Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119717327
Identifier: 119717327
GI number: 119717327
Start: 3306922
End: 3307425
Strand: Reverse
Name: 119717327
Synonym: Noca_3103
Alternate gene names: NA
Gene position: 3307425-3306922 (Counterclockwise)
Preceding gene: 119717328
Following gene: 119717326
Centisome position: 66.34
GC content: 77.18
Gene sequence:
>504_bases TTGACGATCCACTCCGCGCACCCGTTCCTCGACCCGGAGCCCGACCCGGTCCGCCGGTTCCGCGGCCGGATCACCGGCAC CGTCGCCTTGGTGACCGCCGGTGACGACACCTCCCGGGCCGGCCTCACGGTGAGCTCGCTGATGGTCGCGAACGGCGAGC CGGCCCGGGTGCTCGCGCTCGTGGACCCCGACAGCGACCTGGCCGCGGTCGTCGCCCGCACCGGCCGCGCGGTCGTCCAG CTCCTCTCCTGGGTGCACCGCGACCTGGCGGAGGCGTTCGCCGGGACGGCGCCCGCGCCCGGCGGGCCGTTCCGCACGGC CGCCTTCGAGGAGACCGCGTGGGGGCCGCGGCTCGCCGACGCGTCGACCTGGGCGGGGGTGCGGCTGGAGTCGACCGCGG CGGTCGGCTGGTCCTCGCTGCTCACCCTCGCGATCGAGGAGGTCGTGGTCGGCGCGGACGACCAACCCCTGGTGCACCGC CGCGGCCGCTGGGTCCGCCCGTAG
Upstream 100 bases:
>100_bases ACATGTACGGCGCCCGGGCGAAGGAGGAGTCGCGGAAGAGCGAGAAGGACGCGGCCGCGCAGCAGGAGCCGGGTGAGCCC GACGAGCCCAAGCTCGCGTC
Downstream 100 bases:
>100_bases GGTCCTGCCATGGCCGAGCTGCTCGAGATCGCGGACGAGCTGTACGGCCTGCCGCTGGCCGAGTTCACCCCGGCGCGCGA CGCCCGGGTCAGGGAGCTCA
Product: flavin reductase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MTIHSAHPFLDPEPDPVRRFRGRITGTVALVTAGDDTSRAGLTVSSLMVANGEPARVLALVDPDSDLAAVVARTGRAVVQ LLSWVHRDLAEAFAGTAPAPGGPFRTAAFEETAWGPRLADASTWAGVRLESTAAVGWSSLLTLAIEEVVVGADDQPLVHR RGRWVRP
Sequences:
>Translated_167_residues MTIHSAHPFLDPEPDPVRRFRGRITGTVALVTAGDDTSRAGLTVSSLMVANGEPARVLALVDPDSDLAAVVARTGRAVVQ LLSWVHRDLAEAFAGTAPAPGGPFRTAAFEETAWGPRLADASTWAGVRLESTAAVGWSSLLTLAIEEVVVGADDQPLVHR RGRWVRP >Mature_166_residues TIHSAHPFLDPEPDPVRRFRGRITGTVALVTAGDDTSRAGLTVSSLMVANGEPARVLALVDPDSDLAAVVARTGRAVVQL LSWVHRDLAEAFAGTAPAPGGPFRTAAFEETAWGPRLADASTWAGVRLESTAAVGWSSLLTLAIEEVVVGADDQPLVHRR GRWVRP
Specific function: Unknown
COG id: COG1853
COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17695; Mature: 17564
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIHSAHPFLDPEPDPVRRFRGRITGTVALVTAGDDTSRAGLTVSSLMVANGEPARVLAL CCCCCCCCCCCCCCCHHHHHHCCCEEEEEEEECCCCCCCCCCEEEHEEEECCCCEEEEEE VDPDSDLAAVVARTGRAVVQLLSWVHRDLAEAFAGTAPAPGGPFRTAAFEETAWGPRLAD ECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC ASTWAGVRLESTAAVGWSSLLTLAIEEVVVGADDQPLVHRRGRWVRP CCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCC >Mature Secondary Structure TIHSAHPFLDPEPDPVRRFRGRITGTVALVTAGDDTSRAGLTVSSLMVANGEPARVLAL CCCCCCCCCCCCCCHHHHHHCCCEEEEEEEECCCCCCCCCCEEEHEEEECCCCEEEEEE VDPDSDLAAVVARTGRAVVQLLSWVHRDLAEAFAGTAPAPGGPFRTAAFEETAWGPRLAD ECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC ASTWAGVRLESTAAVGWSSLLTLAIEEVVVGADDQPLVHRRGRWVRP CCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA