Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773567

Identifier: 119773567

GI number: 119773567

Start: 524243

End: 524767

Strand: Direct

Name: 119773567

Synonym: Sama_0427

Alternate gene names: NA

Gene position: 524243-524767 (Clockwise)

Preceding gene: 119773563

Following gene: 119773570

Centisome position: 12.17

GC content: 60.76

Gene sequence:

>525_bases
ATGACAAAGCCTTGGTGTTCTGTCGCTGTGGTGGCACTGCTGGCCCTGTCCGCCGCACCCTTGCCGGTATTGGCTGATCT
AAGCACCTCGGTGTGGATTGGCAACCACAATGGATTGGGACTGAGTTTTTCCAGCGGCGGTTATGGCCACTGGCGCTACC
CGGGGGCGTACTGGAACGGCGGCTGGGGTTGGCGCGACCCCATTTATCGGGATCCCTTTTGGCGTTATAACGACAGCTGG
TACTGGCAACACAGGGCCTGGGAGCAGGAACGTCAGGCGCAGCGGGATGCACGCGCCGAGCGAGAGCGCCAGCGGCTGAT
GACGCAGCCAAGGGTGGTGCCGCCAGCCATGATCACCCGTTCCCGGGAACAGGTTGAGGGCTTGGCCTCTTTGCCGCAAA
ACGCCCGGGTGCTGATGGTGGATGGAAAACCTCAGTATGAATGGCAGGGGCAGAGATACAGTTTCGACTGGCATACCCAG
CGTTATATGCCGGTGCCGCCAGTGCCCTCAAGCGAGTCCAGATAA

Upstream 100 bases:

>100_bases
CATATGGAAATGCCTCTGTTTGCAAAACCCTTTTGTGGCGCGCACTATACCACTAAAGCCCCGTTGGCGGAATCAAAAGC
GCCCCGGGCAGGAGGGGAGT

Downstream 100 bases:

>100_bases
TAGAAAACGCCGTCCACTGGACGGCGTTTTCAGTTTAAACCGGTTTGCTTATCAGAAGCTTACGGTTTCAATGTCGGAGC
AACCACCATCGGAGTTGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MTKPWCSVAVVALLALSAAPLPVLADLSTSVWIGNHNGLGLSFSSGGYGHWRYPGAYWNGGWGWRDPIYRDPFWRYNDSW
YWQHRAWEQERQAQRDARAERERQRLMTQPRVVPPAMITRSREQVEGLASLPQNARVLMVDGKPQYEWQGQRYSFDWHTQ
RYMPVPPVPSSESR

Sequences:

>Translated_174_residues
MTKPWCSVAVVALLALSAAPLPVLADLSTSVWIGNHNGLGLSFSSGGYGHWRYPGAYWNGGWGWRDPIYRDPFWRYNDSW
YWQHRAWEQERQAQRDARAERERQRLMTQPRVVPPAMITRSREQVEGLASLPQNARVLMVDGKPQYEWQGQRYSFDWHTQ
RYMPVPPVPSSESR
>Mature_173_residues
TKPWCSVAVVALLALSAAPLPVLADLSTSVWIGNHNGLGLSFSSGGYGHWRYPGAYWNGGWGWRDPIYRDPFWRYNDSWY
WQHRAWEQERQAQRDARAERERQRLMTQPRVVPPAMITRSREQVEGLASLPQNARVLMVDGKPQYEWQGQRYSFDWHTQR
YMPVPPVPSSESR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20290; Mature: 20159

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKPWCSVAVVALLALSAAPLPVLADLSTSVWIGNHNGLGLSFSSGGYGHWRYPGAYWNG
CCCCHHHHHHHHHHHHCCCCCCEEECCCCEEEEECCCCCEEEECCCCCCCEECCCCCCCC
GWGWRDPIYRDPFWRYNDSWYWQHRAWEQERQAQRDARAERERQRLMTQPRVVPPAMITR
CCCCCCCCCCCCCEEECCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHC
SREQVEGLASLPQNARVLMVDGKPQYEWQGQRYSFDWHTQRYMPVPPVPSSESR
CHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TKPWCSVAVVALLALSAAPLPVLADLSTSVWIGNHNGLGLSFSSGGYGHWRYPGAYWNG
CCCHHHHHHHHHHHHCCCCCCEEECCCCEEEEECCCCCEEEECCCCCCCEECCCCCCCC
GWGWRDPIYRDPFWRYNDSWYWQHRAWEQERQAQRDARAERERQRLMTQPRVVPPAMITR
CCCCCCCCCCCCCEEECCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHC
SREQVEGLASLPQNARVLMVDGKPQYEWQGQRYSFDWHTQRYMPVPPVPSSESR
CHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA