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The map label for this gene is rsmC

Identifier: 119773707

GI number: 119773707

Start: 708577

End: 709539

Strand: Reverse

Name: rsmC

Synonym: Sama_0569

Alternate gene names: 119773707

Gene position: 709539-708577 (Counterclockwise)

Preceding gene: 119773711

Following gene: 119773706

Centisome position: 16.48

GC content: 53.27

Gene sequence:

>963_bases
ATGTTAATTAACATCGAAGCGGACGAGCTGGGACATCACTTGACCCGCCACTGCAGCGAAGTCGCAGCGCTGGCGCTCGA
CTTTAATCATTTTCAGGCACAACCTTCGGGTAAAAGTGGGTTTCGCTGCGAATTTGGTCATCAGTGGAGTCGGGATGAAA
AATTCGATGTGGTGGTGGTGTATTTCCCCAAAGCCAAAGCGTTGGCACCTTATTTATTTGCACTCGCAGCCTGGCACCTG
CGCCCGGATGGCACGCTGCTGATTACCGGTGAAAACAAAGGCGGCATCAGGTCAGTGGATAAGCTGCTGGGCAACGCCTT
TTCCCCGGCCTGTAAAATCGATAATGCCAGACACTGCCTGCTGTACAGTGCCACTCTGGTAGCAGAGGCAACCAAACCCA
ATGCCGAAGATTGGGTGAGCAGGTACCGGCTGTCACTGCCCAGCGGCGATATCCAAATCTGTAATATGGTGGGCGTGTTT
TCAGACAAGCAACTGGACCAGGGCACCGCCTTACTGTTGGATAACCTGCCCAAACTTGAGGGCCGCGTGCTGGATTTCGG
CTGCGGCGCCGGTGTGATTGCCATCGCTCTGATGCAGCAAAACCCCGGGCTTCAGCTGGAATGTGTGGATATCAATGCCA
TGGCGCTCTTGTCCTGTGAGCTGTCACTCAAGGCCAATGGCATGGAGGCGAAAGTCTATGCTTCCGATGGGCTGGCGCAG
ACTGACGGCCTGTTTAATGCCATTGTTTCCAACCCGCCATTTCACGACGGTTTAAGCAGCACCACAGATATCGCAACCCG
TTTTGTGGCCGACAGTTACAAGCAACTGCACAAAGGTGGCAATTGGCAAATCGTTGCCAACCGCCACCTACCCTATTCGG
ATACCATTGCCAAGGTGTTTGGCGAGGTCAATACGGTGGCAGAAAACAACAAGTACAAGGTCTACGCCAACAAAAAACGT
TGA

Upstream 100 bases:

>100_bases
TATAATCGGCTCAAATTTCACGACGTAGAACACCACATTGCTTTCCAACCCCTCCGAGCTCGTGACAAGAAACATAGAGC
AGCTTGAAAATCAACGCGTT

Downstream 100 bases:

>100_bases
TAATACGGTGCCAAATGCCCTGAATCAGGGCGTTTGGCGCCCCAGTCCTCATTCGCCAGTCTCTAAAAAAATCACTAAAC
TGAAAATCAGTGCACAAATT

Product: rRNA (guanine-N(2)-)-methyltransferase

Products: NA

Alternate protein names: 16S rRNA m2G1207 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rsmC

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MLINIEADELGHHLTRHCSEVAALALDFNHFQAQPSGKSGFRCEFGHQWSRDEKFDVVVVYFPKAKALAPYLFALAAWHL
RPDGTLLITGENKGGIRSVDKLLGNAFSPACKIDNARHCLLYSATLVAEATKPNAEDWVSRYRLSLPSGDIQICNMVGVF
SDKQLDQGTALLLDNLPKLEGRVLDFGCGAGVIAIALMQQNPGLQLECVDINAMALLSCELSLKANGMEAKVYASDGLAQ
TDGLFNAIVSNPPFHDGLSSTTDIATRFVADSYKQLHKGGNWQIVANRHLPYSDTIAKVFGEVNTVAENNKYKVYANKKR

Sequences:

>Translated_320_residues
MLINIEADELGHHLTRHCSEVAALALDFNHFQAQPSGKSGFRCEFGHQWSRDEKFDVVVVYFPKAKALAPYLFALAAWHL
RPDGTLLITGENKGGIRSVDKLLGNAFSPACKIDNARHCLLYSATLVAEATKPNAEDWVSRYRLSLPSGDIQICNMVGVF
SDKQLDQGTALLLDNLPKLEGRVLDFGCGAGVIAIALMQQNPGLQLECVDINAMALLSCELSLKANGMEAKVYASDGLAQ
TDGLFNAIVSNPPFHDGLSSTTDIATRFVADSYKQLHKGGNWQIVANRHLPYSDTIAKVFGEVNTVAENNKYKVYANKKR
>Mature_320_residues
MLINIEADELGHHLTRHCSEVAALALDFNHFQAQPSGKSGFRCEFGHQWSRDEKFDVVVVYFPKAKALAPYLFALAAWHL
RPDGTLLITGENKGGIRSVDKLLGNAFSPACKIDNARHCLLYSATLVAEATKPNAEDWVSRYRLSLPSGDIQICNMVGVF
SDKQLDQGTALLLDNLPKLEGRVLDFGCGAGVIAIALMQQNPGLQLECVDINAMALLSCELSLKANGMEAKVYASDGLAQ
TDGLFNAIVSNPPFHDGLSSTTDIATRFVADSYKQLHKGGNWQIVANRHLPYSDTIAKVFGEVNTVAENNKYKVYANKKR

Specific function: Specifically methylates the guanosine in position 1207 of 16S rRNA in the 30S particle

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmC family

Homologues:

Organism=Escherichia coli, GI1790830, Length=262, Percent_Identity=36.2595419847328, Blast_Score=177, Evalue=5e-46,
Organism=Escherichia coli, GI87082206, Length=189, Percent_Identity=34.9206349206349, Blast_Score=108, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSMC_SHEAM (A1S321)

Other databases:

- EMBL:   CP000507
- RefSeq:   YP_926447.1
- ProteinModelPortal:   A1S321
- STRING:   A1S321
- GeneID:   4602822
- GenomeReviews:   CP000507_GR
- KEGG:   saz:Sama_0569
- NMPDR:   fig|326297.7.peg.535
- eggNOG:   COG2813
- HOGENOM:   HBG296757
- ProtClustDB:   CLSK905955
- GO:   GO:0005737
- HAMAP:   MF_01862
- InterPro:   IPR002052
- InterPro:   IPR013675
- InterPro:   IPR007848

Pfam domain/function: PF05175 MTS; PF08468 MTS_N

EC number: =2.1.1.172

Molecular weight: Translated: 35012; Mature: 35012

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLINIEADELGHHLTRHCSEVAALALDFNHFQAQPSGKSGFRCEFGHQWSRDEKFDVVVV
CEEEEEHHHHHHHHHHHHHHHHHHHEEHHHHCCCCCCCCCCEEECCCCCCCCCCCCEEEE
YFPKAKALAPYLFALAAWHLRPDGTLLITGENKGGIRSVDKLLGNAFSPACKIDNARHCL
ECCCCHHHHHHHHHHHHHEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCEEE
LYSATLVAEATKPNAEDWVSRYRLSLPSGDIQICNMVGVFSDKQLDQGTALLLDNLPKLE
EEEEEEEEECCCCCHHHHHHHHEECCCCCCEEEEEEEECCCCCCCCCCCEEEECCCCCCC
GRVLDFGCGAGVIAIALMQQNPGLQLECVDINAMALLSCELSLKANGMEAKVYASDGLAQ
CEEEEECCCCHHEEEEEEECCCCCEEEEEECCEEEEEEEEEEEECCCEEEEEEECCCCCH
TDGLFNAIVSNPPFHDGLSSTTDIATRFVADSYKQLHKGGNWQIVANRHLPYSDTIAKVF
HCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH
GEVNTVAENNKYKVYANKKR
HHHHHEECCCCEEEEECCCC
>Mature Secondary Structure
MLINIEADELGHHLTRHCSEVAALALDFNHFQAQPSGKSGFRCEFGHQWSRDEKFDVVVV
CEEEEEHHHHHHHHHHHHHHHHHHHEEHHHHCCCCCCCCCCEEECCCCCCCCCCCCEEEE
YFPKAKALAPYLFALAAWHLRPDGTLLITGENKGGIRSVDKLLGNAFSPACKIDNARHCL
ECCCCHHHHHHHHHHHHHEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCEEE
LYSATLVAEATKPNAEDWVSRYRLSLPSGDIQICNMVGVFSDKQLDQGTALLLDNLPKLE
EEEEEEEEECCCCCHHHHHHHHEECCCCCCEEEEEEEECCCCCCCCCCCEEEECCCCCCC
GRVLDFGCGAGVIAIALMQQNPGLQLECVDINAMALLSCELSLKANGMEAKVYASDGLAQ
CEEEEECCCCHHEEEEEEECCCCCEEEEEECCEEEEEEEEEEEECCCEEEEEEECCCCCH
TDGLFNAIVSNPPFHDGLSSTTDIATRFVADSYKQLHKGGNWQIVANRHLPYSDTIAKVF
HCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH
GEVNTVAENNKYKVYANKKR
HHHHHEECCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA