Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119717374
Identifier: 119717374
GI number: 119717374
Start: 3351883
End: 3352461
Strand: Reverse
Name: 119717374
Synonym: Noca_3150
Alternate gene names: NA
Gene position: 3352461-3351883 (Counterclockwise)
Preceding gene: 119717375
Following gene: 119717371
Centisome position: 67.24
GC content: 73.23
Gene sequence:
>579_bases ATGGGTTTCTGGGACGTCATCGCCGGCCGCAGCCGGCCCAAGGCCGCGAACCTCGACTCGCTCTTCCTCGTGCCCAGCGC GGCGATCACCCTGCAGACGGCGATCGGGCTGACCCCCACCGGCGAGGGCTCGGTCTGCTACCGCGCCGCGACGGGAGCGG CCTTCCAGCAGACCCAGGACGACGTCGTCGCGCTCCTCGACGCCGACCCGGACGCCCCCGACGTGGCGGTCTCGCGCGAC GAGTACGGCTTCACGTGGCTGGTCGCACACCGCGACCCCGCCGACATGGCGGGGCTCTGCACCGACCTGCACGCGGTCAA CACGGCGTTGGAGGCGCAGGACTTCGGCTCCGGCCTGCTGTGCTCCCTGGTGCCGTTCGCGGACACCAGCGGCCGGCGGG TCGGGTTGGTCTACCTCTACAAGCAGGGCACCTTCTACGCGTTCGCGCCCGTGCCCGGCGGCGAGCGCCGGCGCGACAAC CTCCTGGAGATCCAGGTGCGCGACACCCTCGCCGCCGAGCTGCCGATGGAGCGCGACCTGGGCCGCTGGCTCGCGGTCTG GGGCGCCCCCGGGCTGTAG
Upstream 100 bases:
>100_bases TCGCTGCGCACCCTGACCTCGACCCACCCGACCCTCGAGCAGCGGCTCGAGCAGCTCGCCAAGATCCAGGCCGAGCTCGG CCGCCCGGCGGCCTGACCGC
Downstream 100 bases:
>100_bases CCGCCGCCGGTCGAGCTCGTCGAGGCACGGTCGCGGCACGGGCCTGGGTCGCGACCCGAACGCGGGGCAGTTCGGCCGGG ATTGTGACCTGGTACGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MGFWDVIAGRSRPKAANLDSLFLVPSAAITLQTAIGLTPTGEGSVCYRAATGAAFQQTQDDVVALLDADPDAPDVAVSRD EYGFTWLVAHRDPADMAGLCTDLHAVNTALEAQDFGSGLLCSLVPFADTSGRRVGLVYLYKQGTFYAFAPVPGGERRRDN LLEIQVRDTLAAELPMERDLGRWLAVWGAPGL
Sequences:
>Translated_192_residues MGFWDVIAGRSRPKAANLDSLFLVPSAAITLQTAIGLTPTGEGSVCYRAATGAAFQQTQDDVVALLDADPDAPDVAVSRD EYGFTWLVAHRDPADMAGLCTDLHAVNTALEAQDFGSGLLCSLVPFADTSGRRVGLVYLYKQGTFYAFAPVPGGERRRDN LLEIQVRDTLAAELPMERDLGRWLAVWGAPGL >Mature_191_residues GFWDVIAGRSRPKAANLDSLFLVPSAAITLQTAIGLTPTGEGSVCYRAATGAAFQQTQDDVVALLDADPDAPDVAVSRDE YGFTWLVAHRDPADMAGLCTDLHAVNTALEAQDFGSGLLCSLVPFADTSGRRVGLVYLYKQGTFYAFAPVPGGERRRDNL LEIQVRDTLAAELPMERDLGRWLAVWGAPGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20586; Mature: 20455
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFWDVIAGRSRPKAANLDSLFLVPSAAITLQTAIGLTPTGEGSVCYRAATGAAFQQTQD CCHHHHHCCCCCCCCCCCCEEEECCCCEEEEEEHCCCCCCCCCCEEEEECCCCHHHCCCC DVVALLDADPDAPDVAVSRDEYGFTWLVAHRDPADMAGLCTDLHAVNTALEAQDFGSGLL CEEEEEECCCCCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEE CSLVPFADTSGRRVGLVYLYKQGTFYAFAPVPGGERRRDNLLEIQVRDTLAAELPMERDL EEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCCCCCCEEEEEECCHHHHHCCCCCCC GRWLAVWGAPGL CCEEEECCCCCC >Mature Secondary Structure GFWDVIAGRSRPKAANLDSLFLVPSAAITLQTAIGLTPTGEGSVCYRAATGAAFQQTQD CHHHHHCCCCCCCCCCCCEEEECCCCEEEEEEHCCCCCCCCCCEEEEECCCCHHHCCCC DVVALLDADPDAPDVAVSRDEYGFTWLVAHRDPADMAGLCTDLHAVNTALEAQDFGSGLL CEEEEEECCCCCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEE CSLVPFADTSGRRVGLVYLYKQGTFYAFAPVPGGERRRDNLLEIQVRDTLAAELPMERDL EEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCCCCCCEEEEEECCHHHHHCCCCCCC GRWLAVWGAPGL CCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA