Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773705

Identifier: 119773705

GI number: 119773705

Start: 706314

End: 706658

Strand: Reverse

Name: 119773705

Synonym: Sama_0567

Alternate gene names: NA

Gene position: 706658-706314 (Counterclockwise)

Preceding gene: 119773706

Following gene: 119773704

Centisome position: 16.41

GC content: 53.62

Gene sequence:

>345_bases
ATGGGTGCAGGCCAAACTCCCCATCCTCAGTTAATCTGGCCAGCCCTGCTCAAACAGCAGGGCTGTAACGAACTCTTACC
GCTGCGAACCAACGACGACTGGCAGAGGTTCTGTGCTGATTCCAAACATCTGCTGCAATATGGCGACAAACTGGTCGATT
CCAACTTTCACTGTTTTGTACTTGAAGAAGATGCCCACTGGCATCCAGCCGCCCCCCTGCCACCCGAGGGTTTGAATGAC
CTCATTCGCGCCCACTGCGCCACCCTCGGTCACTGTTGTACCAGCAAGATGCATCTGCATTCAGTGATGGATGCCATCGA
TTTTCTCAATGCATTGGAGGGCTGA

Upstream 100 bases:

>100_bases
AGGTCAGGCCTTTAACCGCACCCAAAGGGAACACGGCACCTGTATAGTCACCAATCAGGGGCAGGAAGTGTACTTCGATT
ACAGTGCCAAGCCCTGATCA

Downstream 100 bases:

>100_bases
AAAAGCCCGTATTTCCCGCTATGATGCTCGCCAATTTATTGTGTATGGCCATGCTGATGGTCAGATGCGTGTTTACCGCA
GGGAAAAATGAGGTGCATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MGAGQTPHPQLIWPALLKQQGCNELLPLRTNDDWQRFCADSKHLLQYGDKLVDSNFHCFVLEEDAHWHPAAPLPPEGLND
LIRAHCATLGHCCTSKMHLHSVMDAIDFLNALEG

Sequences:

>Translated_114_residues
MGAGQTPHPQLIWPALLKQQGCNELLPLRTNDDWQRFCADSKHLLQYGDKLVDSNFHCFVLEEDAHWHPAAPLPPEGLND
LIRAHCATLGHCCTSKMHLHSVMDAIDFLNALEG
>Mature_113_residues
GAGQTPHPQLIWPALLKQQGCNELLPLRTNDDWQRFCADSKHLLQYGDKLVDSNFHCFVLEEDAHWHPAAPLPPEGLNDL
IRAHCATLGHCCTSKMHLHSVMDAIDFLNALEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12778; Mature: 12646

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAGQTPHPQLIWPALLKQQGCNELLPLRTNDDWQRFCADSKHLLQYGDKLVDSNFHCFV
CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCEEEE
LEEDAHWHPAAPLPPEGLNDLIRAHCATLGHCCTSKMHLHSVMDAIDFLNALEG
ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GAGQTPHPQLIWPALLKQQGCNELLPLRTNDDWQRFCADSKHLLQYGDKLVDSNFHCFV
CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCEEEE
LEEDAHWHPAAPLPPEGLNDLIRAHCATLGHCCTSKMHLHSVMDAIDFLNALEG
ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA