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The map label for this gene is 119773693

Identifier: 119773693

GI number: 119773693

Start: 682208

End: 684316

Strand: Reverse

Name: 119773693

Synonym: Sama_0554

Alternate gene names: NA

Gene position: 684316-682208 (Counterclockwise)

Preceding gene: 119773694

Following gene: 119773689

Centisome position: 15.89

GC content: 40.21

Gene sequence:

>2109_bases
ATGATCAAATTGAGACTGGCAATGGCAGAATCGCCCCATACTCGATTTAAATTAAATAACTTCATTATCGATTGTCATAA
CATGACGATCGATAATGGAGATAAATCGGTAAAGCTTCCCATAAAGGTCTTTGATTATCTTAAACTTTTCTTGTTTAATG
AAAATCATATCGTTGAACACGAAGATGCAATAAACCGAATTTGGAACGGCAATGAAGGAGTTGGCAAGCGTGGTTATATT
AATGCCATGTGGCAAATTCGAAAGGCATTTACCGACCTTGGCGCCGACTGTGACGAACTATTTAAAACACTCCCCAAAGT
CGGCTACGTTCTCACAGTAACACCCGAACCTATCCCACGGCTTGCCGTCCCCGCCCCAACACGGAGATGGCCTTTGCTGG
TGTTGATCTCACTGATGTTGTTGGCAGGCCTAGCGTCTTACTCCCTTATTCAAAACCGAAAGTTTGGTCCGGCACAGGAA
CAAATTGAAGACACCATGAAGTTTCCTGCTCTGACGAGCGTGACAAACTTTCAAGGTGTGGAAGAGCATCCCGCGATTTC
GAATGACGGCAATATGCTTGCATTTCAATGGCTTCAAGAGAACAGGCATAGTGGGCTATACATTAAAGATTTAAGTGACA
GCAAGAATCCACTGCGACTCGTTTCATCCGGTAAATACCAGGAAGCCCTGCCGATCTGGTCTCCTGATGATACCGCCCTT
GCCTATGTTCGCATCGACGACAAAAATCAATGCCAGATAAGAGTCAAACAGCTGCGCACTCAGCAGGAAAAGTTAATAGA
TACCGACTGTGGTTATGTTGAATTCAAAAAAATGTTGGATTGGTCGCCCGATGGGAGAATGTTGCTCTATCCAAAGCGAA
TAAATGGCATTTTTGCATTTTTTAAATATGACTTTGTCACTGAGAAAACCACGCAAGTCAGTTTTCCAGAAAAAAACACC
AGCGATTTTATGGGTATTTGGTTAGAAAATAATCAAGACATTGTCGTAGTTCGAGAACAAGCACAACAATACAAGCTGAT
TCTGTTGCAGCCCTCAGGGCAAGAAAAAAGCTTGCTTGATTATAAAGAATCTATTACGGGTTTAACCCGAGGCAAAGACA
ATAACCAAGTTTTTGTTAATTTCTCGGAAAATGGAAAAATTGCCACTTACCTTTTGAGTTTTAATAATATAGATGCACCT
GAATTAAAATTGATAAATCAGCTAAGTGGTGCTTCTGGCCTGAGCTTTAATCACAAAACCAATGAGCTTCTTGTCGCAAA
ACATCAGTCAAGTGAATATATAGTACAGCGCAGATTTGATAGTGCTCAAATCGTTCGAAGAGTATTCTCTTCTAATCGCG
ATTTATACGGTCAATTCATCTCAGATCCTGAAAATATTGTCTTTGTCTCAAATCGTTCGGCAAATTGGGACCTATGGAGA
CAGAATGAGCAGGAGGCTCGCAATCTCACCAATGGTATAGGGACAGTAAACTTCGCATCTGTGTCCCCTGATGGAAAACA
TTTCGCCACCGCACTCGTCAAAGAGGGGGATGACAAACAGCGTTTATATATTGGTAATGTACAGGATGGACATTTAATTA
GAGTTGATACGGGTAGTTTGACACCTACTTTTCCAACGTGGTCACTCGATGGCTCCCTGGTTTATTTCTCTGCGATTAAG
AATAATCATAATGGCATCTACCAGTTAGATATTAAAACATCAACAACCACACAATTAACATTCACTGATGAGATATATGC
CATCCCAGCGGGGAATGACCAACTATTAGTTTCTCGTACAAATGAGGATGGTATTTGGCGATTTGATATAAATTCAAACC
AATTCAGCCAAATTGTAACTGATTTATCGATTAACGATTTTGGCAGCTTTTTTATTCAGGATGATGAGCTTTACTACCTT
ACCAGAACAAAACAGAGTGACATAATTAAAAAATATCAAGAAAATGACAATGATGCTATCTTAGCGATCTACCCCGCAGA
CTCAGTCAGGAAGTACTTTGGAATTTCAAAAGGTGACAGTGATAGTTTTCTGATCACTTTAAACAGCATTTATGATGCGG
ACATATTTTCGTTTCCAGTAACATTTTAA

Upstream 100 bases:

>100_bases
CTACGATTCAAATGATGTCACGATAGAGTGAACCAGCCTCCCATTTTGCGAGCGCTTATCAACTACTGTCTAAGGTGTTA
CTATTGCCGAACGTTTTTGA

Downstream 100 bases:

>100_bases
ATATCTATCAGCGGACTCTTCTCAAGAACCATAACGTCTCCGGCGCACCAAAGGTGGGTTTACCGTTCCGGCTGACACAC
TCAACGACCTAGAGAAGCTG

Product: putative transcriptional regulator, CadC

Products: NA

Alternate protein names: Transcriptional Regulator CadC; Transcriptional Regulatory Protein-Like; LB Domain Protein; Transcriptional Regulator

Number of amino acids: Translated: 702; Mature: 702

Protein sequence:

>702_residues
MIKLRLAMAESPHTRFKLNNFIIDCHNMTIDNGDKSVKLPIKVFDYLKLFLFNENHIVEHEDAINRIWNGNEGVGKRGYI
NAMWQIRKAFTDLGADCDELFKTLPKVGYVLTVTPEPIPRLAVPAPTRRWPLLVLISLMLLAGLASYSLIQNRKFGPAQE
QIEDTMKFPALTSVTNFQGVEEHPAISNDGNMLAFQWLQENRHSGLYIKDLSDSKNPLRLVSSGKYQEALPIWSPDDTAL
AYVRIDDKNQCQIRVKQLRTQQEKLIDTDCGYVEFKKMLDWSPDGRMLLYPKRINGIFAFFKYDFVTEKTTQVSFPEKNT
SDFMGIWLENNQDIVVVREQAQQYKLILLQPSGQEKSLLDYKESITGLTRGKDNNQVFVNFSENGKIATYLLSFNNIDAP
ELKLINQLSGASGLSFNHKTNELLVAKHQSSEYIVQRRFDSAQIVRRVFSSNRDLYGQFISDPENIVFVSNRSANWDLWR
QNEQEARNLTNGIGTVNFASVSPDGKHFATALVKEGDDKQRLYIGNVQDGHLIRVDTGSLTPTFPTWSLDGSLVYFSAIK
NNHNGIYQLDIKTSTTTQLTFTDEIYAIPAGNDQLLVSRTNEDGIWRFDINSNQFSQIVTDLSINDFGSFFIQDDELYYL
TRTKQSDIIKKYQENDNDAILAIYPADSVRKYFGISKGDSDSFLITLNSIYDADIFSFPVTF

Sequences:

>Translated_702_residues
MIKLRLAMAESPHTRFKLNNFIIDCHNMTIDNGDKSVKLPIKVFDYLKLFLFNENHIVEHEDAINRIWNGNEGVGKRGYI
NAMWQIRKAFTDLGADCDELFKTLPKVGYVLTVTPEPIPRLAVPAPTRRWPLLVLISLMLLAGLASYSLIQNRKFGPAQE
QIEDTMKFPALTSVTNFQGVEEHPAISNDGNMLAFQWLQENRHSGLYIKDLSDSKNPLRLVSSGKYQEALPIWSPDDTAL
AYVRIDDKNQCQIRVKQLRTQQEKLIDTDCGYVEFKKMLDWSPDGRMLLYPKRINGIFAFFKYDFVTEKTTQVSFPEKNT
SDFMGIWLENNQDIVVVREQAQQYKLILLQPSGQEKSLLDYKESITGLTRGKDNNQVFVNFSENGKIATYLLSFNNIDAP
ELKLINQLSGASGLSFNHKTNELLVAKHQSSEYIVQRRFDSAQIVRRVFSSNRDLYGQFISDPENIVFVSNRSANWDLWR
QNEQEARNLTNGIGTVNFASVSPDGKHFATALVKEGDDKQRLYIGNVQDGHLIRVDTGSLTPTFPTWSLDGSLVYFSAIK
NNHNGIYQLDIKTSTTTQLTFTDEIYAIPAGNDQLLVSRTNEDGIWRFDINSNQFSQIVTDLSINDFGSFFIQDDELYYL
TRTKQSDIIKKYQENDNDAILAIYPADSVRKYFGISKGDSDSFLITLNSIYDADIFSFPVTF
>Mature_702_residues
MIKLRLAMAESPHTRFKLNNFIIDCHNMTIDNGDKSVKLPIKVFDYLKLFLFNENHIVEHEDAINRIWNGNEGVGKRGYI
NAMWQIRKAFTDLGADCDELFKTLPKVGYVLTVTPEPIPRLAVPAPTRRWPLLVLISLMLLAGLASYSLIQNRKFGPAQE
QIEDTMKFPALTSVTNFQGVEEHPAISNDGNMLAFQWLQENRHSGLYIKDLSDSKNPLRLVSSGKYQEALPIWSPDDTAL
AYVRIDDKNQCQIRVKQLRTQQEKLIDTDCGYVEFKKMLDWSPDGRMLLYPKRINGIFAFFKYDFVTEKTTQVSFPEKNT
SDFMGIWLENNQDIVVVREQAQQYKLILLQPSGQEKSLLDYKESITGLTRGKDNNQVFVNFSENGKIATYLLSFNNIDAP
ELKLINQLSGASGLSFNHKTNELLVAKHQSSEYIVQRRFDSAQIVRRVFSSNRDLYGQFISDPENIVFVSNRSANWDLWR
QNEQEARNLTNGIGTVNFASVSPDGKHFATALVKEGDDKQRLYIGNVQDGHLIRVDTGSLTPTFPTWSLDGSLVYFSAIK
NNHNGIYQLDIKTSTTTQLTFTDEIYAIPAGNDQLLVSRTNEDGIWRFDINSNQFSQIVTDLSINDFGSFFIQDDELYYL
TRTKQSDIIKKYQENDNDAILAIYPADSVRKYFGISKGDSDSFLITLNSIYDADIFSFPVTF

Specific function: Unknown

COG id: COG0823

COG function: function code U; Periplasmic component of the Tol biopolymer transport system

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80136; Mature: 80136

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLRLAMAESPHTRFKLNNFIIDCHNMTIDNGDKSVKLPIKVFDYLKLFLFNENHIVEH
CEEEEEEECCCCCCEEEEEEEEEEEECEEEECCCCEEEEHHHHHHEEEEEEECCCCEECC
EDAINRIWNGNEGVGKRGYINAMWQIRKAFTDLGADCDELFKTLPKVGYVLTVTPEPIPR
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEECCCCCCC
LAVPAPTRRWPLLVLISLMLLAGLASYSLIQNRKFGPAQEQIEDTMKFPALTSVTNFQGV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
EEHPAISNDGNMLAFQWLQENRHSGLYIKDLSDSKNPLRLVSSGKYQEALPIWSPDDTAL
CCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCEE
AYVRIDDKNQCQIRVKQLRTQQEKLIDTDCGYVEFKKMLDWSPDGRMLLYPKRINGIFAF
EEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEECCCEEEEE
FKYDFVTEKTTQVSFPEKNTSDFMGIWLENNQDIVVVREQAQQYKLILLQPSGQEKSLLD
EEEEEEECCCEEEECCCCCCCCEEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCHHHH
YKESITGLTRGKDNNQVFVNFSENGKIATYLLSFNNIDAPELKLINQLSGASGLSFNHKT
HHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCEECCCC
NELLVAKHQSSEYIVQRRFDSAQIVRRVFSSNRDLYGQFISDPENIVFVSNRSANWDLWR
CEEEEEECCCCHHHHHHCCCHHHHHHHHHHCCCCEEHHHCCCCCCEEEEECCCCCCCCCC
QNEQEARNLTNGIGTVNFASVSPDGKHFATALVKEGDDKQRLYIGNVQDGHLIRVDTGSL
CCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEECCCCCCEEEEEECCCC
TPTFPTWSLDGSLVYFSAIKNNHNGIYQLDIKTSTTTQLTFTDEIYAIPAGNDQLLVSRT
CCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCEEEEEEECEEEEEECCCCEEEEEEC
NEDGIWRFDINSNQFSQIVTDLSINDFGSFFIQDDELYYLTRTKQSDIIKKYQENDNDAI
CCCCEEEEECCCCHHHHHHHCCCCCCCCCEEEECCCEEEEEECCHHHHHHHHHCCCCCEE
LAIYPADSVRKYFGISKGDSDSFLITLNSIYDADIFSFPVTF
EEEECCHHHHHHHCCCCCCCCEEEEEEECCCCCCCEECCCCC
>Mature Secondary Structure
MIKLRLAMAESPHTRFKLNNFIIDCHNMTIDNGDKSVKLPIKVFDYLKLFLFNENHIVEH
CEEEEEEECCCCCCEEEEEEEEEEEECEEEECCCCEEEEHHHHHHEEEEEEECCCCEECC
EDAINRIWNGNEGVGKRGYINAMWQIRKAFTDLGADCDELFKTLPKVGYVLTVTPEPIPR
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEECCCCCCC
LAVPAPTRRWPLLVLISLMLLAGLASYSLIQNRKFGPAQEQIEDTMKFPALTSVTNFQGV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
EEHPAISNDGNMLAFQWLQENRHSGLYIKDLSDSKNPLRLVSSGKYQEALPIWSPDDTAL
CCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCEE
AYVRIDDKNQCQIRVKQLRTQQEKLIDTDCGYVEFKKMLDWSPDGRMLLYPKRINGIFAF
EEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEECCCEEEEE
FKYDFVTEKTTQVSFPEKNTSDFMGIWLENNQDIVVVREQAQQYKLILLQPSGQEKSLLD
EEEEEEECCCEEEECCCCCCCCEEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCHHHH
YKESITGLTRGKDNNQVFVNFSENGKIATYLLSFNNIDAPELKLINQLSGASGLSFNHKT
HHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCEECCCC
NELLVAKHQSSEYIVQRRFDSAQIVRRVFSSNRDLYGQFISDPENIVFVSNRSANWDLWR
CEEEEEECCCCHHHHHHCCCHHHHHHHHHHCCCCEEHHHCCCCCCEEEEECCCCCCCCCC
QNEQEARNLTNGIGTVNFASVSPDGKHFATALVKEGDDKQRLYIGNVQDGHLIRVDTGSL
CCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEECCCCCCEEEEEECCCC
TPTFPTWSLDGSLVYFSAIKNNHNGIYQLDIKTSTTTQLTFTDEIYAIPAGNDQLLVSRT
CCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCEEEEEEECEEEEEECCCCEEEEEEC
NEDGIWRFDINSNQFSQIVTDLSINDFGSFFIQDDELYYLTRTKQSDIIKKYQENDNDAI
CCCCEEEEECCCCHHHHHHHCCCCCCCCCEEEECCCEEEEEECCHHHHHHHHHCCCCCEE
LAIYPADSVRKYFGISKGDSDSFLITLNSIYDADIFSFPVTF
EEEECCHHHHHHHCCCCCCCCEEEEEEECCCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA