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The map label for this gene is 119773925

Identifier: 119773925

GI number: 119773925

Start: 970492

End: 971304

Strand: Reverse

Name: 119773925

Synonym: Sama_0788

Alternate gene names: NA

Gene position: 971304-970492 (Counterclockwise)

Preceding gene: 119773927

Following gene: 119773924

Centisome position: 22.56

GC content: 56.21

Gene sequence:

>813_bases
ATGCATCAGGAATTTGCCAAAAATCTTCGCCTCCTTTGCAGCTACTACCGCTCGGTGGCCGAAGTCTGTCGTCGCCTCGA
TATCAACCGGCCTCAGTTCAACCGCTATTTAAGCGGCAAGTATCGCCCCTCGGCACATAGCCTGAGGCGCCTGTGTGACT
TCTTTGGGGTGGAAGAGCATGAAATTCTCATGCCCCACAGCCAGTTTCAGCTGCTTATTCAGGTGCGGCCACGCCCCAGT
GAGCCTGTGAGTGAGGCCCCTGAGCTGGAGCATCTGGCCAGGCTGCAAAGCTTAAGTCAGGGGCTCGATAAGTACCTTGG
CTATTACTTCGAATACCACCTGTCGATGGCGTTCCCGGGCAAAATTTTGCGCAATCTGGTGTGCCTTGAGAAACAGGGTG
GCAAGGTGTACTACCAGCGCACCGAGCGCCTGCAGCAGGCACCCGGTGAAAAGGTGTATCACAGTAAGTATTTCGGTATG
GCGCACTTGTTGGCAGACCGTATCTTTTTAATGGATTATGAGTCGCTTACCGGCAACCAGCTCACGCAGACTATCCTTAT
CCCCACCTTCAAGAGCCGGGTTGGCCGCTTAAGCGGTCTGCGCCTTGGCGCGTCGGCCAGCGGTGAGCGTATCCCCAGCT
GCACCCGGGTGGTGTTCGAGTATCTTGGGCATCAGGTGGATATCCGCAAAACCCTTAAGCTTTGCACCACCCTGGACCCC
GACAGCGGCCAGATAAGCCCACGAATTCTGGAGGCCATTCAAAACGATATGGCGCCGGGCGAGCGGCACTTTCGCGCCCG
CCACAGCTTTTAA

Upstream 100 bases:

>100_bases
TGACGCAGTCTGTCGCACTTTGCTGCTTTTAGGTACACTGAGTGGATAGTTTCCCCCGGTGAGGACACCCATCGTCGCCG
GGAATAATCACAGGTCTGCC

Downstream 100 bases:

>100_bases
GCCCCGGTGATGTCACGGCCCAGTCCGCTTGACCGGGACAGGGTGCAAAGGGCACACTTTTGCTAATTACCTGCAATCAA
AGCCTTGAATGTCAAAGCGA

Product: transcriptional regulator

Products: NA

Alternate protein names: Cro/CI Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator Protein; XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain Protein

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MHQEFAKNLRLLCSYYRSVAEVCRRLDINRPQFNRYLSGKYRPSAHSLRRLCDFFGVEEHEILMPHSQFQLLIQVRPRPS
EPVSEAPELEHLARLQSLSQGLDKYLGYYFEYHLSMAFPGKILRNLVCLEKQGGKVYYQRTERLQQAPGEKVYHSKYFGM
AHLLADRIFLMDYESLTGNQLTQTILIPTFKSRVGRLSGLRLGASASGERIPSCTRVVFEYLGHQVDIRKTLKLCTTLDP
DSGQISPRILEAIQNDMAPGERHFRARHSF

Sequences:

>Translated_270_residues
MHQEFAKNLRLLCSYYRSVAEVCRRLDINRPQFNRYLSGKYRPSAHSLRRLCDFFGVEEHEILMPHSQFQLLIQVRPRPS
EPVSEAPELEHLARLQSLSQGLDKYLGYYFEYHLSMAFPGKILRNLVCLEKQGGKVYYQRTERLQQAPGEKVYHSKYFGM
AHLLADRIFLMDYESLTGNQLTQTILIPTFKSRVGRLSGLRLGASASGERIPSCTRVVFEYLGHQVDIRKTLKLCTTLDP
DSGQISPRILEAIQNDMAPGERHFRARHSF
>Mature_270_residues
MHQEFAKNLRLLCSYYRSVAEVCRRLDINRPQFNRYLSGKYRPSAHSLRRLCDFFGVEEHEILMPHSQFQLLIQVRPRPS
EPVSEAPELEHLARLQSLSQGLDKYLGYYFEYHLSMAFPGKILRNLVCLEKQGGKVYYQRTERLQQAPGEKVYHSKYFGM
AHLLADRIFLMDYESLTGNQLTQTILIPTFKSRVGRLSGLRLGASASGERIPSCTRVVFEYLGHQVDIRKTLKLCTTLDP
DSGQISPRILEAIQNDMAPGERHFRARHSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31267; Mature: 31267

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQEFAKNLRLLCSYYRSVAEVCRRLDINRPQFNRYLSGKYRPSAHSLRRLCDFFGVEEH
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC
EILMPHSQFQLLIQVRPRPSEPVSEAPELEHLARLQSLSQGLDKYLGYYFEYHLSMAFPG
CEECCCHHEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
KILRNLVCLEKQGGKVYYQRTERLQQAPGEKVYHSKYFGMAHLLADRIFLMDYESLTGNQ
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCH
LTQTILIPTFKSRVGRLSGLRLGASASGERIPSCTRVVFEYLGHQVDIRKTLKLCTTLDP
HHHHHHHHHHHHHHHHHHCCEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
DSGQISPRILEAIQNDMAPGERHFRARHSF
CCCCCCHHHHHHHHHCCCCCHHHHHHHCCC
>Mature Secondary Structure
MHQEFAKNLRLLCSYYRSVAEVCRRLDINRPQFNRYLSGKYRPSAHSLRRLCDFFGVEEH
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC
EILMPHSQFQLLIQVRPRPSEPVSEAPELEHLARLQSLSQGLDKYLGYYFEYHLSMAFPG
CEECCCHHEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
KILRNLVCLEKQGGKVYYQRTERLQQAPGEKVYHSKYFGMAHLLADRIFLMDYESLTGNQ
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCH
LTQTILIPTFKSRVGRLSGLRLGASASGERIPSCTRVVFEYLGHQVDIRKTLKLCTTLDP
HHHHHHHHHHHHHHHHHHCCEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
DSGQISPRILEAIQNDMAPGERHFRARHSF
CCCCCCHHHHHHHHHCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA