Click here to switch to the map view.

The map label for this gene is 119773447

Identifier: 119773447

GI number: 119773447

Start: 373545

End: 373943

Strand: Direct

Name: 119773447

Synonym: Sama_0306

Alternate gene names: NA

Gene position: 373545-373943 (Clockwise)

Preceding gene: 119773446

Following gene: 119773448

Centisome position: 8.67

GC content: 48.87

Gene sequence:

>399_bases
ATGTCTGTCGCAGATACTCAGTTCGTTCGCATCTACAAACGCAAGTCCAAATCTCCGTGGGATGACCACCACACCATGCT
GTTGCTGGCCGATGTGTTAGATAGTGATGAAGACTCAATCGAGCTCGGATTCTCACGCTACATCTACTTGCACCGCAATA
TCCTTGGCCAGATTTTGGGGATCAGTACCAGCAAATCCATTCAGGCAGAACACCCTGAGTTTGAAGGCCAATACCTGTCA
GGAACCGACATGTACGCCATCCTGCTGTGTTATCTGGATGAAATTGTACGCTTTTGTGACTTGTATCGGGATGAGTTCAG
ACTGGCGTTTGGGTTGACGCCGGAGGCCTTTTTTCAGGCCGCTGAGGACTTATGGATACATGAACTGTCGGAGGATTAA

Upstream 100 bases:

>100_bases
CGCTAACCCCTGAGCGAGCCAATTGGCTCGCTCTTTCTTTCGCCATTTTCCCACTCGCGAGCCTACCTATCTTCGAGGAC
ACATAATCAAGGAGACCAGT

Downstream 100 bases:

>100_bases
CCCTCCAAACTCAAAGCGCCCCTGTGGGGCGCTTTTCTATTAGGCAAGAAGCGGGTTACTTCTCAAGTTTTTTTGGCAGG
TATTGTACAAAAACCAACCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MSVADTQFVRIYKRKSKSPWDDHHTMLLLADVLDSDEDSIELGFSRYIYLHRNILGQILGISTSKSIQAEHPEFEGQYLS
GTDMYAILLCYLDEIVRFCDLYRDEFRLAFGLTPEAFFQAAEDLWIHELSED

Sequences:

>Translated_132_residues
MSVADTQFVRIYKRKSKSPWDDHHTMLLLADVLDSDEDSIELGFSRYIYLHRNILGQILGISTSKSIQAEHPEFEGQYLS
GTDMYAILLCYLDEIVRFCDLYRDEFRLAFGLTPEAFFQAAEDLWIHELSED
>Mature_131_residues
SVADTQFVRIYKRKSKSPWDDHHTMLLLADVLDSDEDSIELGFSRYIYLHRNILGQILGISTSKSIQAEHPEFEGQYLSG
TDMYAILLCYLDEIVRFCDLYRDEFRLAFGLTPEAFFQAAEDLWIHELSED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15390; Mature: 15259

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVADTQFVRIYKRKSKSPWDDHHTMLLLADVLDSDEDSIELGFSRYIYLHRNILGQILG
CCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC
ISTSKSIQAEHPEFEGQYLSGTDMYAILLCYLDEIVRFCDLYRDEFRLAFGLTPEAFFQA
CCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHH
AEDLWIHELSED
HHHHHHHHCCCC
>Mature Secondary Structure 
SVADTQFVRIYKRKSKSPWDDHHTMLLLADVLDSDEDSIELGFSRYIYLHRNILGQILG
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC
ISTSKSIQAEHPEFEGQYLSGTDMYAILLCYLDEIVRFCDLYRDEFRLAFGLTPEAFFQA
CCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHH
AEDLWIHELSED
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA