| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is cutC [H]
Identifier: 119773442
GI number: 119773442
Start: 364555
End: 365352
Strand: Direct
Name: cutC [H]
Synonym: Sama_0301
Alternate gene names: 119773442
Gene position: 364555-365352 (Clockwise)
Preceding gene: 119773441
Following gene: 119773443
Centisome position: 8.47
GC content: 60.4
Gene sequence:
>798_bases ATGATAGCGCTGGAAGTGTGCATCGATGCCGATGACCTGCTCGCGCTGCCTGCGGATGTGGCAGCTGCCAAAGCGGGCGG CGCCGTGCGCATCGAGCTCTGCGGGCACATGCAGCATCAGGGGCTGACGCCCTCAGACGCCGCCATGGGCATTGCCCGGG AGGCTTTTACCGCCGTGCCAGGCCTTCTGGTGATGATAAGACCCAGAGCAGGCGATTTTTGCTATTCGGCCAGCGAGCTT GCTCAGATGCAAGACGACCTCTATCGGGCAGCCGGGCAGGGTGCCAATGGCGTAGTACTTGGGGCGCTGGACAGCCACAA CCAGCTGGATATCAAGGCGTTGTCTCCACTTTTGGCCTTGGCGCAGCATCTCTCTCTGGAGGTGACCTTTCATCGGGCCT TTGATGCCATCGAAAACCCATTTGCGGCGCTGGAGCAACTTATCGACCTTGGGGTATCGCGGGTTCTCAGTGCCGGTACG CCATGGGGTTCAGGGCTTGGTGTTCTTGACGGCTTACCCCGGCTGGCGACGCTGCTGACACAGGCGGCAGGGCGCATTGA ACTGGTCGCGGGCGGTGGTGTGGGCCCTGACAACGTGGTGCAGATACTGCGCGAGCTGGGTGTCAACCAAGGTCCCTGGT CGCTGCACTCTTACTCCGCCGTACTCGATGCACCCTCAGCCAATTCAGACAAGGTCTGTTCGGGCCGCGTGAGCCAGGCA AAGGTGGCTGAGCTGGTAGCCAATATTCAGGCCAATACCTTATTACAAGTGCCGCAAGGGCGGACTTTTACATGTTGA
Upstream 100 bases:
>100_bases GGCTTTCGGGTCTTAAAGGGAAAAAGCTGGTGGTTATCGCACTGCAAGCCGATGGCAGCGCGAGCATCAATGCCCATCTT GGCCATTTGGAGCTGTTGCC
Downstream 100 bases:
>100_bases AGAGCATTATGACAACACATTCCTTCGAGCCTTTTGGTCAATCTCTGAACTCTTTGGGGCAATCAATGGACCTGGGCGGC CAGTGGCAATTTCGTCAGCA
Product: CutC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MIALEVCIDADDLLALPADVAAAKAGGAVRIELCGHMQHQGLTPSDAAMGIAREAFTAVPGLLVMIRPRAGDFCYSASEL AQMQDDLYRAAGQGANGVVLGALDSHNQLDIKALSPLLALAQHLSLEVTFHRAFDAIENPFAALEQLIDLGVSRVLSAGT PWGSGLGVLDGLPRLATLLTQAAGRIELVAGGGVGPDNVVQILRELGVNQGPWSLHSYSAVLDAPSANSDKVCSGRVSQA KVAELVANIQANTLLQVPQGRTFTC
Sequences:
>Translated_265_residues MIALEVCIDADDLLALPADVAAAKAGGAVRIELCGHMQHQGLTPSDAAMGIAREAFTAVPGLLVMIRPRAGDFCYSASEL AQMQDDLYRAAGQGANGVVLGALDSHNQLDIKALSPLLALAQHLSLEVTFHRAFDAIENPFAALEQLIDLGVSRVLSAGT PWGSGLGVLDGLPRLATLLTQAAGRIELVAGGGVGPDNVVQILRELGVNQGPWSLHSYSAVLDAPSANSDKVCSGRVSQA KVAELVANIQANTLLQVPQGRTFTC >Mature_265_residues MIALEVCIDADDLLALPADVAAAKAGGAVRIELCGHMQHQGLTPSDAAMGIAREAFTAVPGLLVMIRPRAGDFCYSASEL AQMQDDLYRAAGQGANGVVLGALDSHNQLDIKALSPLLALAQHLSLEVTFHRAFDAIENPFAALEQLIDLGVSRVLSAGT PWGSGLGVLDGLPRLATLLTQAAGRIELVAGGGVGPDNVVQILRELGVNQGPWSLHSYSAVLDAPSANSDKVCSGRVSQA KVAELVANIQANTLLQVPQGRTFTC
Specific function: Involved in copper homeostasis [H]
COG id: COG3142
COG function: function code P; Uncharacterized protein involved in copper resistance
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CutC family [H]
Homologues:
Organism=Homo sapiens, GI148596990, Length=214, Percent_Identity=38.785046728972, Blast_Score=136, Evalue=2e-32, Organism=Escherichia coli, GI87081995, Length=195, Percent_Identity=35.8974358974359, Blast_Score=102, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17556905, Length=238, Percent_Identity=33.6134453781513, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI21355415, Length=206, Percent_Identity=33.495145631068, Blast_Score=89, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005627 [H]
Pfam domain/function: PF03932 CutC [H]
EC number: NA
Molecular weight: Translated: 27520; Mature: 27520
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIALEVCIDADDLLALPADVAAAKAGGAVRIELCGHMQHQGLTPSDAAMGIAREAFTAVP CEEEEEEECCHHHHCCCHHHHHHCCCCEEEEEEECCHHHCCCCCCHHHHHHHHHHHHHCC GLLVMIRPRAGDFCYSASELAQMQDDLYRAAGQGANGVVLGALDSHNQLDIKALSPLLAL CEEEEEECCCCCHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHH AQHLSLEVTFHRAFDAIENPFAALEQLIDLGVSRVLSAGTPWGSGLGVLDGLPRLATLLT HHHHCEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCHHHHHHHHH QAAGRIELVAGGGVGPDNVVQILRELGVNQGPWSLHSYSAVLDAPSANSDKVCSGRVSQA HCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHH KVAELVANIQANTLLQVPQGRTFTC HHHHHHHHCCCCEEEECCCCCCCCC >Mature Secondary Structure MIALEVCIDADDLLALPADVAAAKAGGAVRIELCGHMQHQGLTPSDAAMGIAREAFTAVP CEEEEEEECCHHHHCCCHHHHHHCCCCEEEEEEECCHHHCCCCCCHHHHHHHHHHHHHCC GLLVMIRPRAGDFCYSASELAQMQDDLYRAAGQGANGVVLGALDSHNQLDIKALSPLLAL CEEEEEECCCCCHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHH AQHLSLEVTFHRAFDAIENPFAALEQLIDLGVSRVLSAGTPWGSGLGVLDGLPRLATLLT HHHHCEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCHHHHHHHHH QAAGRIELVAGGGVGPDNVVQILRELGVNQGPWSLHSYSAVLDAPSANSDKVCSGRVSQA HCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHH KVAELVANIQANTLLQVPQGRTFTC HHHHHHHHCCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12663928 [H]