Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773921

Identifier: 119773921

GI number: 119773921

Start: 967398

End: 967634

Strand: Reverse

Name: 119773921

Synonym: Sama_0784

Alternate gene names: NA

Gene position: 967634-967398 (Counterclockwise)

Preceding gene: 119773922

Following gene: 119773920

Centisome position: 22.47

GC content: 46.41

Gene sequence:

>237_bases
ATGAATCAAGCTGTTGAAATTCTGGCAAAACTTGGCAGCAATACTGCCGTTTCCCTCGATGCCCTGCCTGCTCACATCGC
CGCCATGATAGAAGCTAAAGACATTCAAGCCCTGAAGGCTGAGCTGGATGTGACACCTGATGTATTCTGTGTTTTCTTTC
CTGCTGAGGATGAACCTGAAAAAGAACAGCAAGAAAATGAGGAAGAGGATGAAGCTCCGAAAGCCGTTAATGCGTAA

Upstream 100 bases:

>100_bases
CTGCAAGCGCTGGCAGACACACAAACGCAAGGAACCCCACAGGGCGCCACTGTACTGCCCTTTTCACGCAAAAAAGCGAA
CTCACCATAAGGAAGATAAG

Downstream 100 bases:

>100_bases
TTTTTTAGTTGTCTTCGCATTACTCTCGGTTATTGCCACAGCGGTTAACGCCGCTGATGGCACCTTAGCGCTTTTAAGAG
AGGCAGATTCTCTTCGCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MNQAVEILAKLGSNTAVSLDALPAHIAAMIEAKDIQALKAELDVTPDVFCVFFPAEDEPEKEQQENEEEDEAPKAVNA

Sequences:

>Translated_78_residues
MNQAVEILAKLGSNTAVSLDALPAHIAAMIEAKDIQALKAELDVTPDVFCVFFPAEDEPEKEQQENEEEDEAPKAVNA
>Mature_78_residues
MNQAVEILAKLGSNTAVSLDALPAHIAAMIEAKDIQALKAELDVTPDVFCVFFPAEDEPEKEQQENEEEDEAPKAVNA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8452; Mature: 8452

Theoretical pI: Translated: 3.77; Mature: 3.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQAVEILAKLGSNTAVSLDALPAHIAAMIEAKDIQALKAELDVTPDVFCVFFPAEDEPE
CCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCH
KEQQENEEEDEAPKAVNA
HHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MNQAVEILAKLGSNTAVSLDALPAHIAAMIEAKDIQALKAELDVTPDVFCVFFPAEDEPE
CCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCH
KEQQENEEEDEAPKAVNA
HHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA