Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is smtA [H]
Identifier: 119717301
GI number: 119717301
Start: 3278322
End: 3279080
Strand: Reverse
Name: smtA [H]
Synonym: Noca_3077
Alternate gene names: 119717301
Gene position: 3279080-3278322 (Counterclockwise)
Preceding gene: 119717302
Following gene: 119717300
Centisome position: 65.77
GC content: 77.47
Gene sequence:
>759_bases ATGCCTCCTGACCGGCCCGGCGAACGGCCCAGCGAACGGCCCAGCGAACGGCGCACCGCGGCGCGTACGTCGGTGGTCTG GGACGCGCTGCTCCCGGCGCTGGACGGCGCCGCGCTCGACGTGCTCGACATCGGCGGCGGCACCGGGGGGTTCGCCGTCC GGGTCGCCGAGCTCGGCCACCGGGTGACGGTGGTCGACCCCAGCCCCGACGCGCTCGCGTCCCTGGACCGCCGGGCCCGC GAGGCCGGGGTCACGGTGGCCGGCCGGCAGGGCGACCTGTCCACCCTCCTCGACGTCACCGGCCCGGACGCCGCGGACGT CGTGCTGTGCCATGGGGTGCTCGAGGTCGTCGACGACCCCGGCGCCGCGCTCACCACGCTCCGCCGGGTGCTGCGCCCCG GCGGCACCCTCAGCCTCCTGGTCGGCCAGCGCCACGCCGCGGTCGTCGCCCGGGCGATGGCCGGGCACTTCGCCCAGGCG CTCGCGATGCTCGACCAGGCACCCGGCGGTCCGGCGCGGGACCACGGCGGCCGCTCCGGTCGCAGGTTCACCGAGGACGA GGTCACCGCCCTCGTCGATGGCGCCGGGTTCCAGGTCACCGCCGTGCACGGGATCCGGGTCTTCGCCGACCTGGTCCCGG GCTCCCTGCTGGACCTCGAGCCCGGGGCTGCCGCGGCCCTGGTCGACCTCGAGCGGGCGGTCTCCGAACGGGCCGAGTTC CGCCCGCTGGCGACCCAGTTGCACCTGCTCGCCCGCTGA
Upstream 100 bases:
>100_bases GCGTTCGCTCGGCCTGGTGCCGCATCCCGCGGCCTCGCCGTGGGCGGCGGCGGTGCGCGCCGGCTGACGGAGCGGCTCTC GGGGGTCCTAGGGTTGCCCC
Downstream 100 bases:
>100_bases CGCGGTTCGCCGGCGCGCGGGCCGGGAACGGTTCGGTCACGAATTTCCCGAACCCGCCTACCGCGATGACCACCCGCTGC CTAGACTTGAGGCGCTGGCC
Product: type 11 methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MPPDRPGERPSERPSERRTAARTSVVWDALLPALDGAALDVLDIGGGTGGFAVRVAELGHRVTVVDPSPDALASLDRRAR EAGVTVAGRQGDLSTLLDVTGPDAADVVLCHGVLEVVDDPGAALTTLRRVLRPGGTLSLLVGQRHAAVVARAMAGHFAQA LAMLDQAPGGPARDHGGRSGRRFTEDEVTALVDGAGFQVTAVHGIRVFADLVPGSLLDLEPGAAAALVDLERAVSERAEF RPLATQLHLLAR
Sequences:
>Translated_252_residues MPPDRPGERPSERPSERRTAARTSVVWDALLPALDGAALDVLDIGGGTGGFAVRVAELGHRVTVVDPSPDALASLDRRAR EAGVTVAGRQGDLSTLLDVTGPDAADVVLCHGVLEVVDDPGAALTTLRRVLRPGGTLSLLVGQRHAAVVARAMAGHFAQA LAMLDQAPGGPARDHGGRSGRRFTEDEVTALVDGAGFQVTAVHGIRVFADLVPGSLLDLEPGAAAALVDLERAVSERAEF RPLATQLHLLAR >Mature_251_residues PPDRPGERPSERPSERRTAARTSVVWDALLPALDGAALDVLDIGGGTGGFAVRVAELGHRVTVVDPSPDALASLDRRARE AGVTVAGRQGDLSTLLDVTGPDAADVVLCHGVLEVVDDPGAALTTLRRVLRPGGTLSLLVGQRHAAVVARAMAGHFAQAL AMLDQAPGGPARDHGGRSGRRFTEDEVTALVDGAGFQVTAVHGIRVFADLVPGSLLDLEPGAAAALVDLERAVSERAEFR PLATQLHLLAR
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787151, Length=247, Percent_Identity=29.5546558704453, Blast_Score=92, Evalue=4e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 26173; Mature: 26042
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPDRPGERPSERPSERRTAARTSVVWDALLPALDGAALDVLDIGGGTGGFAVRVAELGH CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHEEEHHHHCC RVTVVDPSPDALASLDRRAREAGVTVAGRQGDLSTLLDVTGPDAADVVLCHGVLEVVDDP EEEEECCCCHHHHHHHHHHHHCCCEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCC GAALTTLRRVLRPGGTLSLLVGQRHAAVVARAMAGHFAQALAMLDQAPGGPARDHGGRSG CHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC RRFTEDEVTALVDGAGFQVTAVHGIRVFADLVPGSLLDLEPGAAAALVDLERAVSERAEF CCCCHHHHHHEECCCCEEEEEEHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHH RPLATQLHLLAR HHHHHHHHHHCC >Mature Secondary Structure PPDRPGERPSERPSERRTAARTSVVWDALLPALDGAALDVLDIGGGTGGFAVRVAELGH CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHEEEHHHHCC RVTVVDPSPDALASLDRRAREAGVTVAGRQGDLSTLLDVTGPDAADVVLCHGVLEVVDDP EEEEECCCCHHHHHHHHHHHHCCCEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCC GAALTTLRRVLRPGGTLSLLVGQRHAAVVARAMAGHFAQALAMLDQAPGGPARDHGGRSG CHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC RRFTEDEVTALVDGAGFQVTAVHGIRVFADLVPGSLLDLEPGAAAALVDLERAVSERAEF CCCCHHHHHHEECCCCEEEEEEHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHH RPLATQLHLLAR HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7513784; 8905232; 9278503; 8566713 [H]