Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773923

Identifier: 119773923

GI number: 119773923

Start: 968560

End: 969069

Strand: Reverse

Name: 119773923

Synonym: Sama_0786

Alternate gene names: NA

Gene position: 969069-968560 (Counterclockwise)

Preceding gene: 119773924

Following gene: 119773922

Centisome position: 22.5

GC content: 52.75

Gene sequence:

>510_bases
ATGAAACAACTGATGAGTGAAAGACTAACTCTCATTCCAATAGACACCAGCGACAGAGCGCTTGTGGTGGCGCTCAATAC
TGATGCACAGGTAATGACCTTTGTCGCCAAGCCCCAGTCTGTGGAGGCGGCCAACAGGATATTCGATATCATACTGCGAC
AAACTCAGGCACAGCCGCCAAAAATGTACTGCTGGAAAATCACCACGGCGGCACAGGCGACCACGGTGGGGGTGATATCC
CTGACCCGCATGAAAGGGGAATATCTGGGATGGCTGGAAATCGGTGCCCTCAGCCTGCCAGCATTTTACGGCAAGGGATA
CATCCCCGAAGCCATGGAGCTCGTCTGCGCCGATGCTCTGGAGTGTGACGAAATCAAAGGCATATACGCAAAGTTTCAGG
CCGAACATCAGGCATCCTTGCGTATTACCCGCAAAACCCACTTCAGCACACCACAACCCTCGGCTGATTTTCCCGGTTAT
CTTGAGTGCACCAGACGCAAAACTCGGTAA

Upstream 100 bases:

>100_bases
AGGGCATTGTCCGTTTTATTCCCCACCCCCCTCTTAGCCAAGGCCCTGTTAGCCAAAGCCCTCTTAACCAAAACCCCATT
AACCAAAGTAAAGCAATGCC

Downstream 100 bases:

>100_bases
ATCAGGTGTTTCCAATTCGGACACATCCTGTTAACTTAGCCCGCTAAGTACACCGAACTCACATGATGCATGGCTGGAAA
TCTCGTCTGTGTTGGCACCG

Product: acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MKQLMSERLTLIPIDTSDRALVVALNTDAQVMTFVAKPQSVEAANRIFDIILRQTQAQPPKMYCWKITTAAQATTVGVIS
LTRMKGEYLGWLEIGALSLPAFYGKGYIPEAMELVCADALECDEIKGIYAKFQAEHQASLRITRKTHFSTPQPSADFPGY
LECTRRKTR

Sequences:

>Translated_169_residues
MKQLMSERLTLIPIDTSDRALVVALNTDAQVMTFVAKPQSVEAANRIFDIILRQTQAQPPKMYCWKITTAAQATTVGVIS
LTRMKGEYLGWLEIGALSLPAFYGKGYIPEAMELVCADALECDEIKGIYAKFQAEHQASLRITRKTHFSTPQPSADFPGY
LECTRRKTR
>Mature_169_residues
MKQLMSERLTLIPIDTSDRALVVALNTDAQVMTFVAKPQSVEAANRIFDIILRQTQAQPPKMYCWKITTAAQATTVGVIS
LTRMKGEYLGWLEIGALSLPAFYGKGYIPEAMELVCADALECDEIKGIYAKFQAEHQASLRITRKTHFSTPQPSADFPGY
LECTRRKTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18919; Mature: 18919

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLMSERLTLIPIDTSDRALVVALNTDAQVMTFVAKPQSVEAANRIFDIILRQTQAQPP
CCCHHHCCEEEEEECCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCC
KMYCWKITTAAQATTVGVISLTRMKGEYLGWLEIGALSLPAFYGKGYIPEAMELVCADAL
CEEEEEEECCCCHHEEEEEEEEECCCCEECEEEECCEECCHHHCCCCCHHHHHHHHHCCC
ECDEIKGIYAKFQAEHQASLRITRKTHFSTPQPSADFPGYLECTRRKTR
CHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHHHCCCCCC
>Mature Secondary Structure
MKQLMSERLTLIPIDTSDRALVVALNTDAQVMTFVAKPQSVEAANRIFDIILRQTQAQPP
CCCHHHCCEEEEEECCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCC
KMYCWKITTAAQATTVGVISLTRMKGEYLGWLEIGALSLPAFYGKGYIPEAMELVCADAL
CEEEEEEECCCCHHEEEEEEEEECCCCEECEEEECCEECCHHHCCCCCHHHHHHHHHCCC
ECDEIKGIYAKFQAEHQASLRITRKTHFSTPQPSADFPGYLECTRRKTR
CHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA