BacMap

Definition	Shewanella amazonensis SB2B chromosome, complete genome.
Accession	NC_008700
Length	4,306,142

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The map label for this gene is rhlE [H]

Identifier: 119773945

GI number: 119773945

Start: 991771

End: 993069

Strand: Reverse

Name: rhlE [H]

Synonym: Sama_0808

Alternate gene names: 119773945

Gene position: 993069-991771 (Counterclockwise)

Preceding gene: 119773957

Following gene: 119773944

Centisome position: 23.06

GC content: 54.89

Gene sequence:

>1299_bases
ATGAAATTCGAATCCTACAGTTTTGCCCCCGAAATACTGCAAGCCCTTGCCGAATGCGGTTATGAAACCATGACCCCCAT
TCAACGGCTGGCCATTCCCCCTGTCCGTCGCGGCCAGGACGTATTGGCTTCTGCCCAAACGGGAACCGGGAAAACTGCGG
CTTTCGCATTGCCAATCCTGCAAAAGCTGCTGGACACGCCCAAGGCCAGAGAAGCGACCAAAGCCCGCGCGCTTATTCTT
GCTCCAACCCGCGAGCTGACAGAGCAGATTGCCAACAATATCAAAGCCTATGCCAAACATCTTGAACTGGCCGTTACCAC
GGTATTCGGTGGCGGAAAAACCGATGTTCAGGCGCAAAAGCTGCGTAAAGGCACAGATATCATAGTGGCCACGCCGGGGC
GCTTACTCGAACACTTGCTGGCGGGTAACCTGTCGTTGGCAGCCGTTGAATTTTTGGTGTTGGATGAAGCCGACCGTATG
CTGGACATGGGCTTTATCGCCGATATCCAAAAGCTCATCCAGGCCTGTAATAAAGAGCGCCAGACCCTGATGTTCTCGGC
CACCTTCTCCGGTGGAGTGCGCAAGCTTGCCGATGAGATCATGAAAAAGCACACAGTACTGACCGCCGACAGACACAACA
CTGCCGCTACAACCGTGAGCCAGGTAGTGTACCCGGTGGAGCAGCGCCGCAAACGCGAACTCTTGTCTGAACTCATTGGC
CGTAAAAACTGGCAACGGGTGCTGGTATTCTCGGCGACCCGTGAAGACTGTGAAAAACTTACCGAAGAACTGAACCTCGA
CGGCATCCCAAGCGCGGTGATCCACAGCGAAAAAGCCCAGGGCACCCGCAGAAGAGCCCTGAAAGACTTTACCGAAGGCA
AAATTCGGGTGCTGGTATCCACTGAAGTGGCTGCCCGCGGTCTGGATATCCCGGACCTTGAATATGTGGTGAACTTCGAC
CTGCCCTTCCTGCCAGAAGACTATGTGCACAGGGTTGGCCGCACAGGCCGTGCTGGAAAGAGTGGCGTTGCCATCAGTTT
TGTCAGCCGCGAAGAAGAGCGCACCCTGGCCGACATTGAAAAACTCATTGGCCAGCGTCTCAAGCGCATCGTGATGCCGG
GCTATGAAGTGTCCAACCGTGACCTCTTGCTCAAGCAGTTGCAAAAGCGTCGCAGCTTTGCGAAAAAGACCCGGGTCGAA
AGTGACGCCATTGCTCAGGTTGCCGCCGAAAAGAGCATGGCCGGACGCCGCGTTAAGGTGAAAGTCGGTTCAACCGGCAA
CACCAAAAAAATCAAATAA

Upstream 100 bases:

>100_bases
CTGCTATACTTCGCGCCCCTTTGTGAAAAGGCATATTCCGACCAAGGTGCCTCACTTACAAAAAGCCCTTGTGAATCGTC
TATTTACGCCAGGAATCATC

Downstream 100 bases:

>100_bases
GCACGTACTGCGATTGATTCAACATAAAAGCGGCCTCTATGCCGCTTTTATTTTTTCTGCTGCACATTCACCTGAAAGAC
ATTGCTCCTGTCACCGGTCT

Product: DEAD/DEAH box helicase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MKFESYSFAPEILQALAECGYETMTPIQRLAIPPVRRGQDVLASAQTGTGKTAAFALPILQKLLDTPKAREATKARALIL
APTRELTEQIANNIKAYAKHLELAVTTVFGGGKTDVQAQKLRKGTDIIVATPGRLLEHLLAGNLSLAAVEFLVLDEADRM
LDMGFIADIQKLIQACNKERQTLMFSATFSGGVRKLADEIMKKHTVLTADRHNTAATTVSQVVYPVEQRRKRELLSELIG
RKNWQRVLVFSATREDCEKLTEELNLDGIPSAVIHSEKAQGTRRRALKDFTEGKIRVLVSTEVAARGLDIPDLEYVVNFD
LPFLPEDYVHRVGRTGRAGKSGVAISFVSREEERTLADIEKLIGQRLKRIVMPGYEVSNRDLLLKQLQKRRSFAKKTRVE
SDAIAQVAAEKSMAGRRVKVKVGSTGNTKKIK

Sequences:

>Translated_432_residues
MKFESYSFAPEILQALAECGYETMTPIQRLAIPPVRRGQDVLASAQTGTGKTAAFALPILQKLLDTPKAREATKARALIL
APTRELTEQIANNIKAYAKHLELAVTTVFGGGKTDVQAQKLRKGTDIIVATPGRLLEHLLAGNLSLAAVEFLVLDEADRM
LDMGFIADIQKLIQACNKERQTLMFSATFSGGVRKLADEIMKKHTVLTADRHNTAATTVSQVVYPVEQRRKRELLSELIG
RKNWQRVLVFSATREDCEKLTEELNLDGIPSAVIHSEKAQGTRRRALKDFTEGKIRVLVSTEVAARGLDIPDLEYVVNFD
LPFLPEDYVHRVGRTGRAGKSGVAISFVSREEERTLADIEKLIGQRLKRIVMPGYEVSNRDLLLKQLQKRRSFAKKTRVE
SDAIAQVAAEKSMAGRRVKVKVGSTGNTKKIK
>Mature_432_residues
MKFESYSFAPEILQALAECGYETMTPIQRLAIPPVRRGQDVLASAQTGTGKTAAFALPILQKLLDTPKAREATKARALIL
APTRELTEQIANNIKAYAKHLELAVTTVFGGGKTDVQAQKLRKGTDIIVATPGRLLEHLLAGNLSLAAVEFLVLDEADRM
LDMGFIADIQKLIQACNKERQTLMFSATFSGGVRKLADEIMKKHTVLTADRHNTAATTVSQVVYPVEQRRKRELLSELIG
RKNWQRVLVFSATREDCEKLTEELNLDGIPSAVIHSEKAQGTRRRALKDFTEGKIRVLVSTEVAARGLDIPDLEYVVNFD
LPFLPEDYVHRVGRTGRAGKSGVAISFVSREEERTLADIEKLIGQRLKRIVMPGYEVSNRDLLLKQLQKRRSFAKKTRVE
SDAIAQVAAEKSMAGRRVKVKVGSTGNTKKIK

Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI262118318, Length=412, Percent_Identity=36.6504854368932, Blast_Score=259, Evalue=3e-69,
Organism=Homo sapiens, GI216548263, Length=412, Percent_Identity=36.6504854368932, Blast_Score=259, Evalue=4e-69,
Organism=Homo sapiens, GI262231852, Length=412, Percent_Identity=36.6504854368932, Blast_Score=258, Evalue=5e-69,
Organism=Homo sapiens, GI13518015, Length=412, Percent_Identity=36.6504854368932, Blast_Score=258, Evalue=6e-69,
Organism=Homo sapiens, GI148613856, Length=381, Percent_Identity=35.1706036745407, Blast_Score=247, Evalue=2e-65,
Organism=Homo sapiens, GI38201710, Length=381, Percent_Identity=35.1706036745407, Blast_Score=247, Evalue=2e-65,
Organism=Homo sapiens, GI4758138, Length=365, Percent_Identity=35.3424657534247, Blast_Score=246, Evalue=3e-65,
Organism=Homo sapiens, GI222352149, Length=359, Percent_Identity=35.933147632312, Blast_Score=244, Evalue=9e-65,
Organism=Homo sapiens, GI41327771, Length=391, Percent_Identity=35.5498721227622, Blast_Score=241, Evalue=8e-64,
Organism=Homo sapiens, GI224593278, Length=391, Percent_Identity=36.0613810741688, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI41327773, Length=354, Percent_Identity=39.2655367231638, Blast_Score=236, Evalue=3e-62,
Organism=Homo sapiens, GI169881239, Length=361, Percent_Identity=38.2271468144044, Blast_Score=236, Evalue=3e-62,
Organism=Homo sapiens, GI13514809, Length=361, Percent_Identity=38.2271468144044, Blast_Score=236, Evalue=3e-62,
Organism=Homo sapiens, GI87196351, Length=361, Percent_Identity=38.2271468144044, Blast_Score=236, Evalue=4e-62,
Organism=Homo sapiens, GI301171475, Length=361, Percent_Identity=38.2271468144044, Blast_Score=236, Evalue=4e-62,
Organism=Homo sapiens, GI301171467, Length=361, Percent_Identity=38.2271468144044, Blast_Score=235, Evalue=5e-62,
Organism=Homo sapiens, GI21071032, Length=371, Percent_Identity=36.3881401617251, Blast_Score=232, Evalue=4e-61,
Organism=Homo sapiens, GI45446747, Length=368, Percent_Identity=34.5108695652174, Blast_Score=228, Evalue=1e-59,
Organism=Homo sapiens, GI45446743, Length=368, Percent_Identity=34.5108695652174, Blast_Score=228, Evalue=1e-59,
Organism=Homo sapiens, GI20149629, Length=386, Percent_Identity=34.1968911917098, Blast_Score=227, Evalue=1e-59,
Organism=Homo sapiens, GI31542656, Length=384, Percent_Identity=35.4166666666667, Blast_Score=226, Evalue=2e-59,
Organism=Homo sapiens, GI55749865, Length=364, Percent_Identity=33.2417582417582, Blast_Score=226, Evalue=4e-59,
Organism=Homo sapiens, GI188035877, Length=366, Percent_Identity=37.7049180327869, Blast_Score=223, Evalue=2e-58,
Organism=Homo sapiens, GI13129006, Length=384, Percent_Identity=34.375, Blast_Score=223, Evalue=3e-58,
Organism=Homo sapiens, GI50659095, Length=384, Percent_Identity=34.375, Blast_Score=219, Evalue=3e-57,
Organism=Homo sapiens, GI51094101, Length=368, Percent_Identity=36.4130434782609, Blast_Score=213, Evalue=2e-55,
Organism=Homo sapiens, GI164419743, Length=368, Percent_Identity=36.4130434782609, Blast_Score=213, Evalue=2e-55,
Organism=Homo sapiens, GI164664518, Length=370, Percent_Identity=32.972972972973, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI7661920, Length=371, Percent_Identity=32.6145552560647, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI41327776, Length=383, Percent_Identity=34.4647519582245, Blast_Score=207, Evalue=1e-53,
Organism=Homo sapiens, GI38327634, Length=352, Percent_Identity=36.9318181818182, Blast_Score=201, Evalue=9e-52,
Organism=Homo sapiens, GI38569503, Length=375, Percent_Identity=34.9333333333333, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI38569505, Length=375, Percent_Identity=34.9333333333333, Blast_Score=196, Evalue=5e-50,
Organism=Homo sapiens, GI4503529, Length=373, Percent_Identity=34.0482573726542, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI83700235, Length=373, Percent_Identity=33.7801608579088, Blast_Score=191, Evalue=8e-49,
Organism=Homo sapiens, GI21040371, Length=363, Percent_Identity=31.9559228650138, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI4758112, Length=363, Percent_Identity=30.8539944903581, Blast_Score=184, Evalue=2e-46,
Organism=Homo sapiens, GI18375623, Length=363, Percent_Identity=30.8539944903581, Blast_Score=184, Evalue=2e-46,
Organism=Homo sapiens, GI41327779, Length=362, Percent_Identity=34.8066298342541, Blast_Score=183, Evalue=3e-46,
Organism=Homo sapiens, GI17505907, Length=385, Percent_Identity=31.1688311688312, Blast_Score=170, Evalue=3e-42,
Organism=Homo sapiens, GI13514831, Length=350, Percent_Identity=31.7142857142857, Blast_Score=169, Evalue=3e-42,
Organism=Homo sapiens, GI9506931, Length=413, Percent_Identity=30.9927360774818, Blast_Score=168, Evalue=9e-42,
Organism=Homo sapiens, GI256223453, Length=363, Percent_Identity=30.8539944903581, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI164419732, Length=366, Percent_Identity=31.6939890710383, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI8922886, Length=386, Percent_Identity=31.6062176165803, Blast_Score=158, Evalue=8e-39,
Organism=Homo sapiens, GI154759257, Length=413, Percent_Identity=29.7820823244552, Blast_Score=158, Evalue=8e-39,
Organism=Homo sapiens, GI6005743, Length=386, Percent_Identity=31.3471502590674, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI62241022, Length=357, Percent_Identity=32.2128851540616, Blast_Score=147, Evalue=2e-35,
Organism=Homo sapiens, GI4826686, Length=345, Percent_Identity=31.304347826087, Blast_Score=145, Evalue=5e-35,
Organism=Homo sapiens, GI62241024, Length=352, Percent_Identity=31.8181818181818, Blast_Score=145, Evalue=6e-35,
Organism=Homo sapiens, GI256773275, Length=411, Percent_Identity=30.6569343065693, Blast_Score=143, Evalue=2e-34,
Organism=Homo sapiens, GI9966805, Length=307, Percent_Identity=31.2703583061889, Blast_Score=132, Evalue=7e-31,
Organism=Homo sapiens, GI20336298, Length=183, Percent_Identity=39.344262295082, Blast_Score=128, Evalue=9e-30,
Organism=Homo sapiens, GI284005309, Length=386, Percent_Identity=24.0932642487047, Blast_Score=74, Evalue=2e-13,
Organism=Escherichia coli, GI1787016, Length=377, Percent_Identity=53.0503978779841, Blast_Score=400, Evalue=1e-113,
Organism=Escherichia coli, GI87082221, Length=408, Percent_Identity=38.2352941176471, Blast_Score=273, Evalue=1e-74,
Organism=Escherichia coli, GI1790214, Length=371, Percent_Identity=39.8921832884097, Blast_Score=257, Evalue=8e-70,
Organism=Escherichia coli, GI1787605, Length=350, Percent_Identity=41.7142857142857, Blast_Score=254, Evalue=1e-68,
Organism=Escherichia coli, GI1788930, Length=333, Percent_Identity=41.1411411411411, Blast_Score=246, Evalue=2e-66,
Organism=Caenorhabditis elegans, GI115533224, Length=376, Percent_Identity=37.5, Blast_Score=255, Evalue=3e-68,
Organism=Caenorhabditis elegans, GI32565321, Length=391, Percent_Identity=37.0843989769821, Blast_Score=251, Evalue=4e-67,
Organism=Caenorhabditis elegans, GI17510307, Length=378, Percent_Identity=38.0952380952381, Blast_Score=243, Evalue=2e-64,
Organism=Caenorhabditis elegans, GI17510309, Length=378, Percent_Identity=38.0952380952381, Blast_Score=243, Evalue=2e-64,
Organism=Caenorhabditis elegans, GI71995514, Length=378, Percent_Identity=38.0952380952381, Blast_Score=242, Evalue=2e-64,
Organism=Caenorhabditis elegans, GI17510559, Length=460, Percent_Identity=34.5652173913044, Blast_Score=239, Evalue=3e-63,
Organism=Caenorhabditis elegans, GI71995718, Length=374, Percent_Identity=37.7005347593583, Blast_Score=236, Evalue=1e-62,
Organism=Caenorhabditis elegans, GI17507877, Length=358, Percent_Identity=38.268156424581, Blast_Score=234, Evalue=5e-62,
Organism=Caenorhabditis elegans, GI17507879, Length=394, Percent_Identity=35.5329949238579, Blast_Score=231, Evalue=8e-61,
Organism=Caenorhabditis elegans, GI86570094, Length=367, Percent_Identity=37.874659400545, Blast_Score=230, Evalue=9e-61,
Organism=Caenorhabditis elegans, GI17507881, Length=379, Percent_Identity=37.2031662269129, Blast_Score=229, Evalue=3e-60,
Organism=Caenorhabditis elegans, GI17555296, Length=413, Percent_Identity=33.8983050847458, Blast_Score=228, Evalue=7e-60,
Organism=Caenorhabditis elegans, GI17537549, Length=350, Percent_Identity=36, Blast_Score=219, Evalue=3e-57,
Organism=Caenorhabditis elegans, GI17552642, Length=371, Percent_Identity=34.2318059299191, Blast_Score=217, Evalue=1e-56,
Organism=Caenorhabditis elegans, GI71987143, Length=359, Percent_Identity=32.3119777158774, Blast_Score=215, Evalue=3e-56,
Organism=Caenorhabditis elegans, GI115532546, Length=384, Percent_Identity=35.4166666666667, Blast_Score=215, Evalue=4e-56,
Organism=Caenorhabditis elegans, GI115532548, Length=384, Percent_Identity=35.4166666666667, Blast_Score=215, Evalue=4e-56,
Organism=Caenorhabditis elegans, GI17552114, Length=386, Percent_Identity=32.6424870466321, Blast_Score=213, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI71999646, Length=357, Percent_Identity=35.8543417366947, Blast_Score=212, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI71999644, Length=357, Percent_Identity=35.8543417366947, Blast_Score=211, Evalue=6e-55,
Organism=Caenorhabditis elegans, GI71995724, Length=371, Percent_Identity=33.1536388140162, Blast_Score=211, Evalue=8e-55,
Organism=Caenorhabditis elegans, GI17507121, Length=371, Percent_Identity=32.8840970350404, Blast_Score=210, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI17507945, Length=362, Percent_Identity=36.4640883977901, Blast_Score=206, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI71990816, Length=356, Percent_Identity=36.2359550561798, Blast_Score=201, Evalue=9e-52,
Organism=Caenorhabditis elegans, GI17505370, Length=346, Percent_Identity=36.7052023121387, Blast_Score=199, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI17509811, Length=368, Percent_Identity=35.3260869565217, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI193208216, Length=404, Percent_Identity=33.4158415841584, Blast_Score=194, Evalue=5e-50,
Organism=Caenorhabditis elegans, GI71982858, Length=367, Percent_Identity=32.9700272479564, Blast_Score=191, Evalue=5e-49,
Organism=Caenorhabditis elegans, GI17508543, Length=406, Percent_Identity=31.0344827586207, Blast_Score=186, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI17556951, Length=358, Percent_Identity=31.0055865921788, Blast_Score=168, Evalue=6e-42,
Organism=Caenorhabditis elegans, GI17507641, Length=391, Percent_Identity=31.7135549872123, Blast_Score=165, Evalue=4e-41,
Organism=Caenorhabditis elegans, GI32564046, Length=368, Percent_Identity=32.0652173913043, Blast_Score=153, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI193206561, Length=395, Percent_Identity=28.6075949367089, Blast_Score=151, Evalue=6e-37,
Organism=Caenorhabditis elegans, GI25148203, Length=443, Percent_Identity=26.6365688487585, Blast_Score=147, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI17536099, Length=387, Percent_Identity=29.1989664082687, Blast_Score=142, Evalue=4e-34,
Organism=Caenorhabditis elegans, GI17536101, Length=387, Percent_Identity=29.1989664082687, Blast_Score=141, Evalue=5e-34,
Organism=Caenorhabditis elegans, GI17536103, Length=380, Percent_Identity=29.4736842105263, Blast_Score=138, Evalue=7e-33,
Organism=Caenorhabditis elegans, GI17553716, Length=361, Percent_Identity=26.3157894736842, Blast_Score=134, Evalue=7e-32,
Organism=Caenorhabditis elegans, GI25148291, Length=338, Percent_Identity=25.7396449704142, Blast_Score=120, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI71997889, Length=372, Percent_Identity=27.4193548387097, Blast_Score=118, Evalue=5e-27,
Organism=Caenorhabditis elegans, GI71982862, Length=204, Percent_Identity=33.8235294117647, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI25148205, Length=368, Percent_Identity=26.3586956521739, Blast_Score=108, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI71987152, Length=89, Percent_Identity=41.5730337078652, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI71987993, Length=373, Percent_Identity=24.9329758713137, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71987997, Length=373, Percent_Identity=24.9329758713137, Blast_Score=80, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6324778, Length=353, Percent_Identity=38.8101983002833, Blast_Score=260, Evalue=3e-70,
Organism=Saccharomyces cerevisiae, GI6325138, Length=379, Percent_Identity=35.6200527704486, Blast_Score=254, Evalue=2e-68,
Organism=Saccharomyces cerevisiae, GI6324217, Length=355, Percent_Identity=37.4647887323944, Blast_Score=244, Evalue=2e-65,
Organism=Saccharomyces cerevisiae, GI6321856, Length=376, Percent_Identity=38.2978723404255, Blast_Score=241, Evalue=2e-64,
Organism=Saccharomyces cerevisiae, GI6321360, Length=341, Percent_Identity=40.1759530791789, Blast_Score=241, Evalue=2e-64,
Organism=Saccharomyces cerevisiae, GI6323021, Length=353, Percent_Identity=36.8271954674221, Blast_Score=219, Evalue=6e-58,
Organism=Saccharomyces cerevisiae, GI6320449, Length=362, Percent_Identity=35.3591160220994, Blast_Score=211, Evalue=2e-55,
Organism=Saccharomyces cerevisiae, GI6323947, Length=462, Percent_Identity=29.2207792207792, Blast_Score=202, Evalue=6e-53,
Organism=Saccharomyces cerevisiae, GI6320041, Length=371, Percent_Identity=32.6145552560647, Blast_Score=200, Evalue=4e-52,
Organism=Saccharomyces cerevisiae, GI6320224, Length=364, Percent_Identity=32.1428571428571, Blast_Score=198, Evalue=2e-51,
Organism=Saccharomyces cerevisiae, GI6320119, Length=366, Percent_Identity=32.5136612021858, Blast_Score=196, Evalue=5e-51,
Organism=Saccharomyces cerevisiae, GI6322912, Length=370, Percent_Identity=32.972972972973, Blast_Score=188, Evalue=1e-48,
Organism=Saccharomyces cerevisiae, GI6322323, Length=370, Percent_Identity=32.972972972973, Blast_Score=188, Evalue=1e-48,
Organism=Saccharomyces cerevisiae, GI6321111, Length=372, Percent_Identity=32.258064516129, Blast_Score=187, Evalue=4e-48,
Organism=Saccharomyces cerevisiae, GI6321963, Length=381, Percent_Identity=32.5459317585302, Blast_Score=186, Evalue=9e-48,
Organism=Saccharomyces cerevisiae, GI6324620, Length=377, Percent_Identity=32.8912466843501, Blast_Score=183, Evalue=4e-47,
Organism=Saccharomyces cerevisiae, GI6322427, Length=365, Percent_Identity=32.6027397260274, Blast_Score=180, Evalue=4e-46,
Organism=Saccharomyces cerevisiae, GI6319714, Length=358, Percent_Identity=29.0502793296089, Blast_Score=174, Evalue=2e-44,
Organism=Saccharomyces cerevisiae, GI6320400, Length=375, Percent_Identity=32.8, Blast_Score=169, Evalue=8e-43,
Organism=Saccharomyces cerevisiae, GI6319618, Length=411, Percent_Identity=30.4136253041363, Blast_Score=162, Evalue=1e-40,
Organism=Saccharomyces cerevisiae, GI6321267, Length=419, Percent_Identity=30.3102625298329, Blast_Score=156, Evalue=5e-39,
Organism=Saccharomyces cerevisiae, GI6323306, Length=409, Percent_Identity=27.1393643031785, Blast_Score=142, Evalue=9e-35,
Organism=Saccharomyces cerevisiae, GI6320173, Length=192, Percent_Identity=39.0625, Blast_Score=139, Evalue=1e-33,
Organism=Saccharomyces cerevisiae, GI6324366, Length=370, Percent_Identity=26.2162162162162, Blast_Score=125, Evalue=2e-29,
Organism=Saccharomyces cerevisiae, GI6322876, Length=207, Percent_Identity=31.8840579710145, Blast_Score=96, Evalue=8e-21,
Organism=Saccharomyces cerevisiae, GI6321374, Length=399, Percent_Identity=24.0601503759398, Blast_Score=81, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24584399, Length=355, Percent_Identity=39.4366197183099, Blast_Score=269, Evalue=3e-72,
Organism=Drosophila melanogaster, GI21355075, Length=354, Percent_Identity=39.8305084745763, Blast_Score=258, Evalue=5e-69,
Organism=Drosophila melanogaster, GI24642151, Length=351, Percent_Identity=40.7407407407407, Blast_Score=255, Evalue=4e-68,
Organism=Drosophila melanogaster, GI17985987, Length=364, Percent_Identity=39.010989010989, Blast_Score=252, Evalue=4e-67,
Organism=Drosophila melanogaster, GI28574962, Length=385, Percent_Identity=34.5454545454545, Blast_Score=239, Evalue=2e-63,
Organism=Drosophila melanogaster, GI18857967, Length=366, Percent_Identity=36.6120218579235, Blast_Score=236, Evalue=3e-62,
Organism=Drosophila melanogaster, GI21356161, Length=377, Percent_Identity=37.4005305039788, Blast_Score=235, Evalue=5e-62,
Organism=Drosophila melanogaster, GI24662330, Length=379, Percent_Identity=35.0923482849604, Blast_Score=234, Evalue=9e-62,
Organism=Drosophila melanogaster, GI24584994, Length=390, Percent_Identity=34.6153846153846, Blast_Score=232, Evalue=3e-61,
Organism=Drosophila melanogaster, GI24585582, Length=362, Percent_Identity=38.121546961326, Blast_Score=231, Evalue=1e-60,
Organism=Drosophila melanogaster, GI24644483, Length=375, Percent_Identity=33.3333333333333, Blast_Score=226, Evalue=3e-59,
Organism=Drosophila melanogaster, GI24644487, Length=375, Percent_Identity=33.3333333333333, Blast_Score=226, Evalue=3e-59,
Organism=Drosophila melanogaster, GI45551833, Length=375, Percent_Identity=33.3333333333333, Blast_Score=226, Evalue=3e-59,
Organism=Drosophila melanogaster, GI24644485, Length=375, Percent_Identity=33.3333333333333, Blast_Score=226, Evalue=3e-59,
Organism=Drosophila melanogaster, GI281361218, Length=366, Percent_Identity=33.879781420765, Blast_Score=226, Evalue=3e-59,
Organism=Drosophila melanogaster, GI24644481, Length=366, Percent_Identity=33.879781420765, Blast_Score=226, Evalue=3e-59,
Organism=Drosophila melanogaster, GI24644479, Length=366, Percent_Identity=33.879781420765, Blast_Score=225, Evalue=4e-59,
Organism=Drosophila melanogaster, GI28575014, Length=383, Percent_Identity=35.7702349869452, Blast_Score=225, Evalue=4e-59,
Organism=Drosophila melanogaster, GI17977678, Length=372, Percent_Identity=35.752688172043, Blast_Score=223, Evalue=2e-58,
Organism=Drosophila melanogaster, GI24583281, Length=381, Percent_Identity=32.2834645669291, Blast_Score=212, Evalue=4e-55,
Organism=Drosophila melanogaster, GI24583279, Length=381, Percent_Identity=32.2834645669291, Blast_Score=212, Evalue=5e-55,
Organism=Drosophila melanogaster, GI17136814, Length=378, Percent_Identity=35.4497354497354, Blast_Score=205, Evalue=6e-53,
Organism=Drosophila melanogaster, GI24645031, Length=371, Percent_Identity=32.3450134770889, Blast_Score=202, Evalue=3e-52,
Organism=Drosophila melanogaster, GI28571808, Length=347, Percent_Identity=33.7175792507205, Blast_Score=201, Evalue=6e-52,
Organism=Drosophila melanogaster, GI28571809, Length=347, Percent_Identity=33.7175792507205, Blast_Score=201, Evalue=6e-52,
Organism=Drosophila melanogaster, GI24582080, Length=362, Percent_Identity=33.9779005524862, Blast_Score=192, Evalue=3e-49,
Organism=Drosophila melanogaster, GI24582078, Length=362, Percent_Identity=33.9779005524862, Blast_Score=192, Evalue=3e-49,
Organism=Drosophila melanogaster, GI17136248, Length=362, Percent_Identity=33.9779005524862, Blast_Score=192, Evalue=3e-49,
Organism=Drosophila melanogaster, GI24582075, Length=362, Percent_Identity=33.9779005524862, Blast_Score=192, Evalue=3e-49,
Organism=Drosophila melanogaster, GI24666101, Length=369, Percent_Identity=35.230352303523, Blast_Score=192, Evalue=5e-49,
Organism=Drosophila melanogaster, GI281365720, Length=312, Percent_Identity=34.9358974358974, Blast_Score=191, Evalue=8e-49,
Organism=Drosophila melanogaster, GI24581954, Length=355, Percent_Identity=31.830985915493, Blast_Score=187, Evalue=9e-48,
Organism=Drosophila melanogaster, GI24581952, Length=355, Percent_Identity=31.830985915493, Blast_Score=187, Evalue=9e-48,
Organism=Drosophila melanogaster, GI24581956, Length=355, Percent_Identity=31.830985915493, Blast_Score=187, Evalue=9e-48,
Organism=Drosophila melanogaster, GI20130173, Length=500, Percent_Identity=29.4, Blast_Score=182, Evalue=3e-46,
Organism=Drosophila melanogaster, GI24642822, Length=438, Percent_Identity=30.8219178082192, Blast_Score=175, Evalue=6e-44,
Organism=Drosophila melanogaster, GI21355559, Length=370, Percent_Identity=34.5945945945946, Blast_Score=160, Evalue=2e-39,
Organism=Drosophila melanogaster, GI17136666, Length=498, Percent_Identity=29.1164658634538, Blast_Score=155, Evalue=6e-38,
Organism=Drosophila melanogaster, GI17647335, Length=389, Percent_Identity=28.0205655526992, Blast_Score=154, Evalue=9e-38,
Organism=Drosophila melanogaster, GI24643725, Length=393, Percent_Identity=28.7531806615776, Blast_Score=152, Evalue=5e-37,
Organism=Drosophila melanogaster, GI24668515, Length=370, Percent_Identity=30, Blast_Score=147, Evalue=1e-35,
Organism=Drosophila melanogaster, GI19920478, Length=352, Percent_Identity=30.3977272727273, Blast_Score=142, Evalue=5e-34,
Organism=Drosophila melanogaster, GI24640164, Length=377, Percent_Identity=25.1989389920424, Blast_Score=132, Evalue=4e-31,
Organism=Drosophila melanogaster, GI18859659, Length=208, Percent_Identity=36.0576923076923, Blast_Score=125, Evalue=5e-29,
Organism=Drosophila melanogaster, GI28571338, Length=208, Percent_Identity=36.0576923076923, Blast_Score=125, Evalue=5e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 47930; Mature: 47930

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFESYSFAPEILQALAECGYETMTPIQRLAIPPVRRGQDVLASAQTGTGKTAAFALPIL
CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCHHHHHHHHH
QKLLDTPKAREATKARALILAPTRELTEQIANNIKAYAKHLELAVTTVFGGGKTDVQAQK
HHHHCCCCHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHH
LRKGTDIIVATPGRLLEHLLAGNLSLAAVEFLVLDEADRMLDMGFIADIQKLIQACNKER
HHCCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHH
QTLMFSATFSGGVRKLADEIMKKHTVLTADRHNTAATTVSQVVYPVEQRRKRELLSELIG
HEEEEEEHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
RKNWQRVLVFSATREDCEKLTEELNLDGIPSAVIHSEKAQGTRRRALKDFTEGKIRVLVS
CCCCCEEEEEECCHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCEEEEEE
TEVAARGLDIPDLEYVVNFDLPFLPEDYVHRVGRTGRAGKSGVAISFVSREEERTLADIE
EHHHHCCCCCCCCCEEEECCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHH
KLIGQRLKRIVMPGYEVSNRDLLLKQLQKRRSFAKKTRVESDAIAQVAAEKSMAGRRVKV
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEE
KVGSTGNTKKIK
EECCCCCCCCCC
>Mature Secondary Structure
MKFESYSFAPEILQALAECGYETMTPIQRLAIPPVRRGQDVLASAQTGTGKTAAFALPIL
CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCHHHHHHHHH
QKLLDTPKAREATKARALILAPTRELTEQIANNIKAYAKHLELAVTTVFGGGKTDVQAQK
HHHHCCCCHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHH
LRKGTDIIVATPGRLLEHLLAGNLSLAAVEFLVLDEADRMLDMGFIADIQKLIQACNKER
HHCCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHH
QTLMFSATFSGGVRKLADEIMKKHTVLTADRHNTAATTVSQVVYPVEQRRKRELLSELIG
HEEEEEEHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
RKNWQRVLVFSATREDCEKLTEELNLDGIPSAVIHSEKAQGTRRRALKDFTEGKIRVLVS
CCCCCEEEEEECCHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCEEEEEE
TEVAARGLDIPDLEYVVNFDLPFLPEDYVHRVGRTGRAGKSGVAISFVSREEERTLADIE
EHHHHCCCCCCCCCEEEECCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHH
KLIGQRLKRIVMPGYEVSNRDLLLKQLQKRRSFAKKTRVESDAIAQVAAEKSMAGRRVKV
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEE
KVGSTGNTKKIK
EECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]