Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119717336
Identifier: 119717336
GI number: 119717336
Start: 3314508
End: 3314948
Strand: Reverse
Name: 119717336
Synonym: Noca_3112
Alternate gene names: NA
Gene position: 3314948-3314508 (Counterclockwise)
Preceding gene: 119717346
Following gene: 119717335
Centisome position: 66.49
GC content: 66.67
Gene sequence:
>441_bases ATGGCCGAGCAGACCACGTCGTCGATCGTGATCGACGCCCCCTCGCCCGACATCATGGCGGTGATCGCCGACTTCCCCGC CTACCCGCACTGGGCCAAGGGCGTGCGGACCGCCGATGTCGTCGCCGAGTTCCCCGACGGACGCGCGGAGCAGGTCTTCT TCGAGCTCGACGTCCCGCCGATCAAGGACGAGTACACCCTCGAGTACGTCTGGAACGGCGACCACATGGTCACCTGGACG CTCGTGCACGGGAAGATGCTCCGTGCCCTGGACGGGGCCTACCTGCTGCGCGAGCTCGGCAACGGCTCGACGGAGGTCAC CTACCGCCTCGCCCTGGACGTCTCGATCCCGCTGATCGGGATGCTCAAGCGCAAGGGCGAGAAGATCCTCATCGACACGG CGCTGAAGGGGCTGAAGAAGCGCGTCGAGTCGCTCGACTGA
Upstream 100 bases:
>100_bases GCTCACCGAGCGAGGTTACCGCCGGTCGGACGGCCGGCGGGATCCGGTACGCTCGCTCACCGAGCCAGCCGCGAACAGAG TGCGACCAAGGGGGCCCCAG
Downstream 100 bases:
>100_bases GGGGGCGCTGGACCAGCTGACCGTGCGTATCCTCCTGTTCACCGGAAAGGGCGGCGTCGGCAAGTCCACGGTCGCCGCCG GGACGGCCGCGCTCGCGGCC
Product: cyclase/dehydrase
Products: NA
Alternate protein names: Polyketide Cyclase/Dehydrase; Cyclase; Polyketide Cyclase / Dehydrase Family Protein
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MAEQTTSSIVIDAPSPDIMAVIADFPAYPHWAKGVRTADVVAEFPDGRAEQVFFELDVPPIKDEYTLEYVWNGDHMVTWT LVHGKMLRALDGAYLLRELGNGSTEVTYRLALDVSIPLIGMLKRKGEKILIDTALKGLKKRVESLD
Sequences:
>Translated_146_residues MAEQTTSSIVIDAPSPDIMAVIADFPAYPHWAKGVRTADVVAEFPDGRAEQVFFELDVPPIKDEYTLEYVWNGDHMVTWT LVHGKMLRALDGAYLLRELGNGSTEVTYRLALDVSIPLIGMLKRKGEKILIDTALKGLKKRVESLD >Mature_145_residues AEQTTSSIVIDAPSPDIMAVIADFPAYPHWAKGVRTADVVAEFPDGRAEQVFFELDVPPIKDEYTLEYVWNGDHMVTWTL VHGKMLRALDGAYLLRELGNGSTEVTYRLALDVSIPLIGMLKRKGEKILIDTALKGLKKRVESLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16274; Mature: 16143
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQTTSSIVIDAPSPDIMAVIADFPAYPHWAKGVRTADVVAEFPDGRAEQVFFELDVPP CCCCCCCEEEEECCCCCEEEEEECCCCCCCHHCCCCHHHHEEECCCCCCCEEEEEECCCC IKDEYTLEYVWNGDHMVTWTLVHGKMLRALDGAYLLRELGNGSTEVTYRLALDVSIPLIG CCCCEEEEEEECCCEEEEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCHHH MLKRKGEKILIDTALKGLKKRVESLD HHHCCCCEEEEHHHHHHHHHHHHHCC >Mature Secondary Structure AEQTTSSIVIDAPSPDIMAVIADFPAYPHWAKGVRTADVVAEFPDGRAEQVFFELDVPP CCCCCCEEEEECCCCCEEEEEECCCCCCCHHCCCCHHHHEEECCCCCCCEEEEEECCCC IKDEYTLEYVWNGDHMVTWTLVHGKMLRALDGAYLLRELGNGSTEVTYRLALDVSIPLIG CCCCEEEEEEECCCEEEEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCHHH MLKRKGEKILIDTALKGLKKRVESLD HHHCCCCEEEEHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA