Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774126

Identifier: 119774126

GI number: 119774126

Start: 1197717

End: 1197881

Strand: Reverse

Name: 119774126

Synonym: Sama_0989

Alternate gene names: NA

Gene position: 1197881-1197717 (Counterclockwise)

Preceding gene: 119774127

Following gene: 119774125

Centisome position: 27.82

GC content: 54.55

Gene sequence:

>165_bases
ATGTCACACCCCACTCAATCCCCCAAGGAGAGCAGAAGCCGGGAGCTTAAGGGCTTAGGCTTTATTGTTTTTCTGCTTTT
TCCTGCACTTACCGTCACCTTTATCAGCCTCTACGGTTTGGCGCTCTGGGTTTACCAGGCCGTCACCGGCGTTGCGCCCC
ACTGA

Upstream 100 bases:

>100_bases
ATATTTTTACATAATTTATCAAAACCCATTCACGCCAGCCCGCATGGCCATTCACAACCTTTTTTTATAGTGGACGCATC
AAAAAAACGGAGATGCGTCC

Downstream 100 bases:

>100_bases
TTTTCGAGGATATTGCATATGAAATGGTTCTCTTCTCTCAGACAAACCCTCGGCAAGCCCGCACTCTCCCTGAGTCTGGG
CTTTATTGCCATCAGCGCCT

Product: warning TorE protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 54; Mature: 53

Protein sequence:

>54_residues
MSHPTQSPKESRSRELKGLGFIVFLLFPALTVTFISLYGLALWVYQAVTGVAPH

Sequences:

>Translated_54_residues
MSHPTQSPKESRSRELKGLGFIVFLLFPALTVTFISLYGLALWVYQAVTGVAPH
>Mature_53_residues
SHPTQSPKESRSRELKGLGFIVFLLFPALTVTFISLYGLALWVYQAVTGVAPH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5976; Mature: 5845

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHPTQSPKESRSRELKGLGFIVFLLFPALTVTFISLYGLALWVYQAVTGVAPH
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SHPTQSPKESRSRELKGLGFIVFLLFPALTVTFISLYGLALWVYQAVTGVAPH
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA