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The map label for this gene is ylbK [H]

Identifier: 119773520

GI number: 119773520

Start: 464790

End: 466994

Strand: Direct

Name: ylbK [H]

Synonym: Sama_0379

Alternate gene names: 119773520

Gene position: 464790-466994 (Clockwise)

Preceding gene: 119773519

Following gene: 119773521

Centisome position: 10.79

GC content: 54.69

Gene sequence:

>2205_bases
ATGAAGAAACTTCTGTCACTGCTGCTGTTATTTCCTCTCTCTCTTGCCCAGGCGGCAGACCGTCCCAAGGTGGGCCTGGT
CCTCAGTGGTGGTGGAGCCAAAGGCGCTGCGCATGTAGGTGTGCTCAAGGTGCTGGAAGAGCAAAACATTCCGGTTGATT
ACGTCGCCGGTACCAGCATCGGGGCTTATGTGGCCGGTATGTATGCCCTCGGTTACAGCGCCAGCGAAATTGAAGCCATC
ATGATGAATGTGGATTGGAACAGGGGTTATTCGGATACCATCCCCCGGGAGGCACTTAGCTATCGCGACAAGCAGCTCAG
GGACAAGTACAACATACCGCTGAATATCGGCTACGCAGATGCAGAAGTGAAAGCCCCCAGCGGCGTACTCCGGGGCCAGA
CCATGTCGCTATTACTGCGTGAGTCAACCGATGTGGTCCGTGAATTTACCAGTTTCGATGAACTCGCTATTCCCTACCGT
GCCGTTGCCACCGATTTGGCCACCAGTCAGCCGGTTATCTTATCCGGCGGCAGTGTCATCAAGGCGATGCAGGCATCGGC
CACCGTGCCCGGTGCATTGCAGCCCATGTTGATTGATGGACGCTTGCTGGTGGATGGCGGTATCGCCAATAACATGCCGG
TGGATGTGGTCAAAGCCATGGGCGCCGATGTCGTCATAGCAGTGGACATAGGCTCGCCACTGGTGGGCAATGAGGAGCTC
GATAGCACAATCGCGGTGCTGAACCAGTTGTCTACCATGTTGACTGCAGCCAGCACCGAGGCGCAGAAGAAATTGCTGAC
CGAGAAAGATGTGCTTATCCGTCCGGCCATCGATGCCCTCAGTACCACAGATTTCAGCATCATGAGTACCGCATTGTCTT
TGGGGGAAGAGGCGGCAAGGGGGCAGCTCGCGCAGCTTCAGGGCCTGGGCATTGAGGCGCAGCAATACGCAGATTATCAG
CAGAGCAAGCGGGGCAGGTCCAAGGTGTGGCTGGATGACATGCAGCGTCCTGTAGTCGACATTGTCTATGACAATCACTC
CAGAGTCAGCGAAAGCCTGCTGGAAGATACGCTGGGCATCAAGCCCGGACAGGTTGTGAAACGCGAAGATCTGGAAGCGG
GAGTGAATCAGCTATACGCCCTGAACCGATTCGAGCGGGTGGATGCCGAATTTACTGACACGCCAGAAGGACGGGTACTG
ACAGTCTCCACCAAGGCCAAGTCATGGGGCCCCAACTATTTTGATTTGGGCTTTAACTGGGAAGACGACTTTACCGCCGA
CTCCGCTGTGACCCTGGATACTGCCTACACCATGACCAATCTCAATGAGAATGGGGGAGAGTGGCGCAACGAGCTGAAAC
TTGGTTACGAAAAGTTGCTGGGTACCGAGTTTTACCAGCCACTGGACCGCGATCAGGAATTCTATGGCCGTGCCCGCTAT
CAGTATGAAATTACCGCATGGGAACTCTTCGACGCCAATAACAAGGTGTTTGAATTCGATAAAGACTCTCACCGAATCGA
CATGGGGCTGGGGCTTAATTTTGCCCAGCTGGGCCAGCTTGAGCTGGGTGTCACAGGTGAAAAGGGCAAAATTTCCAACG
AGGCACTGCTAACAGAGGACTTAACGTTTTCATCCTATGGCGGTTATTTCCAGATTGGTTACGACAGCCTCAACAGCATC
AGCTTCCCCACGTCCGGCAACAGGGTCACGCTGCGCGTCACTGTGCGCAAGGAAGACTATGACATAGACGACTATGAGCT
GGAATCCAGTACTCAGGTTCAGGCCGATTGGAAAGGGGCTTTGGGCGTTGGTAACCATGCCTTTGTGGGCAAGGTGTCAC
TGGAATCCTCGGACAACGACGGCGAGTCCTATGTGCACCTTGCCGAACTCGGCGGGTTTTTGAACCTGTCGGGCTATCGA
AAAGACTCCCTGGTGGGAGCCCACAAGGTCTTTGGTGCCTTTGTGTATCAATACGACCTGGGGCGTGATGCCCTCGGCAT
GACGGACTACCCCCTCTATCTGGGTGCCAGTCTTGAGGCCGGTAACGTCTGGTGGGAGATGGACGAAGTCTCTCTGCAGG
ACTTGATATATGCCGGCAGCCTTTACATAGGTACGGATACCGATCTTGGCCCCGCAGCCCTGGGTATTGGTCTTACCGAT
GATGGCCAGCGCTCCTTCTACCTGTTTGTTGGAAAGAATTTTTAG

Upstream 100 bases:

>100_bases
GTTCGTTACTGTTCAGTAATTGCTCATGTTTTTAACTTAATTACGTCATGTCTGTTAGAATGGCGGCCACTGAAACCCTT
TCACTTAGCTCCCGGGTCAC

Downstream 100 bases:

>100_bases
CAACTCACAGAAATTTACAAAAACCCGCTTCGAAAGGCCTGACATCTCCTGTTAGGCTGTGCGGGACCTTTCCGCCCGCA
GCTTGGGCACATAACAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 734; Mature: 734

Protein sequence:

>734_residues
MKKLLSLLLLFPLSLAQAADRPKVGLVLSGGGAKGAAHVGVLKVLEEQNIPVDYVAGTSIGAYVAGMYALGYSASEIEAI
MMNVDWNRGYSDTIPREALSYRDKQLRDKYNIPLNIGYADAEVKAPSGVLRGQTMSLLLRESTDVVREFTSFDELAIPYR
AVATDLATSQPVILSGGSVIKAMQASATVPGALQPMLIDGRLLVDGGIANNMPVDVVKAMGADVVIAVDIGSPLVGNEEL
DSTIAVLNQLSTMLTAASTEAQKKLLTEKDVLIRPAIDALSTTDFSIMSTALSLGEEAARGQLAQLQGLGIEAQQYADYQ
QSKRGRSKVWLDDMQRPVVDIVYDNHSRVSESLLEDTLGIKPGQVVKREDLEAGVNQLYALNRFERVDAEFTDTPEGRVL
TVSTKAKSWGPNYFDLGFNWEDDFTADSAVTLDTAYTMTNLNENGGEWRNELKLGYEKLLGTEFYQPLDRDQEFYGRARY
QYEITAWELFDANNKVFEFDKDSHRIDMGLGLNFAQLGQLELGVTGEKGKISNEALLTEDLTFSSYGGYFQIGYDSLNSI
SFPTSGNRVTLRVTVRKEDYDIDDYELESSTQVQADWKGALGVGNHAFVGKVSLESSDNDGESYVHLAELGGFLNLSGYR
KDSLVGAHKVFGAFVYQYDLGRDALGMTDYPLYLGASLEAGNVWWEMDEVSLQDLIYAGSLYIGTDTDLGPAALGIGLTD
DGQRSFYLFVGKNF

Sequences:

>Translated_734_residues
MKKLLSLLLLFPLSLAQAADRPKVGLVLSGGGAKGAAHVGVLKVLEEQNIPVDYVAGTSIGAYVAGMYALGYSASEIEAI
MMNVDWNRGYSDTIPREALSYRDKQLRDKYNIPLNIGYADAEVKAPSGVLRGQTMSLLLRESTDVVREFTSFDELAIPYR
AVATDLATSQPVILSGGSVIKAMQASATVPGALQPMLIDGRLLVDGGIANNMPVDVVKAMGADVVIAVDIGSPLVGNEEL
DSTIAVLNQLSTMLTAASTEAQKKLLTEKDVLIRPAIDALSTTDFSIMSTALSLGEEAARGQLAQLQGLGIEAQQYADYQ
QSKRGRSKVWLDDMQRPVVDIVYDNHSRVSESLLEDTLGIKPGQVVKREDLEAGVNQLYALNRFERVDAEFTDTPEGRVL
TVSTKAKSWGPNYFDLGFNWEDDFTADSAVTLDTAYTMTNLNENGGEWRNELKLGYEKLLGTEFYQPLDRDQEFYGRARY
QYEITAWELFDANNKVFEFDKDSHRIDMGLGLNFAQLGQLELGVTGEKGKISNEALLTEDLTFSSYGGYFQIGYDSLNSI
SFPTSGNRVTLRVTVRKEDYDIDDYELESSTQVQADWKGALGVGNHAFVGKVSLESSDNDGESYVHLAELGGFLNLSGYR
KDSLVGAHKVFGAFVYQYDLGRDALGMTDYPLYLGASLEAGNVWWEMDEVSLQDLIYAGSLYIGTDTDLGPAALGIGLTD
DGQRSFYLFVGKNF
>Mature_734_residues
MKKLLSLLLLFPLSLAQAADRPKVGLVLSGGGAKGAAHVGVLKVLEEQNIPVDYVAGTSIGAYVAGMYALGYSASEIEAI
MMNVDWNRGYSDTIPREALSYRDKQLRDKYNIPLNIGYADAEVKAPSGVLRGQTMSLLLRESTDVVREFTSFDELAIPYR
AVATDLATSQPVILSGGSVIKAMQASATVPGALQPMLIDGRLLVDGGIANNMPVDVVKAMGADVVIAVDIGSPLVGNEEL
DSTIAVLNQLSTMLTAASTEAQKKLLTEKDVLIRPAIDALSTTDFSIMSTALSLGEEAARGQLAQLQGLGIEAQQYADYQ
QSKRGRSKVWLDDMQRPVVDIVYDNHSRVSESLLEDTLGIKPGQVVKREDLEAGVNQLYALNRFERVDAEFTDTPEGRVL
TVSTKAKSWGPNYFDLGFNWEDDFTADSAVTLDTAYTMTNLNENGGEWRNELKLGYEKLLGTEFYQPLDRDQEFYGRARY
QYEITAWELFDANNKVFEFDKDSHRIDMGLGLNFAQLGQLELGVTGEKGKISNEALLTEDLTFSSYGGYFQIGYDSLNSI
SFPTSGNRVTLRVTVRKEDYDIDDYELESSTQVQADWKGALGVGNHAFVGKVSLESSDNDGESYVHLAELGGFLNLSGYR
KDSLVGAHKVFGAFVYQYDLGRDALGMTDYPLYLGASLEAGNVWWEMDEVSLQDLIYAGSLYIGTDTDLGPAALGIGLTD
DGQRSFYLFVGKNF

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI148727335, Length=307, Percent_Identity=31.2703583061889, Blast_Score=118, Evalue=2e-26,
Organism=Homo sapiens, GI148727290, Length=307, Percent_Identity=31.2703583061889, Blast_Score=118, Evalue=3e-26,
Organism=Homo sapiens, GI260656041, Length=212, Percent_Identity=33.9622641509434, Blast_Score=113, Evalue=8e-25,
Organism=Homo sapiens, GI116256487, Length=212, Percent_Identity=33.9622641509434, Blast_Score=113, Evalue=8e-25,
Organism=Homo sapiens, GI260656039, Length=212, Percent_Identity=33.9622641509434, Blast_Score=113, Evalue=8e-25,
Organism=Homo sapiens, GI260656043, Length=212, Percent_Identity=33.9622641509434, Blast_Score=112, Evalue=9e-25,
Organism=Homo sapiens, GI260656037, Length=212, Percent_Identity=33.9622641509434, Blast_Score=112, Evalue=1e-24,
Organism=Escherichia coli, GI226510936, Length=327, Percent_Identity=26.9113149847095, Blast_Score=99, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI71997299, Length=320, Percent_Identity=27.5, Blast_Score=88, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71997289, Length=320, Percent_Identity=27.5, Blast_Score=88, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI193204778, Length=210, Percent_Identity=30.952380952381, Blast_Score=77, Evalue=5e-14,
Organism=Saccharomyces cerevisiae, GI6323581, Length=344, Percent_Identity=26.453488372093, Blast_Score=82, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 80285; Mature: 80285

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLSLLLLFPLSLAQAADRPKVGLVLSGGGAKGAAHVGVLKVLEEQNIPVDYVAGTSI
CHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCH
GAYVAGMYALGYSASEIEAIMMNVDWNRGYSDTIPREALSYRDKQLRDKYNIPLNIGYAD
HHHHHHHHHHCCCHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCC
AEVKAPSGVLRGQTMSLLLRESTDVVREFTSFDELAIPYRAVATDLATSQPVILSGGSVI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHCCCCCEEEECCHHH
KAMQASATVPGALQPMLIDGRLLVDGGIANNMPVDVVKAMGADVVIAVDIGSPLVGNEEL
HHHHHCCCCCCCCCCEEECCEEEEECCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCHHH
DSTIAVLNQLSTMLTAASTEAQKKLLTEKDVLIRPAIDALSTTDFSIMSTALSLGEEAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCHHHHHHHHHHCHHHHC
GQLAQLQGLGIEAQQYADYQQSKRGRSKVWLDDMQRPVVDIVYDNHSRVSESLLEDTLGI
CCHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCEEEEEECCHHHHHHHHHHHHHCC
KPGQVVKREDLEAGVNQLYALNRFERVDAEFTDTPEGRVLTVSTKAKSWGPNYFDLGFNW
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCC
EDDFTADSAVTLDTAYTMTNLNENGGEWRNELKLGYEKLLGTEFYQPLDRDQEFYGRARY
CCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCEEE
QYEITAWELFDANNKVFEFDKDSHRIDMGLGLNFAQLGQLELGVTGEKGKISNEALLTED
EEEEEEEEEECCCCCEEEECCCCCEEEEECCCCHHHHCCEEEEECCCCCCCCCCEEEEEC
LTFSSYGGYFQIGYDSLNSISFPTSGNRVTLRVTVRKEDYDIDDYELESSTQVQADWKGA
CEECCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEECCCCCEEEECCCCC
LGVGNHAFVGKVSLESSDNDGESYVHLAELGGFLNLSGYRKDSLVGAHKVFGAFVYQYDL
CCCCCCEEEEEEEECCCCCCCCCEEEHHHHCCEEECCCCCCCHHHHHHHHHHEEEEEEEC
GRDALGMTDYPLYLGASLEAGNVWWEMDEVSLQDLIYAGSLYIGTDTDLGPAALGIGLTD
CCCCCCCCCCCEEEECEEECCCEEEEECCCCHHHHHEECEEEEECCCCCCCHHEEECCCC
DGQRSFYLFVGKNF
CCCEEEEEEEECCC
>Mature Secondary Structure
MKKLLSLLLLFPLSLAQAADRPKVGLVLSGGGAKGAAHVGVLKVLEEQNIPVDYVAGTSI
CHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCH
GAYVAGMYALGYSASEIEAIMMNVDWNRGYSDTIPREALSYRDKQLRDKYNIPLNIGYAD
HHHHHHHHHHCCCHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCC
AEVKAPSGVLRGQTMSLLLRESTDVVREFTSFDELAIPYRAVATDLATSQPVILSGGSVI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHCCCCCEEEECCHHH
KAMQASATVPGALQPMLIDGRLLVDGGIANNMPVDVVKAMGADVVIAVDIGSPLVGNEEL
HHHHHCCCCCCCCCCEEECCEEEEECCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCHHH
DSTIAVLNQLSTMLTAASTEAQKKLLTEKDVLIRPAIDALSTTDFSIMSTALSLGEEAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCHHHHHHHHHHCHHHHC
GQLAQLQGLGIEAQQYADYQQSKRGRSKVWLDDMQRPVVDIVYDNHSRVSESLLEDTLGI
CCHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCEEEEEECCHHHHHHHHHHHHHCC
KPGQVVKREDLEAGVNQLYALNRFERVDAEFTDTPEGRVLTVSTKAKSWGPNYFDLGFNW
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCC
EDDFTADSAVTLDTAYTMTNLNENGGEWRNELKLGYEKLLGTEFYQPLDRDQEFYGRARY
CCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCEEE
QYEITAWELFDANNKVFEFDKDSHRIDMGLGLNFAQLGQLELGVTGEKGKISNEALLTED
EEEEEEEEEECCCCCEEEECCCCCEEEEECCCCHHHHCCEEEEECCCCCCCCCCEEEEEC
LTFSSYGGYFQIGYDSLNSISFPTSGNRVTLRVTVRKEDYDIDDYELESSTQVQADWKGA
CEECCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEECCCCCEEEECCCCC
LGVGNHAFVGKVSLESSDNDGESYVHLAELGGFLNLSGYRKDSLVGAHKVFGAFVYQYDL
CCCCCCEEEEEEEECCCCCCCCCEEEHHHHCCEEECCCCCCCHHHHHHHHHHEEEEEEEC
GRDALGMTDYPLYLGASLEAGNVWWEMDEVSLQDLIYAGSLYIGTDTDLGPAALGIGLTD
CCCCCCCCCCCEEEECEEECCCEEEEECCCCHHHHHEECEEEEECCCCCCCHHEEECCCC
DGQRSFYLFVGKNF
CCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]