Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773586

Identifier: 119773586

GI number: 119773586

Start: 552004

End: 552729

Strand: Direct

Name: 119773586

Synonym: Sama_0446

Alternate gene names: NA

Gene position: 552004-552729 (Clockwise)

Preceding gene: 119773579

Following gene: 119773587

Centisome position: 12.82

GC content: 56.61

Gene sequence:

>726_bases
ATGACAAGACTTTTCATCCTTGCCTTGCTGTTGATGGTTCAGGCCCTGACGCCTGCACAGGCGCGTTTATCCCATGTCAG
TATCAATAAAAGCCAATTCACTTTGGGCGAATACCCGCGTCTGCGAGTCAATATTGTGTCTGAGCGCAGTGACCTGTCGC
GGCTGGAGTTTGTGGTGCGCCAGGGTACCCGGGAAGAAAAGCTCATGGTTGAGCCCCTGAACAACTTTATGTTGTTGCTG
TTTGGCGTCGACAATGTGACAGACGCCAATGCCGAACTGGTGGTGCGCGAATACGTGGTCAATCAGTGGCAGGAATATAA
GGTTATCCCGCTGTTTGGTGGCACGGAGCGAGTCGCGAAAGCACCGAGCGCGTCCCCGAGAAAGGCCGCCGAGCTGTTGG
CTCCCGAGTCCGTACCTGTGGCGAAACCCACTCCCGTGCAAATGTCGCTTGCCAGCGCGGCCAACGACAGCGGTGGCTGC
GCCGTTGAGTACCAGCCAGGGGAGACCCTCTGGCGCATTGCCAGTCGTTATGCGCCCCGCTGGAATACCAACGTATACAG
CACCATGATGGCATTGTTTGATGCCAATCCCCGCGCCTTTACCAAGGGCAAAATCAGTGGCCTCAAGCAAGATGCTAAGC
TGGAGTGCCCATCACCGGCGCTGCTGGGGCGTTATCCGGATACCCGAGAGGCGAGACGCATTTTTGAAGCCAAAAGCCTG
GAGTGA

Upstream 100 bases:

>100_bases
TTGCCTCTAGTGTAACGGCAGCGTGGGAACTCAGCCACAGCTAATGCAGCCCAGTAACTATGCAAGAAAAACAATGCAAG
AAAACGATGCAGGAAAAACA

Downstream 100 bases:

>100_bases
ATCGCTGGCTTTTTAAGCGACGATCTGCTTGTCAGTATGGGTGAGATCCTGTACCATTCTGCGCCCTAACATACTTGTTA
TTAACTGCATGTGGTGTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MTRLFILALLLMVQALTPAQARLSHVSINKSQFTLGEYPRLRVNIVSERSDLSRLEFVVRQGTREEKLMVEPLNNFMLLL
FGVDNVTDANAELVVREYVVNQWQEYKVIPLFGGTERVAKAPSASPRKAAELLAPESVPVAKPTPVQMSLASAANDSGGC
AVEYQPGETLWRIASRYAPRWNTNVYSTMMALFDANPRAFTKGKISGLKQDAKLECPSPALLGRYPDTREARRIFEAKSL
E

Sequences:

>Translated_241_residues
MTRLFILALLLMVQALTPAQARLSHVSINKSQFTLGEYPRLRVNIVSERSDLSRLEFVVRQGTREEKLMVEPLNNFMLLL
FGVDNVTDANAELVVREYVVNQWQEYKVIPLFGGTERVAKAPSASPRKAAELLAPESVPVAKPTPVQMSLASAANDSGGC
AVEYQPGETLWRIASRYAPRWNTNVYSTMMALFDANPRAFTKGKISGLKQDAKLECPSPALLGRYPDTREARRIFEAKSL
E
>Mature_240_residues
TRLFILALLLMVQALTPAQARLSHVSINKSQFTLGEYPRLRVNIVSERSDLSRLEFVVRQGTREEKLMVEPLNNFMLLLF
GVDNVTDANAELVVREYVVNQWQEYKVIPLFGGTERVAKAPSASPRKAAELLAPESVPVAKPTPVQMSLASAANDSGGCA
VEYQPGETLWRIASRYAPRWNTNVYSTMMALFDANPRAFTKGKISGLKQDAKLECPSPALLGRYPDTREARRIFEAKSLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26887; Mature: 26756

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLFILALLLMVQALTPAQARLSHVSINKSQFTLGEYPRLRVNIVSERSDLSRLEFVVR
CHHHHHHHHHHHHHHCCCHHHHHHHEECCCCEEECCCCCEEEEEEECCHHHHHHHHHHHH
QGTREEKLMVEPLNNFMLLLFGVDNVTDANAELVVREYVVNQWQEYKVIPLFGGTERVAK
CCCCCHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCHHCEEEEEEECCHHHHHC
APSASPRKAAELLAPESVPVAKPTPVQMSLASAANDSGGCAVEYQPGETLWRIASRYAPR
CCCCCHHHHHHHHCCCCCCCCCCCCCEEEHHHCCCCCCCEEEEECCCHHHHHHHHHCCCC
WNTNVYSTMMALFDANPRAFTKGKISGLKQDAKLECPSPALLGRYPDTREARRIFEAKSL
CCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCC
E
C
>Mature Secondary Structure 
TRLFILALLLMVQALTPAQARLSHVSINKSQFTLGEYPRLRVNIVSERSDLSRLEFVVR
HHHHHHHHHHHHHHCCCHHHHHHHEECCCCEEECCCCCEEEEEEECCHHHHHHHHHHHH
QGTREEKLMVEPLNNFMLLLFGVDNVTDANAELVVREYVVNQWQEYKVIPLFGGTERVAK
CCCCCHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCHHCEEEEEEECCHHHHHC
APSASPRKAAELLAPESVPVAKPTPVQMSLASAANDSGGCAVEYQPGETLWRIASRYAPR
CCCCCHHHHHHHHCCCCCCCCCCCCCEEEHHHCCCCCCCEEEEECCCHHHHHHHHHCCCC
WNTNVYSTMMALFDANPRAFTKGKISGLKQDAKLECPSPALLGRYPDTREARRIFEAKSL
CCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA