| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is argG
Identifier: 119773400
GI number: 119773400
Start: 296823
End: 298046
Strand: Direct
Name: argG
Synonym: Sama_0259
Alternate gene names: 119773400
Gene position: 296823-298046 (Clockwise)
Preceding gene: 119773399
Following gene: 119773401
Centisome position: 6.89
GC content: 57.52
Gene sequence:
>1224_bases ATGGCAATCGAAAACAGCAAAACCGGCGTCAAGAAAGTAGTACTGGCCTATTCAGGCGGTCTGGACACCTCGGCCATCAT TCCGTGGTTGAAGGAAAACTATGATAACTGCGAAATCGTCGCCTTCTGTGCCGACGTGGGCCAGGGTGAAGAAGAGCTGG TGGGCCTGACCGAAAAGGCCCTTGCCTCAGGTGCGAGTGAGTGTCACATCGTTGACCTGAAAGAAGAATTTGTTAAAGAC TACATCTACCCCACCATAGCCACTGGTGCCATTTACGAAGGTACTTATCTGCTGGGTACCTCCATGGCCCGTCCTATCAT CGCCAAGGCGCAGGTAGAAGTGGCCCGTAAAGTGGGCGCCGATGCCCTGTGCCACGGTTGCACCGGTAAGGGTAATGACC AGGTGCGTTTCGAAGGCTGCTTCGCTGCGCTTGCGCCCGATTTGAAAGTGATTGCCCCATGGCGTGAGTGGGACATGGAA AGCCGTGAAGATCTGCTGGCGTATCTCGCCGAGCGCAACATCAAGACCTCGGCCTCTGCCACCAAGATTTACAGCCGCGA TGCCAACGCCTGGCACATCTCCCACGAAGGTGGCGAGCTGGAAGACCCTTGGAACGAGCCATCCAAGCAGGTATGGACCA TGACTGTGGACCCGCTGGATGCGCCTGACGAGCCTGAGTACGTGACCCTCAAGATTGAAAATGCCCGGGTGACCGAGGTG AATGGCGAGGCCCTGAGCCCATATCAGGCGCTGATGAAGCTTAACGCCATTGCCGCGCCCCATGGCGTTGGCCGTATCGA CATTACCGAAAACCGCCTGGTGGGCATGAAGTCCCGCGGCTGCTACGAAACCCCCGGCGGTACCGTGATGTTTGCTGCCC TGCGTGCGGTGGAAGAGCTGGTGCTGGACAAGAGCAGCCGTGAATGGCGTGAGCAGGTTGCCGCCCGTATGGCGCACCTG GTTTATGACGGCCGTTGGTTCACGCCTCTGTGTGACTCTCTGCTGGCCGCCTCCGAGTCGCTGGCGACCATGGTCAACGG TGAGGTAGTGGTTAAGCTCTATAAGGGGCAGGCCGTTCCTGTGAAGAAGCGTTCACCCAACAGCCTCTACTCAGAAGCCT TTGCCACCTTTGGTCAGGACAGCGTGTACGATCAGAAACACGCCGAAGGCTTTATCCGCCTTTACTCGCTGGCAAGCCGC ATCCGCGCTTACAACACCAAGTAA
Upstream 100 bases:
>100_bases AGAACCGCATGCACGCACAAAACGCAGTGTTGGTCACACTGCTGGGATAAATTCAATCTATTGAGTCAACGGCGCCCCAC GCGCCTCTTGGGAAACAGTT
Downstream 100 bases:
>100_bases GCCGCCTTGTCAGTCAGGGGGCCAATTTGGCCCCCATTCATTTTTAGTTCCGGGCACGCCCGGGCAGAAGGAGAATTGCT ATGGCCTTGTGGGGCGGCAG
Product: argininosuccinate synthase
Products: NA
Alternate protein names: Citrulline--aspartate ligase
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MAIENSKTGVKKVVLAYSGGLDTSAIIPWLKENYDNCEIVAFCADVGQGEEELVGLTEKALASGASECHIVDLKEEFVKD YIYPTIATGAIYEGTYLLGTSMARPIIAKAQVEVARKVGADALCHGCTGKGNDQVRFEGCFAALAPDLKVIAPWREWDME SREDLLAYLAERNIKTSASATKIYSRDANAWHISHEGGELEDPWNEPSKQVWTMTVDPLDAPDEPEYVTLKIENARVTEV NGEALSPYQALMKLNAIAAPHGVGRIDITENRLVGMKSRGCYETPGGTVMFAALRAVEELVLDKSSREWREQVAARMAHL VYDGRWFTPLCDSLLAASESLATMVNGEVVVKLYKGQAVPVKKRSPNSLYSEAFATFGQDSVYDQKHAEGFIRLYSLASR IRAYNTK
Sequences:
>Translated_407_residues MAIENSKTGVKKVVLAYSGGLDTSAIIPWLKENYDNCEIVAFCADVGQGEEELVGLTEKALASGASECHIVDLKEEFVKD YIYPTIATGAIYEGTYLLGTSMARPIIAKAQVEVARKVGADALCHGCTGKGNDQVRFEGCFAALAPDLKVIAPWREWDME SREDLLAYLAERNIKTSASATKIYSRDANAWHISHEGGELEDPWNEPSKQVWTMTVDPLDAPDEPEYVTLKIENARVTEV NGEALSPYQALMKLNAIAAPHGVGRIDITENRLVGMKSRGCYETPGGTVMFAALRAVEELVLDKSSREWREQVAARMAHL VYDGRWFTPLCDSLLAASESLATMVNGEVVVKLYKGQAVPVKKRSPNSLYSEAFATFGQDSVYDQKHAEGFIRLYSLASR IRAYNTK >Mature_406_residues AIENSKTGVKKVVLAYSGGLDTSAIIPWLKENYDNCEIVAFCADVGQGEEELVGLTEKALASGASECHIVDLKEEFVKDY IYPTIATGAIYEGTYLLGTSMARPIIAKAQVEVARKVGADALCHGCTGKGNDQVRFEGCFAALAPDLKVIAPWREWDMES REDLLAYLAERNIKTSASATKIYSRDANAWHISHEGGELEDPWNEPSKQVWTMTVDPLDAPDEPEYVTLKIENARVTEVN GEALSPYQALMKLNAIAAPHGVGRIDITENRLVGMKSRGCYETPGGTVMFAALRAVEELVLDKSSREWREQVAARMAHLV YDGRWFTPLCDSLLAASESLATMVNGEVVVKLYKGQAVPVKKRSPNSLYSEAFATFGQDSVYDQKHAEGFIRLYSLASRI RAYNTK
Specific function: Arginine biosynthesis; seventh step. [C]
COG id: COG0137
COG function: function code E; Argininosuccinate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the argininosuccinate synthase family. Type 1 subfamily
Homologues:
Organism=Homo sapiens, GI53759107, Length=403, Percent_Identity=41.6873449131514, Blast_Score=296, Evalue=3e-80, Organism=Homo sapiens, GI16950633, Length=403, Percent_Identity=41.6873449131514, Blast_Score=296, Evalue=3e-80, Organism=Escherichia coli, GI1789563, Length=369, Percent_Identity=27.3712737127371, Blast_Score=127, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6324514, Length=408, Percent_Identity=41.1764705882353, Blast_Score=302, Evalue=7e-83, Organism=Drosophila melanogaster, GI21358151, Length=408, Percent_Identity=41.6666666666667, Blast_Score=300, Evalue=8e-82,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): ASSY_SHEAM (A1S264)
Other databases:
- EMBL: CP000507 - RefSeq: YP_926140.1 - ProteinModelPortal: A1S264 - SMR: A1S264 - STRING: A1S264 - GeneID: 4602515 - GenomeReviews: CP000507_GR - KEGG: saz:Sama_0259 - NMPDR: fig|326297.7.peg.249 - eggNOG: COG0137 - HOGENOM: HBG335267 - OMA: VAVDVGQ - PhylomeDB: A1S264 - ProtClustDB: PRK00509 - GO: GO:0005737 - HAMAP: MF_00005 - InterPro: IPR001518 - InterPro: IPR018223 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR11587 - TIGRFAMs: TIGR00032
Pfam domain/function: PF00764 Arginosuc_synth
EC number: =6.3.4.5
Molecular weight: Translated: 44791; Mature: 44660
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS00564 ARGININOSUCCIN_SYN_1; PS00565 ARGININOSUCCIN_SYN_2
Important sites: BINDING 44-44 BINDING 96-96 BINDING 101-101 BINDING 126-126 BINDING 128-128 BINDING 132-132 BINDING 132-132 BINDING 133-133 BINDING 136-136 BINDING 185-185 BINDING 194-194 BINDING 270-270 BINDING 282-282
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIENSKTGVKKVVLAYSGGLDTSAIIPWLKENYDNCEIVAFCADVGQGEEELVGLTEKA CCCCCCCCCHHEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHH LASGASECHIVDLKEEFVKDYIYPTIATGAIYEGTYLLGTSMARPIIAKAQVEVARKVGA HHCCCCCEEEECHHHHHHHHHHCHHHCCCCEECCEEEECCHHCCHHHHHHHHHHHHHHCH DALCHGCTGKGNDQVRFEGCFAALAPDLKVIAPWREWDMESREDLLAYLAERNIKTSASA HHHHCCCCCCCCCCEEEEEEHHHHCCCCEEEECHHHCCCCCHHHHHHHHHHCCCCCCCCH TKIYSRDANAWHISHEGGELEDPWNEPSKQVWTMTVDPLDAPDEPEYVTLKIENARVTEV HHHEECCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCEEEEC NGEALSPYQALMKLNAIAAPHGVGRIDITENRLVGMKSRGCYETPGGTVMFAALRAVEEL CCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCEECCCCCCCCCCCCCHHHHHHHHHHHHH VLDKSSREWREQVAARMAHLVYDGRWFTPLCDSLLAASESLATMVNGEVVVKLYKGQAVP HHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCC VKKRSPNSLYSEAFATFGQDSVYDQKHAEGFIRLYSLASRIRAYNTK CCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AIENSKTGVKKVVLAYSGGLDTSAIIPWLKENYDNCEIVAFCADVGQGEEELVGLTEKA CCCCCCCCHHEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHH LASGASECHIVDLKEEFVKDYIYPTIATGAIYEGTYLLGTSMARPIIAKAQVEVARKVGA HHCCCCCEEEECHHHHHHHHHHCHHHCCCCEECCEEEECCHHCCHHHHHHHHHHHHHHCH DALCHGCTGKGNDQVRFEGCFAALAPDLKVIAPWREWDMESREDLLAYLAERNIKTSASA HHHHCCCCCCCCCCEEEEEEHHHHCCCCEEEECHHHCCCCCHHHHHHHHHHCCCCCCCCH TKIYSRDANAWHISHEGGELEDPWNEPSKQVWTMTVDPLDAPDEPEYVTLKIENARVTEV HHHEECCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCEEEEC NGEALSPYQALMKLNAIAAPHGVGRIDITENRLVGMKSRGCYETPGGTVMFAALRAVEEL CCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCEECCCCCCCCCCCCCHHHHHHHHHHHHH VLDKSSREWREQVAARMAHLVYDGRWFTPLCDSLLAASESLATMVNGEVVVKLYKGQAVP HHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCC VKKRSPNSLYSEAFATFGQDSVYDQKHAEGFIRLYSLASRIRAYNTK CCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA