVLAAQASLNEID
CCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCEEHHHHHHHHHHHC
GRARRNAATLRPDPIKAIRALDNHERWEKARELALSIGYQP
CHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GFLMLDIAGTQLKREEEALLASPMTGGLILFSRNFENRAQLNALIASVRRVRSDLLIAV
CEEEEEECCCHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCEEEEE
DHEGGRVQRFREGFTQIPAMGDILPAAGQDLGLAKRWATELGFLMAVELLASDIDLSFAP
ECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEC
VLDVNGVSDVIGRRAFSANPDEITALADAFIRGMDSAGMRAVGKHFPGHGSVKADSHVAM
EEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCEEEC
PVDSREAGEILNFDMQPFKQLIDAQRLDGVMPAHVVYDKLCPNPAGFSSFWLQEKLRGEL
CCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCC
GFDGVIFSDDLGMEGAAFAGDYPARARAALAAGCDMILVCNNRDGALSVLAAQASLNEID
CCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCEEHHHHHHHHHHHC
GRARRNAATLRPDPIKAIRALDNHERWEKARELALSIGYQP
CHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA