| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119773921
Identifier: 119773921
GI number: 119773921
Start: 967398
End: 967634
Strand: Reverse
Name: 119773921
Synonym: Sama_0784
Alternate gene names: NA
Gene position: 967634-967398 (Counterclockwise)
Preceding gene: 119773922
Following gene: 119773920
Centisome position: 22.47
GC content: 46.41
Gene sequence:
>237_bases ATGAATCAAGCTGTTGAAATTCTGGCAAAACTTGGCAGCAATACTGCCGTTTCCCTCGATGCCCTGCCTGCTCACATCGC CGCCATGATAGAAGCTAAAGACATTCAAGCCCTGAAGGCTGAGCTGGATGTGACACCTGATGTATTCTGTGTTTTCTTTC CTGCTGAGGATGAACCTGAAAAAGAACAGCAAGAAAATGAGGAAGAGGATGAAGCTCCGAAAGCCGTTAATGCGTAA
Upstream 100 bases:
>100_bases CTGCAAGCGCTGGCAGACACACAAACGCAAGGAACCCCACAGGGCGCCACTGTACTGCCCTTTTCACGCAAAAAAGCGAA CTCACCATAAGGAAGATAAG
Downstream 100 bases:
>100_bases TTTTTTAGTTGTCTTCGCATTACTCTCGGTTATTGCCACAGCGGTTAACGCCGCTGATGGCACCTTAGCGCTTTTAAGAG AGGCAGATTCTCTTCGCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 78
Protein sequence:
>78_residues MNQAVEILAKLGSNTAVSLDALPAHIAAMIEAKDIQALKAELDVTPDVFCVFFPAEDEPEKEQQENEEEDEAPKAVNA
Sequences:
>Translated_78_residues MNQAVEILAKLGSNTAVSLDALPAHIAAMIEAKDIQALKAELDVTPDVFCVFFPAEDEPEKEQQENEEEDEAPKAVNA >Mature_78_residues MNQAVEILAKLGSNTAVSLDALPAHIAAMIEAKDIQALKAELDVTPDVFCVFFPAEDEPEKEQQENEEEDEAPKAVNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8452; Mature: 8452
Theoretical pI: Translated: 3.77; Mature: 3.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQAVEILAKLGSNTAVSLDALPAHIAAMIEAKDIQALKAELDVTPDVFCVFFPAEDEPE CCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCH KEQQENEEEDEAPKAVNA HHHHCCCCCCCCCCCCCC >Mature Secondary Structure MNQAVEILAKLGSNTAVSLDALPAHIAAMIEAKDIQALKAELDVTPDVFCVFFPAEDEPE CCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCH KEQQENEEEDEAPKAVNA HHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA