Click here to switch to the map view.

The map label for this gene is yadR [C]

Identifier: 119717370

GI number: 119717370

Start: 3347998

End: 3348360

Strand: Reverse

Name: yadR [C]

Synonym: Noca_3146

Alternate gene names: 119717370

Gene position: 3348360-3347998 (Counterclockwise)

Preceding gene: 119717371

Following gene: 119717368

Centisome position: 67.16

GC content: 66.39

Gene sequence:

>363_bases
ATGACCGAGCAGGTCGAGACCACCACCGAGCACCGCACGGACCAGATCAACCTGAGCCCCGTGGCGGCCACCAAGGTGAA
GAGCCTTCTCGAGCAGGAGGGCCGCGACGACCTCGCGCTGCGCATCTCCGTGCAGCCGGGTGGCTGTTCGGGCCTGCGCT
ACCAGCTGTTCTTCGACGAGCGCAGCCTGGACGGCGACGTCGTCACCGACTTCGACGGCGTCTCCGTCGTCGTCGACCGG
ATGAGCGTCCCCTACCTCAACGGCGCGATGATCGACTTCGTCGACTCCATCGAGAAGCAGGGCTTCACCATCGACAACCC
CAACGCCAGCGGCTCCTGCGCCTGCGGCGACAGCTTCCACTGA

Upstream 100 bases:

>100_bases
CGTCAGTGACCGGAATACTCACGTCGATGACCGGAATAACCGGGCGTGTGCGACCATTGAGGCGGTAACACACCTTCCAC
AGACCTTGGGAGAACCGCAG

Downstream 100 bases:

>100_bases
CGAGCTGCAACCTGAACGACAGATCAGCCCCGGACCCATGGGTCCGGGGCTGATCTGTTGCTCGAGGTCGGGTCAGTCCC
CGTCGAGCTGGAGGTTGAGG

Product: iron-sulfur cluster assembly accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MTEQVETTTEHRTDQINLSPVAATKVKSLLEQEGRDDLALRISVQPGGCSGLRYQLFFDERSLDGDVVTDFDGVSVVVDR
MSVPYLNGAMIDFVDSIEKQGFTIDNPNASGSCACGDSFH

Sequences:

>Translated_120_residues
MTEQVETTTEHRTDQINLSPVAATKVKSLLEQEGRDDLALRISVQPGGCSGLRYQLFFDERSLDGDVVTDFDGVSVVVDR
MSVPYLNGAMIDFVDSIEKQGFTIDNPNASGSCACGDSFH
>Mature_119_residues
TEQVETTTEHRTDQINLSPVAATKVKSLLEQEGRDDLALRISVQPGGCSGLRYQLFFDERSLDGDVVTDFDGVSVVVDRM
SVPYLNGAMIDFVDSIEKQGFTIDNPNASGSCACGDSFH

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Homo sapiens, GI52426768, Length=105, Percent_Identity=32.3809523809524, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1786351, Length=104, Percent_Identity=41.3461538461538, Blast_Score=92, Evalue=6e-21,
Organism=Escherichia coli, GI1788877, Length=105, Percent_Identity=40.9523809523809, Blast_Score=81, Evalue=2e-17,
Organism=Escherichia coli, GI1787974, Length=105, Percent_Identity=31.4285714285714, Blast_Score=61, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71998452, Length=119, Percent_Identity=34.453781512605, Blast_Score=73, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6323001, Length=104, Percent_Identity=35.5769230769231, Blast_Score=70, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24642263, Length=106, Percent_Identity=38.6792452830189, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 13078; Mature: 12946

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEQVETTTEHRTDQINLSPVAATKVKSLLEQEGRDDLALRISVQPGGCSGLRYQLFFDE
CCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEECC
RSLDGDVVTDFDGVSVVVDRMSVPYLNGAMIDFVDSIEKQGFTIDNPNASGSCACGDSFH
CCCCCCEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
TEQVETTTEHRTDQINLSPVAATKVKSLLEQEGRDDLALRISVQPGGCSGLRYQLFFDE
CCCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEECC
RSLDGDVVTDFDGVSVVVDRMSVPYLNGAMIDFVDSIEKQGFTIDNPNASGSCACGDSFH
CCCCCCEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036; 11681203 [H]