Click here to switch to the map view.

The map label for this gene is pspA [C]

Identifier: 119717376

GI number: 119717376

Start: 3353451

End: 3354233

Strand: Reverse

Name: pspA [C]

Synonym: Noca_3152

Alternate gene names: 119717376

Gene position: 3354233-3353451 (Counterclockwise)

Preceding gene: 119717378

Following gene: 119717375

Centisome position: 67.27

GC content: 70.37

Gene sequence:

>783_bases
ATGGGTATGTGGCAGCGCATCAGCCTGATCTTCCGCTCGAAGGCCAACAAGGCCCTCGACCGTGCCGAGGACCCGCGCGA
GACCCTCGACTACAGCTACCAGCGCCAGCTGGAGCTGCTCTCCAAGGTGCGTCGCGGCGTCGCCGACGTGGCGACCAGTC
GCAAGCGCGTGGAGCTGCAGATCAACCAGCTCGAGCAGCAGTCCGGCAAGCTCCAGGACCAGGCCCAGAAGGCGATCGCG
ATGGACCGCGAGGACCTGGCCCGCGAGGCGCTGACCCGCAAGTCGGGGCTCACCACCCAGATCAACGACCTCAAGGCGCA
GCACGCTCAGCTCCAGGGCGAGGAGGAGAAGCTCACCCTGGCCCAGCAGCGGCTGCAGGCCAAGGTCGAGGCCTTCCGGA
CCCGCAAGGAGACGATCAAGGCGACCTACACCGCCGCCGAGGCCCAGACCCGGATCAACGAGGCGATGTCCGGCATCGGC
GACGAGATGGGCGACGTCGGCGCGGCGATCCAGCGCGCCGAGGACAAGACCGCGCAGATGCAGGCGCGGGCCGGCGCGAT
CGACGAGCTGATCGCCTCCGGCGCCCTCGACGACGTCAGCGCCGTGAGCTCGGGCGACGACATCGCCCGCGAGCTGGACG
CGCTGAGCTCGCAGGCCGACGTCGAGGCCGAGCTCGCCGCGCTCAAGGCCGGCTCGGCGCCGCAGGCGATCGAGCCCGCC
GAGGACGGCGCGATCCTCCAAGCGGAGGGCGAGAAGGAGACCACCGAGGGGAACCAGGCCTGA

Upstream 100 bases:

>100_bases
CGGCGCGGTCGCGGGTCCTTGCCCCGAAGCTTGGCATTGAGCCTAGGCTGGGGCACCGACCGGCGTACGCCGACGACTGA
CTGGAGAGGGATCCGTCCTC

Downstream 100 bases:

>100_bases
GCCCTGGCCGTTGTCCTTGGTGAGACCGACTTGGTGACACCGGGAGAATGGACACATGGCACGCACGCGTTTCGTCGGCG
ACGCCGGGCTGACCGCCCGG

Product: PspA/IM30 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MGMWQRISLIFRSKANKALDRAEDPRETLDYSYQRQLELLSKVRRGVADVATSRKRVELQINQLEQQSGKLQDQAQKAIA
MDREDLAREALTRKSGLTTQINDLKAQHAQLQGEEEKLTLAQQRLQAKVEAFRTRKETIKATYTAAEAQTRINEAMSGIG
DEMGDVGAAIQRAEDKTAQMQARAGAIDELIASGALDDVSAVSSGDDIARELDALSSQADVEAELAALKAGSAPQAIEPA
EDGAILQAEGEKETTEGNQA

Sequences:

>Translated_260_residues
MGMWQRISLIFRSKANKALDRAEDPRETLDYSYQRQLELLSKVRRGVADVATSRKRVELQINQLEQQSGKLQDQAQKAIA
MDREDLAREALTRKSGLTTQINDLKAQHAQLQGEEEKLTLAQQRLQAKVEAFRTRKETIKATYTAAEAQTRINEAMSGIG
DEMGDVGAAIQRAEDKTAQMQARAGAIDELIASGALDDVSAVSSGDDIARELDALSSQADVEAELAALKAGSAPQAIEPA
EDGAILQAEGEKETTEGNQA
>Mature_259_residues
GMWQRISLIFRSKANKALDRAEDPRETLDYSYQRQLELLSKVRRGVADVATSRKRVELQINQLEQQSGKLQDQAQKAIAM
DREDLAREALTRKSGLTTQINDLKAQHAQLQGEEEKLTLAQQRLQAKVEAFRTRKETIKATYTAAEAQTRINEAMSGIGD
EMGDVGAAIQRAEDKTAQMQARAGAIDELIASGALDDVSAVSSGDDIARELDALSSQADVEAELAALKAGSAPQAIEPAE
DGAILQAEGEKETTEGNQA

Specific function: The Phage Shock Protein (Psp) Operon (Pspabce) May Play A Significant Role In The Competition For Survival Under Nutrient- Or Energy-Limited Conditions. Pspa Has A Role As A Negative Regulator, Is Required For Efficient Translocation And Has An Unknown Fu

COG id: COG1842

COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspA/IM30 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007157 [H]

Pfam domain/function: PF04012 PspA_IM30 [H]

EC number: NA

Molecular weight: Translated: 28295; Mature: 28164

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMWQRISLIFRSKANKALDRAEDPRETLDYSYQRQLELLSKVRRGVADVATSRKRVELQ
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
INQLEQQSGKLQDQAQKAIAMDREDLAREALTRKSGLTTQINDLKAQHAQLQGEEEKLTL
HHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHH
AQQRLQAKVEAFRTRKETIKATYTAAEAQTRINEAMSGIGDEMGDVGAAIQRAEDKTAQM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QARAGAIDELIASGALDDVSAVSSGDDIARELDALSSQADVEAELAALKAGSAPQAIEPA
HHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCC
EDGAILQAEGEKETTEGNQA
CCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure 
GMWQRISLIFRSKANKALDRAEDPRETLDYSYQRQLELLSKVRRGVADVATSRKRVELQ
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
INQLEQQSGKLQDQAQKAIAMDREDLAREALTRKSGLTTQINDLKAQHAQLQGEEEKLTL
HHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHH
AQQRLQAKVEAFRTRKETIKATYTAAEAQTRINEAMSGIGDEMGDVGAAIQRAEDKTAQM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QARAGAIDELIASGALDDVSAVSSGDDIARELDALSSQADVEAELAALKAGSAPQAIEPA
HHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCC
EDGAILQAEGEKETTEGNQA
CCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]