Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773416

Identifier: 119773416

GI number: 119773416

Start: 316580

End: 317083

Strand: Direct

Name: 119773416

Synonym: Sama_0275

Alternate gene names: NA

Gene position: 316580-317083 (Clockwise)

Preceding gene: 119773412

Following gene: 119773417

Centisome position: 7.35

GC content: 51.19

Gene sequence:

>504_bases
ATGAACACATATCCACGCAGTTTTTCTCACATCGGTATTTCTGTGCCCGATCTTGAGGCCGCAGTGAAGTTTTACACCGA
GGTACTCGGTTGGTATCTCATCATGCCGCCCACCGAGATTGTGGAAGACGACTCCGCCATCGGCGAAATGTGTACCGATG
TGTTTGGTGCTGGCTGGGAGCGTTTTCGCATCGCCCACCTGTCCACCGGTGACCGTATCGGGGTTGAGCTGTTCGAGTTT
AAAAACCAAGAGAACCCGGAAGACAACTTCGAATACTGGAAAACCGGTATCTTCCATTTCTGCGTGCAGGACCCGGATGT
GGAAGGCCTGGCCGAGAAAATCGTTGCCGCCGGTGGTAAAAAGCGCATGAAGGCCCCGCGCTACTATTACCCGGGTGAAA
AGCCTTACCGCATGATTTATATGGAAGATCCCTTTGGAAATATCCTTGAGATTTACAGCCACAGTTATGAGCTGCACTAT
TCGAGTGGTGCTTATACCGGCTAA

Upstream 100 bases:

>100_bases
TCGCATCGGGCAAGGCCCCTGCGTCAGCGCAACGGACCAAGAGTGCGCAAGCAAGACCAGGCGAGCTCAGCCCTTCATTG
CAAAGCATACGAGGTTAGCC

Downstream 100 bases:

>100_bases
GCGTTTTCAGGCTGCCGCCTTTGGTTGATTTGATTCAGCCGTTACCATTGAGCCCCCAGTTTTCTGGTCCCAGAGCCGAG
ACTGCGGGCTTTTTTGTGTC

Product: glyoxalase/bleomycin resistance protein/dioxygenase

Products: NA

Alternate protein names: Glyoxalase Family Protein; Lactoylglutathione Lyase; Lactoylglutathione Lyase Family Protein; Glyoxalase/Bleomycin Resistance Protein; Dioxygenase Superfamily Protein

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MNTYPRSFSHIGISVPDLEAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGAGWERFRIAHLSTGDRIGVELFEF
KNQENPEDNFEYWKTGIFHFCVQDPDVEGLAEKIVAAGGKKRMKAPRYYYPGEKPYRMIYMEDPFGNILEIYSHSYELHY
SSGAYTG

Sequences:

>Translated_167_residues
MNTYPRSFSHIGISVPDLEAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGAGWERFRIAHLSTGDRIGVELFEF
KNQENPEDNFEYWKTGIFHFCVQDPDVEGLAEKIVAAGGKKRMKAPRYYYPGEKPYRMIYMEDPFGNILEIYSHSYELHY
SSGAYTG
>Mature_167_residues
MNTYPRSFSHIGISVPDLEAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGAGWERFRIAHLSTGDRIGVELFEF
KNQENPEDNFEYWKTGIFHFCVQDPDVEGLAEKIVAAGGKKRMKAPRYYYPGEKPYRMIYMEDPFGNILEIYSHSYELHY
SSGAYTG

Specific function: Unknown

COG id: COG0346

COG function: function code E; Lactoylglutathione lyase and related lyases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19210; Mature: 19210

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTYPRSFSHIGISVPDLEAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGAGWE
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEECCCHHHHCCCHHHHHHHHHHHHCCHH
RFRIAHLSTGDRIGVELFEFKNQENPEDNFEYWKTGIFHFCVQDPDVEGLAEKIVAAGGK
HEEEEECCCCCCCCHHHEECCCCCCCCCHHHHHHHHHEEEEECCCCHHHHHHHHHHCCCH
KRMKAPRYYYPGEKPYRMIYMEDPFGNILEIYSHSYELHYSSGAYTG
HHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCEEEEECCCCCCC
>Mature Secondary Structure
MNTYPRSFSHIGISVPDLEAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGAGWE
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEECCCHHHHCCCHHHHHHHHHHHHCCHH
RFRIAHLSTGDRIGVELFEFKNQENPEDNFEYWKTGIFHFCVQDPDVEGLAEKIVAAGGK
HEEEEECCCCCCCCHHHEECCCCCCCCCHHHHHHHHHEEEEECCCCHHHHHHHHHHCCCH
KRMKAPRYYYPGEKPYRMIYMEDPFGNILEIYSHSYELHYSSGAYTG
HHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA