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The map label for this gene is 119774071

Identifier: 119774071

GI number: 119774071

Start: 1128312

End: 1128824

Strand: Reverse

Name: 119774071

Synonym: Sama_0934

Alternate gene names: NA

Gene position: 1128824-1128312 (Counterclockwise)

Preceding gene: 119774074

Following gene: 119774070

Centisome position: 26.21

GC content: 45.03

Gene sequence:

>513_bases
ATGAAACATCCGCACGGATTTACGCTCATAGAGCTAATGATAACAATCGCGATTGCAACCATATTGCTTTCTATCGGGCT
CCCTCAACTTACTGAGTTACATCAAGCTAACAGGGCAGATTCCGCGATAAAAGTCATTCAACAAACCTTGCAATACGCCA
GAAATACAGCCATCAGCTATGGGCTTCGCGTGACAGTATGCCCTCTGAAGGATAACCAATGCACGAATGACTGGCACCAA
GGTCTGACAGTATTCACCGACTCCGGCGTTAGTAATCAGTTAGATGGCAATGACATATTACTGATGCAAACAGGCTCTTT
TGATAGCAATGACTTTATGTTCTATAACCGCTCAGCTGCACGCTTTCTGCCTGATGGTCTTGCTTCGGGCAGCAACGGAA
CGTTCAAGTACTGCCCAGGCTCAGCAGACAGCCCTTATTCCAAAGCCGTTATAATTAATCAAGCAGGCAGAGTACGCTTC
TCGACAGATAAAAATATCAATTGCACTCAATAA

Upstream 100 bases:

>100_bases
CACGTCAGTTTGAACCAACTCTTCTATACTCAATTGGTTGGGTCGTAATCGAGTTTAGGTCATTGCAGGACGCATTGACG
ACATACAGCAAGGATTTGCT

Downstream 100 bases:

>100_bases
TGCGACATCTAAGCTAGGGTAACTGTTAAATCGACACCGAACCAGTAGAACTCTTTTCTACTGAAATTGGGCGACTTCTC
GCTTATACTTTCAAACAGTA

Product: type IV pilus biogenesis protein

Products: NA

Alternate protein names: Methylation Site Containing Protein; Prepilin-Type Cleavage/Methylation-Like Protein; Type IV Pilus Assembly Protein Fimt; Tfp Pilus Assembly Protein FimT; General Secretion Pathway Protein H

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MKHPHGFTLIELMITIAIATILLSIGLPQLTELHQANRADSAIKVIQQTLQYARNTAISYGLRVTVCPLKDNQCTNDWHQ
GLTVFTDSGVSNQLDGNDILLMQTGSFDSNDFMFYNRSAARFLPDGLASGSNGTFKYCPGSADSPYSKAVIINQAGRVRF
STDKNINCTQ

Sequences:

>Translated_170_residues
MKHPHGFTLIELMITIAIATILLSIGLPQLTELHQANRADSAIKVIQQTLQYARNTAISYGLRVTVCPLKDNQCTNDWHQ
GLTVFTDSGVSNQLDGNDILLMQTGSFDSNDFMFYNRSAARFLPDGLASGSNGTFKYCPGSADSPYSKAVIINQAGRVRF
STDKNINCTQ
>Mature_170_residues
MKHPHGFTLIELMITIAIATILLSIGLPQLTELHQANRADSAIKVIQQTLQYARNTAISYGLRVTVCPLKDNQCTNDWHQ
GLTVFTDSGVSNQLDGNDILLMQTGSFDSNDFMFYNRSAARFLPDGLASGSNGTFKYCPGSADSPYSKAVIINQAGRVRF
STDKNINCTQ

Specific function: Unknown

COG id: COG4970

COG function: function code NU; Tfp pilus assembly protein FimT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18650; Mature: 18650

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHPHGFTLIELMITIAIATILLSIGLPQLTELHQANRADSAIKVIQQTLQYARNTAISY
CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEC
GLRVTVCPLKDNQCTNDWHQGLTVFTDSGVSNQLDGNDILLMQTGSFDSNDFMFYNRSAA
CCEEEEEECCCCCCCCHHHCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEECCHH
RFLPDGLASGSNGTFKYCPGSADSPYSKAVIINQAGRVRFSTDKNINCTQ
HHCCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCEEEECCCCCCCCCC
>Mature Secondary Structure
MKHPHGFTLIELMITIAIATILLSIGLPQLTELHQANRADSAIKVIQQTLQYARNTAISY
CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEC
GLRVTVCPLKDNQCTNDWHQGLTVFTDSGVSNQLDGNDILLMQTGSFDSNDFMFYNRSAA
CCEEEEEECCCCCCCCHHHCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEECCHH
RFLPDGLASGSNGTFKYCPGSADSPYSKAVIINQAGRVRFSTDKNINCTQ
HHCCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA