| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is katG2
Identifier: 119773883
GI number: 119773883
Start: 915907
End: 918123
Strand: Reverse
Name: katG2
Synonym: Sama_0745
Alternate gene names: 119773883
Gene position: 918123-915907 (Counterclockwise)
Preceding gene: 119773887
Following gene: 119773882
Centisome position: 21.32
GC content: 58.1
Gene sequence:
>2217_bases ATGAAACGCACTCTCCCAACCTTGTCAGCCCTTGCGCTGTCAATGTCGCTGGCCCTGGCCGCTGGCCAAACCCAGGCAGC CGAAACCACCACAAACAGCTACTGGTGGCCAGAACAACTGGATCTGTCTCCACTTCGTCAACATGGCAGCGAGTCCAACC CCTACGGTGCAGATTACGACTATGCAAAAGCGTTTGGCAGCTTGGATCTTGTGGCGGTAAAGGCCGATATCAAAACCGTC CTCACCACCTCTCAGGACTGGTGGCCAGCCGACTACGGTCACTATGGCCCCTTCTTTATCCGCATGGCCTGGCACAGCGC CGGTGTATATCGCATTTTTGATGGCCGTGGCGGTGCCAGTGGTGGCCAACAACGCTTTGAACCTCTGAACAGTTGGCCCG ACAACGTCAACCTCGACAAGGCCCGTCGTCTGCTGTGGCCCATCAAACAAAAGTATGGCAGCAAAATCTCCTGGGCCGAT CTGATGGTGCTGGCCGGTAACGTGTCGCTGGAGTCCATGGGCTTTAAAACCTTCGGCTTCGCCGGCGGCCGCACTGACGA CTGGGAAGCCGAGCGCGTGGATTGGGGCCATGAGAAAAAATGGCTCGACAACAAGCGCCATAACGAAAAAGGCGAACTTG CCAAGCCACTGGGCGCCACCCAGATGGGCCTGATTTACGTCAATCCCGAAGGCCCCAACGGCGTGCCTGACCCACTGGCT GCGGCCCGGGATATCCGTGAAACCTTCGGCCGCATGGCCATGAACGATGAAGAAACCGTTGCCCTCATTGCCGGTGGCCA CACCTTCGGTAAGGCACACGGTGCGCACGATCCGGCCAAGTGCGTTGGCGCAGACCCGGCCGCTGCCGGTGTCGAAGCCC AGGGACTTGGCTGGAAGAACAAGTGTGGCAAGGGCCACTCTGAAGACACAGTGACCAGCGGCCTGGAAGGTGCCTGGTCT GTCAGCCCGACCCAGTGGACCATGCAGTACCTGGATAACCTCTACGGTTTCGAGTGGGTGCAGTCCAAGAGTCCGGCTGG CCACATCCAGTGGATCCCCGCCAACGGTGCAGGTGACAACCTGGTACCCGATGCCCATGTGGCCGGAAAGCGCCATGCGC CCATCATGTTCACCACGGATATCGCGCTCAAGGAAGATCCCAGCTACCGGGAGATCACCAGCCGCTTCCGTAAAGACCCC AAGGCCTTCGAACTGGCCTTTGCCAAAGCCTGGTTTAAGCTGACCCACAGAGACATGGGACCAAAAACCCGCTATCTGGG CAGCGATGTACCTGCCGAAGCCCTGATTTGGCAAGACCCCATTCCGGCACTTGACCACGCTGTTATCGACACCAATGACA TTGCTGCCCTGAAATCTGCCATTCTGGCTTCCGGCATTGCAGTCCCCGAGCTGGTACGTACCGCCTGGGCCTCTGCGGCC AGTTTCCGAGGCACAGATATGCGTGGTGGTGCCAACGGTGCCCGTCTGCGCCTCGAACCGCAGCGCAGCTGGGAGGTCAA CAACCCCGAAGAACTGGCCAAGGTGCTGCCAAAGCTTGAGAAAATCCAGAAGGATTTCAACAAGTCACTCAAAGGTGGCA AAAAAGTCTCTCTGGCTGATGTGATAGTGCTCGCCGGTGGTACCGCCATCGAACAAGCCGCCAGGTCTGCCGGTTACTCG GTGACAGTGCCCTTCACTCCGGGCCGTATGGATGCCACCACCGCCCAGACAGATGTCAGCTCTTTTGCGGTACTTGAGCC CAAGGCCGATGCCTTCCGTAACTTCTTCAGTGAAGAAAGCTATCTGCCACCTGCCGAAGCCCTGGTTGAAAAAGCCACTC AGCTGACCCTGTCAGTACCTGAAATGACCGCACTGGTGGGCGGCTTACGGGTGCTTGATGCCAACAGCAACAAGGCAAAG CACGGTGTCTTTACCGACAAGCCTGGCAACCTGAGCAATGATTTCTTCGTCAATCTGCTGGACATGTCCACCCGTTGGGA AAAGTCCCCCAGGGAGGCAGGCCTCTACCAGGGCTTTGACCGTCAAAGCGGCAAGCTCAGGTGGACAGCCACCCCGGTGG ATCTGATTTTTGGGTCTCACGCCGAGCTGCGCGCCGTGGCCGAGGTCTATGGTGCCAACGACGGTAAAGACCGCTTTGTG GAAGACTTTATTGCCGCCTGGACCAAGGTAATGAACCTGGACAGATTTGATATCTAA
Upstream 100 bases:
>100_bases ATAGTGCTCCCCGGCCCATCACCTGACATGGCCCATGCCGTGTCATATAACAACCGGCACAGTCAATACTGACACTGTGC CCCAAGGACAGGATACGCAG
Downstream 100 bases:
>100_bases GGCCCGGATACTCACTGGCTGAATTTCATCAAGGCACCGCCCCCATTTACATAACCGGGGGATCTGCGGTGCCTTTTTTT ATATCGTATCGATAAATTCT
Product: catalase
Products: NA
Alternate protein names: CP 2; Peroxidase/catalase 2
Number of amino acids: Translated: 738; Mature: 738
Protein sequence:
>738_residues MKRTLPTLSALALSMSLALAAGQTQAAETTTNSYWWPEQLDLSPLRQHGSESNPYGADYDYAKAFGSLDLVAVKADIKTV LTTSQDWWPADYGHYGPFFIRMAWHSAGVYRIFDGRGGASGGQQRFEPLNSWPDNVNLDKARRLLWPIKQKYGSKISWAD LMVLAGNVSLESMGFKTFGFAGGRTDDWEAERVDWGHEKKWLDNKRHNEKGELAKPLGATQMGLIYVNPEGPNGVPDPLA AARDIRETFGRMAMNDEETVALIAGGHTFGKAHGAHDPAKCVGADPAAAGVEAQGLGWKNKCGKGHSEDTVTSGLEGAWS VSPTQWTMQYLDNLYGFEWVQSKSPAGHIQWIPANGAGDNLVPDAHVAGKRHAPIMFTTDIALKEDPSYREITSRFRKDP KAFELAFAKAWFKLTHRDMGPKTRYLGSDVPAEALIWQDPIPALDHAVIDTNDIAALKSAILASGIAVPELVRTAWASAA SFRGTDMRGGANGARLRLEPQRSWEVNNPEELAKVLPKLEKIQKDFNKSLKGGKKVSLADVIVLAGGTAIEQAARSAGYS VTVPFTPGRMDATTAQTDVSSFAVLEPKADAFRNFFSEESYLPPAEALVEKATQLTLSVPEMTALVGGLRVLDANSNKAK HGVFTDKPGNLSNDFFVNLLDMSTRWEKSPREAGLYQGFDRQSGKLRWTATPVDLIFGSHAELRAVAEVYGANDGKDRFV EDFIAAWTKVMNLDRFDI
Sequences:
>Translated_738_residues MKRTLPTLSALALSMSLALAAGQTQAAETTTNSYWWPEQLDLSPLRQHGSESNPYGADYDYAKAFGSLDLVAVKADIKTV LTTSQDWWPADYGHYGPFFIRMAWHSAGVYRIFDGRGGASGGQQRFEPLNSWPDNVNLDKARRLLWPIKQKYGSKISWAD LMVLAGNVSLESMGFKTFGFAGGRTDDWEAERVDWGHEKKWLDNKRHNEKGELAKPLGATQMGLIYVNPEGPNGVPDPLA AARDIRETFGRMAMNDEETVALIAGGHTFGKAHGAHDPAKCVGADPAAAGVEAQGLGWKNKCGKGHSEDTVTSGLEGAWS VSPTQWTMQYLDNLYGFEWVQSKSPAGHIQWIPANGAGDNLVPDAHVAGKRHAPIMFTTDIALKEDPSYREITSRFRKDP KAFELAFAKAWFKLTHRDMGPKTRYLGSDVPAEALIWQDPIPALDHAVIDTNDIAALKSAILASGIAVPELVRTAWASAA SFRGTDMRGGANGARLRLEPQRSWEVNNPEELAKVLPKLEKIQKDFNKSLKGGKKVSLADVIVLAGGTAIEQAARSAGYS VTVPFTPGRMDATTAQTDVSSFAVLEPKADAFRNFFSEESYLPPAEALVEKATQLTLSVPEMTALVGGLRVLDANSNKAK HGVFTDKPGNLSNDFFVNLLDMSTRWEKSPREAGLYQGFDRQSGKLRWTATPVDLIFGSHAELRAVAEVYGANDGKDRFV EDFIAAWTKVMNLDRFDI >Mature_738_residues MKRTLPTLSALALSMSLALAAGQTQAAETTTNSYWWPEQLDLSPLRQHGSESNPYGADYDYAKAFGSLDLVAVKADIKTV LTTSQDWWPADYGHYGPFFIRMAWHSAGVYRIFDGRGGASGGQQRFEPLNSWPDNVNLDKARRLLWPIKQKYGSKISWAD LMVLAGNVSLESMGFKTFGFAGGRTDDWEAERVDWGHEKKWLDNKRHNEKGELAKPLGATQMGLIYVNPEGPNGVPDPLA AARDIRETFGRMAMNDEETVALIAGGHTFGKAHGAHDPAKCVGADPAAAGVEAQGLGWKNKCGKGHSEDTVTSGLEGAWS VSPTQWTMQYLDNLYGFEWVQSKSPAGHIQWIPANGAGDNLVPDAHVAGKRHAPIMFTTDIALKEDPSYREITSRFRKDP KAFELAFAKAWFKLTHRDMGPKTRYLGSDVPAEALIWQDPIPALDHAVIDTNDIAALKSAILASGIAVPELVRTAWASAA SFRGTDMRGGANGARLRLEPQRSWEVNNPEELAKVLPKLEKIQKDFNKSLKGGKKVSLADVIVLAGGTAIEQAARSAGYS VTVPFTPGRMDATTAQTDVSSFAVLEPKADAFRNFFSEESYLPPAEALVEKATQLTLSVPEMTALVGGLRVLDANSNKAK HGVFTDKPGNLSNDFFVNLLDMSTRWEKSPREAGLYQGFDRQSGKLRWTATPVDLIFGSHAELRAVAEVYGANDGKDRFV EDFIAAWTKVMNLDRFDI
Specific function: Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
COG id: COG0376
COG function: function code P; Catalase (peroxidase I)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peroxidase family. Peroxidase/catalase subfamily
Homologues:
Organism=Escherichia coli, GI1790378, Length=718, Percent_Identity=57.3816155988858, Blast_Score=786, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KATG2_SHEAM (A1S3J7)
Other databases:
- EMBL: CP000507 - RefSeq: YP_926623.1 - ProteinModelPortal: A1S3J7 - SMR: A1S3J7 - STRING: A1S3J7 - PeroxiBase: 3598 - GeneID: 4602998 - GenomeReviews: CP000507_GR - KEGG: saz:Sama_0745 - NMPDR: fig|326297.7.peg.697 - eggNOG: COG0376 - HOGENOM: HBG285610 - OMA: KNKCGKG - PhylomeDB: A1S3J7 - ProtClustDB: PRK15061 - HAMAP: MF_01961 - InterPro: IPR000763 - InterPro: IPR010255 - InterPro: IPR002016 - InterPro: IPR019794 - InterPro: IPR019793 - PRINTS: PR00460 - PRINTS: PR00458 - TIGRFAMs: TIGR00198
Pfam domain/function: PF00141 peroxidase; SSF48113 Peroxidase_super
EC number: =1.11.1.6; =1.11.1.7
Molecular weight: Translated: 80793; Mature: 80793
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS00435 PEROXIDASE_1; PS00436 PEROXIDASE_2; PS50873 PEROXIDASE_4
Important sites: ACT_SITE 105-105
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTLPTLSALALSMSLALAAGQTQAAETTTNSYWWPEQLDLSPLRQHGSESNPYGADYD CCCCCHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCH YAKAFGSLDLVAVKADIKTVLTTSQDWWPADYGHYGPFFIRMAWHSAGVYRIFDGRGGAS HHHHCCCCEEEEEECHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCC GGQQRFEPLNSWPDNVNLDKARRLLWPIKQKYGSKISWADLMVLAGNVSLESMGFKTFGF CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEEEEECCCCHHHCCCEEEEC AGGRTDDWEAERVDWGHEKKWLDNKRHNEKGELAKPLGATQMGLIYVNPEGPNGVPDPLA CCCCCCCCCHHHCCCCCCHHHHCCCCCCCCCCHHCCCCCCEEEEEEECCCCCCCCCCHHH AARDIRETFGRMAMNDEETVALIAGGHTFGKAHGAHDPAKCVGADPAAAGVEAQGLGWKN HHHHHHHHHHHHCCCCCCEEEEEECCCHHCCCCCCCCCHHHCCCCCHHCCCCCCCCCCHH KCGKGHSEDTVTSGLEGAWSVSPTQWTMQYLDNLYGFEWVQSKSPAGHIQWIPANGAGDN HCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCCEEEEECCCCCCC LVPDAHVAGKRHAPIMFTTDIALKEDPSYREITSRFRKDPKAFELAFAKAWFKLTHRDMG CCCCCHHCCCCCCCEEEEECEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC PKTRYLGSDVPAEALIWQDPIPALDHAVIDTNDIAALKSAILASGIAVPELVRTAWASAA CCHHHCCCCCCCHHEEECCCCCHHHHEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH SFRGTDMRGGANGARLRLEPQRSWEVNNPEELAKVLPKLEKIQKDFNKSLKGGKKVSLAD HCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHEE VIVLAGGTAIEQAARSAGYSVTVPFTPGRMDATTAQTDVSSFAVLEPKADAFRNFFSEES EEEECCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHCCCCEEEECCCHHHHHHHHCCCC YLPPAEALVEKATQLTLSVPEMTALVGGLRVLDANSNKAKHGVFTDKPGNLSNDFFVNLL CCCHHHHHHHHHHHEEEECHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEE DMSTRWEKSPREAGLYQGFDRQSGKLRWTATPVDLIFGSHAELRAVAEVYGANDGKDRFV CCCHHCCCCCHHHHHHCCCCCCCCEEEEECCCHHHHCCCCHHHHHHHHHHCCCCCHHHHH EDFIAAWTKVMNLDRFDI HHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKRTLPTLSALALSMSLALAAGQTQAAETTTNSYWWPEQLDLSPLRQHGSESNPYGADYD CCCCCHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCH YAKAFGSLDLVAVKADIKTVLTTSQDWWPADYGHYGPFFIRMAWHSAGVYRIFDGRGGAS HHHHCCCCEEEEEECHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCC GGQQRFEPLNSWPDNVNLDKARRLLWPIKQKYGSKISWADLMVLAGNVSLESMGFKTFGF CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEEEEECCCCHHHCCCEEEEC AGGRTDDWEAERVDWGHEKKWLDNKRHNEKGELAKPLGATQMGLIYVNPEGPNGVPDPLA CCCCCCCCCHHHCCCCCCHHHHCCCCCCCCCCHHCCCCCCEEEEEEECCCCCCCCCCHHH AARDIRETFGRMAMNDEETVALIAGGHTFGKAHGAHDPAKCVGADPAAAGVEAQGLGWKN HHHHHHHHHHHHCCCCCCEEEEEECCCHHCCCCCCCCCHHHCCCCCHHCCCCCCCCCCHH KCGKGHSEDTVTSGLEGAWSVSPTQWTMQYLDNLYGFEWVQSKSPAGHIQWIPANGAGDN HCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCCEEEEECCCCCCC LVPDAHVAGKRHAPIMFTTDIALKEDPSYREITSRFRKDPKAFELAFAKAWFKLTHRDMG CCCCCHHCCCCCCCEEEEECEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC PKTRYLGSDVPAEALIWQDPIPALDHAVIDTNDIAALKSAILASGIAVPELVRTAWASAA CCHHHCCCCCCCHHEEECCCCCHHHHEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH SFRGTDMRGGANGARLRLEPQRSWEVNNPEELAKVLPKLEKIQKDFNKSLKGGKKVSLAD HCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHEE VIVLAGGTAIEQAARSAGYSVTVPFTPGRMDATTAQTDVSSFAVLEPKADAFRNFFSEES EEEECCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHCCCCEEEECCCHHHHHHHHCCCC YLPPAEALVEKATQLTLSVPEMTALVGGLRVLDANSNKAKHGVFTDKPGNLSNDFFVNLL CCCHHHHHHHHHHHEEEECHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEE DMSTRWEKSPREAGLYQGFDRQSGKLRWTATPVDLIFGSHAELRAVAEVYGANDGKDRFV CCCHHCCCCCHHHHHHCCCCCCCCEEEEECCCHHHHCCCCHHHHHHHHHHCCCCCHHHHH EDFIAAWTKVMNLDRFDI HHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA