Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119717323
Identifier: 119717323
GI number: 119717323
Start: 3302305
End: 3303606
Strand: Reverse
Name: 119717323
Synonym: Noca_3099
Alternate gene names: NA
Gene position: 3303606-3302305 (Counterclockwise)
Preceding gene: 119717326
Following gene: 119717322
Centisome position: 66.26
GC content: 72.2
Gene sequence:
>1302_bases ATGGCGATATCGGGTTGCCGACCACGCGGCCCGAGGCAGGAGGATGTGGGGGTGCTCGACCGCATCGGCGCCGCGCTGGG GTTCCCCTCCGTGGGCAACCACCGCAGGTTCGTCACCGCCATCGCCATCGACGCGATCGGCAGCGGTGTGTTCATGCCGG TCTCGATCCTCTACTTCCTCGTCACGACCGACCTGTCGCTCGTGCAGGTCGGGGCCGCGATCTCACTGGCGTCGGCGGTC GCGCTGCCCGCAGGCCCGCTGCTCGGTGGCCTGGTCGACCGCTACGGCGCCAAGCACGTGCTGCTCGCCGGCAACCTGCT CCAGACGGCCGGCTTCGTCGCCTACCTCGCGACCGACTCCTTCGTCGGCCTGACCCTGTGGACGGTCGTCGTGACGGTGG GCCGGACCGCCTTCTGGGGCTCCTACGGCAACATCGTCGCCGCGATCTCGGCGCCGGGAGAGCGGGAGAAGTGGTTCGGC TTCCTCGGGGCGCTGCGCAACGTCGGCTTCGCGGTCGGCGGGCTCGCGTCCGGCCTCGCGATCACGATCGGCACCACCAC GGCGTACTCGGCGGTCGTGCTGGCCAACGCCGTGTCGTACGTCGTCGCCTTCCTCCTGCTGCTGGCCGTGCCGCCGACGG CGAGTGTCGCGCACCGCGCGGTCGAGGGCGCGTGGGGCACCGTGCTGCGCGACCGGCCGTACCGGCTGCTGTGGGTCACC CAGATGGCCTACTCGACGGCGATGATGGTGCTGAACTTCGCGGTGCCCGTGTATGCGACCACCGTGCTCGGGCTCTCCGG CTGGGTCACCGGCGCGGTGTTCACGCTGAACACCGTGATGGTGGGCTTCGGCCAGGGGCTGACGGTCCGGGCGATGACCG GCGCGCTGCGCTGGCGGGTGCTGCTGCTCAGCAACCTGGTGTTCGCGGCCTCGTTCGTCGTGCTGCTCGGCGCGAGTCGG CTCTCGGTCGGGCTCGCCGCGGCGGTGGTGGTGCTCGGCTCGGGCATCTACACGCTGGGGGAGCTGCTCGGCGGGCCGGT GCTCGGCGCGCTGTCGGCGGAGGCCGCGCCGGAGCACCTGCGCGGGCGCTACCTCGCGCTGATCCAGCTGGCCTGGAACC TGGCCAGCACCGTGGCGCCGGTCGCCTTCGCCTGGCTCCTGGACCGCGGCCCGTCCCAGATCTGGGTCGCGCTGGTCGTG ATGTCGCTGGTCGGTGCCGGTCTGACCGTGCTGCTCGGCCGGGTGCTTCCGCACGCGGCTCAGGCGGTCACGAACCGGGC CGAGGAGCCGTTGCCGGCCTGA
Upstream 100 bases:
>100_bases CGGCGAGGAACTTGGAGGCCACGGCCACGCCCCAGGACTCACCGTCGGCGGACCGGGCCACGATCGAGAACGTCATGGCC CGACCCTAGAGGACGGCAGC
Downstream 100 bases:
>100_bases CCACCCTCCAGGAGACCGGGTCGAGGGTGAGGGCGACCGGCACCGGGTCCGCGTGGGTCCGGGGCATGGAACTCGAGGGC ACGGGGACTTTCCTACCGTG
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Transporter
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MAISGCRPRGPRQEDVGVLDRIGAALGFPSVGNHRRFVTAIAIDAIGSGVFMPVSILYFLVTTDLSLVQVGAAISLASAV ALPAGPLLGGLVDRYGAKHVLLAGNLLQTAGFVAYLATDSFVGLTLWTVVVTVGRTAFWGSYGNIVAAISAPGEREKWFG FLGALRNVGFAVGGLASGLAITIGTTTAYSAVVLANAVSYVVAFLLLLAVPPTASVAHRAVEGAWGTVLRDRPYRLLWVT QMAYSTAMMVLNFAVPVYATTVLGLSGWVTGAVFTLNTVMVGFGQGLTVRAMTGALRWRVLLLSNLVFAASFVVLLGASR LSVGLAAAVVVLGSGIYTLGELLGGPVLGALSAEAAPEHLRGRYLALIQLAWNLASTVAPVAFAWLLDRGPSQIWVALVV MSLVGAGLTVLLGRVLPHAAQAVTNRAEEPLPA
Sequences:
>Translated_433_residues MAISGCRPRGPRQEDVGVLDRIGAALGFPSVGNHRRFVTAIAIDAIGSGVFMPVSILYFLVTTDLSLVQVGAAISLASAV ALPAGPLLGGLVDRYGAKHVLLAGNLLQTAGFVAYLATDSFVGLTLWTVVVTVGRTAFWGSYGNIVAAISAPGEREKWFG FLGALRNVGFAVGGLASGLAITIGTTTAYSAVVLANAVSYVVAFLLLLAVPPTASVAHRAVEGAWGTVLRDRPYRLLWVT QMAYSTAMMVLNFAVPVYATTVLGLSGWVTGAVFTLNTVMVGFGQGLTVRAMTGALRWRVLLLSNLVFAASFVVLLGASR LSVGLAAAVVVLGSGIYTLGELLGGPVLGALSAEAAPEHLRGRYLALIQLAWNLASTVAPVAFAWLLDRGPSQIWVALVV MSLVGAGLTVLLGRVLPHAAQAVTNRAEEPLPA >Mature_432_residues AISGCRPRGPRQEDVGVLDRIGAALGFPSVGNHRRFVTAIAIDAIGSGVFMPVSILYFLVTTDLSLVQVGAAISLASAVA LPAGPLLGGLVDRYGAKHVLLAGNLLQTAGFVAYLATDSFVGLTLWTVVVTVGRTAFWGSYGNIVAAISAPGEREKWFGF LGALRNVGFAVGGLASGLAITIGTTTAYSAVVLANAVSYVVAFLLLLAVPPTASVAHRAVEGAWGTVLRDRPYRLLWVTQ MAYSTAMMVLNFAVPVYATTVLGLSGWVTGAVFTLNTVMVGFGQGLTVRAMTGALRWRVLLLSNLVFAASFVVLLGASRL SVGLAAAVVVLGSGIYTLGELLGGPVLGALSAEAAPEHLRGRYLALIQLAWNLASTVAPVAFAWLLDRGPSQIWVALVVM SLVGAGLTVLLGRVLPHAAQAVTNRAEEPLPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44861; Mature: 44730
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISGCRPRGPRQEDVGVLDRIGAALGFPSVGNHRRFVTAIAIDAIGSGVFMPVSILYFL CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH VTTDLSLVQVGAAISLASAVALPAGPLLGGLVDRYGAKHVLLAGNLLQTAGFVAYLATDS HHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHCCC FVGLTLWTVVVTVGRTAFWGSYGNIVAAISAPGEREKWFGFLGALRNVGFAVGGLASGLA HHHHHHHHHHHHHCCHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHCCCE ITIGTTTAYSAVVLANAVSYVVAFLLLLAVPPTASVAHRAVEGAWGTVLRDRPYRLLWVT EEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHH QMAYSTAMMVLNFAVPVYATTVLGLSGWVTGAVFTLNTVMVGFGQGLTVRAMTGALRWRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHH LLLSNLVFAASFVVLLGASRLSVGLAAAVVVLGSGIYTLGELLGGPVLGALSAEAAPEHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHCCCHHHH RGRYLALIQLAWNLASTVAPVAFAWLLDRGPSQIWVALVVMSLVGAGLTVLLGRVLPHAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH QAVTNRAEEPLPA HHHHHCCCCCCCC >Mature Secondary Structure AISGCRPRGPRQEDVGVLDRIGAALGFPSVGNHRRFVTAIAIDAIGSGVFMPVSILYFL CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH VTTDLSLVQVGAAISLASAVALPAGPLLGGLVDRYGAKHVLLAGNLLQTAGFVAYLATDS HHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHCCC FVGLTLWTVVVTVGRTAFWGSYGNIVAAISAPGEREKWFGFLGALRNVGFAVGGLASGLA HHHHHHHHHHHHHCCHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHCCCE ITIGTTTAYSAVVLANAVSYVVAFLLLLAVPPTASVAHRAVEGAWGTVLRDRPYRLLWVT EEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHH QMAYSTAMMVLNFAVPVYATTVLGLSGWVTGAVFTLNTVMVGFGQGLTVRAMTGALRWRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHH LLLSNLVFAASFVVLLGASRLSVGLAAAVVVLGSGIYTLGELLGGPVLGALSAEAAPEHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHCCCHHHH RGRYLALIQLAWNLASTVAPVAFAWLLDRGPSQIWVALVVMSLVGAGLTVLLGRVLPHAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH QAVTNRAEEPLPA HHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA