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The map label for this gene is 119717227

Identifier: 119717227

GI number: 119717227

Start: 3198661

End: 3200469

Strand: Reverse

Name: 119717227

Synonym: Noca_3003

Alternate gene names: NA

Gene position: 3200469-3198661 (Counterclockwise)

Preceding gene: 119717228

Following gene: 119717225

Centisome position: 64.19

GC content: 73.91

Gene sequence:

>1809_bases
GTGCCGATCGAGGACCACGCCTTGCTCGGCGACACCCGCACGGCGGCGCTCGTCGACCCCGACGGCTCGATCGAGTGGCT
CTGCCTTCCGCGCTTCGACGGTGAGCCGGTCTTCGGCCGCCTCGTCGGCGGGGAGGCGGCAGGACACTTCAAGCTCGGTC
CGGCCGGACCGGCCGGACCGGTCACCCGCCGCTATCGGCCGAGCTCCAACACCCTCGAGACGACGTGGGAGACGGAGACC
GGGCGCCTCACCCTGACCGAAGGCATGGTGGCCGAGGTGCGGGGCCAGTTGCTGCCGGCCACGCTCCTGGTCCGTCGGCT
GTCGGCCGAGGGCGGGCCGGCGGCGGCCGTCCTCGAGTTCGACCCACGGCTCGGGAATGCGCACCGGCGGCCCCGGACCC
GGCGCCGAGGACAGCACCTGGTCTGCAGCTGGCCGGGTCTGGCGATCGCACTGACCGTGGACCCGGCCGCGCCGGTCGAG
CCCGGCCGCGCCCAGGCGTTGACCATCACCCCGGGTCACCCGCTGACCTGCGTGCTGACCGTCGCGGACCGGGAGCCCCT
GGTCCATCTCGACCCGATCACCGCGTGGAACGTCCTCGAGCGCGACGAGCTGCGCTGGCGGGACTGGTGTGCCGAGATCG
ATCCCGACCTGCCCCACCGTGACACCGTGGCGCGCAGCCTGCTGACCCTCCGGCTGCTCACCTACTCACCGTCCGGGGCG
CCGGTCGCAGCACCCACGACCTCCCTGCCGGAGAGCCTCGGTGGCGGCCGGAACTGGGACTACCGCTACTCCTGGCCGCG
CGACGCGAGCATCGGGGTCGCCGCGTTCCTGGGCGCGGGGAAACAGGCCGAGGCGCGTGCGTTCATGGCCTGGCTGCTCA
GCGCCACGCGACTGGACCGTCCGCGCCTGCCCGTCCTGCTGACCCTGCACGGCAAGCACCCGAGAGCCGAGCGTGAGCTG
ACGGAGTGGCCCGGCTATGCCGCGAGCACGCCCGTCCGCGTCGGGAACGCCGCATCCGGGCAGCACCAGCTCGACGGATA
CGGCTGGGTCCTCGACGCCGCCTGGCTGCTCTCCCGTTCCGGCCACCGCCTGTACAGCGAGACCTGGCGGGCGATGGCCG
GGTTCGCGGACCGGGTGGCCGAGCACTGGCGAGAGCCCGATGCCGGCATCTGGGAGATCCGCGCGGACTCCGCCCACCAC
GTGCACTCCAAGCTGATGGCGTGGCTCGCCCTGGACCGGGCCGTCCGCCTGGCCGAGCACCATCGCACGGCCGGCGGGCG
CCGGCGTCGATGGGCGGAGGAGCGAGCGGCGCTGCGCGCGGACATCACCCGGCACGGCTTCGACCCGGAGCGCGGCACGT
ACACGCGCAGCTACGGCTCGCGAGAGGTCGACGCGGCGGTCCTGGTCCTGCCCCAGCTCGGCTTCGAGCCGCCGGACTCG
CCGCGCATCCAGGGGACCATCGACGCGATCGCTCGCGAGCTGACTGCCGGTGGCCCGCTGCTCTTCCGCTACCCGCCCGG
TCACGACGGGCTCGAAGGCACCGAGGGCGCCTTCCTGCCGTGCTCCTTCTGGATGGTCCAGGCACTCGCGCACAGCGGCC
GGCTTCCCGAGGCCCGGGCGTTGCTGGACGAGCTGGTGGCGCTGGCCAGCCCGGTCGGCCTCTACGGCGAGGAGATGGAT
CCGGCGACCGGCCACCATCTCGGCAACTACCCGCAGGCACTGACGCACTCGGGCCTGGTCCAGGCGGCGCTCGCCGTGCG
GGACGCGGCGGCTAGGGCACGGGCTGCTCGACCGGCACCGACCTGGTGA

Upstream 100 bases:

>100_bases
CCCAGACCCCGCTGGTCACCCTCGCCGCGCACGTCGCGTACGGCATCGCGCTCGGTGCCCTCCTCGAGATCTCGTGAGCA
GGAACCGCACCCGGGAGCCC

Downstream 100 bases:

>100_bases
CGTGCAGGCTCACGGCCAGCAGTGCGGCCAGCAGCAGCGCGTCGACGGTGATCACCACCGTCAGCAGGCCGCGCAGCGTC
TCGGTCGTGAGGCCGAGGCC

Product: glycoside hydrolase 15-like protein

Products: NA

Alternate protein names: Glycosyl Hydrolase; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Glycoside Hydrolase Family; Glucoamylase; Trehalose-Phosphatase; Glycoside Hydrolase Family Protein; Trehalose-Phosphatase/Glycoside Hydrolase; Glucoamylase-Like Glycosyl Hydrolase; Trehalose Phosphatase; Glucoamylase Or Related Glycosyl Hydrolase; Six-Hairpin Glycosidase-Like Protein; Trehalose 6-Phosphatase; Trehalose-Phosphatase/ Glycoside Hydrolase; Glucoamylase Or Related Glycosyl Hydrolase Protein; HAD Family Hydrolase; Hydrolase; Glycosyl Hydrolase Glycosyl Hydrolase Family; Glycosyl Hydrolase Protein; Trehalose-6-Phosphate Phophatase

Number of amino acids: Translated: 602; Mature: 601

Protein sequence:

>602_residues
MPIEDHALLGDTRTAALVDPDGSIEWLCLPRFDGEPVFGRLVGGEAAGHFKLGPAGPAGPVTRRYRPSSNTLETTWETET
GRLTLTEGMVAEVRGQLLPATLLVRRLSAEGGPAAAVLEFDPRLGNAHRRPRTRRRGQHLVCSWPGLAIALTVDPAAPVE
PGRAQALTITPGHPLTCVLTVADREPLVHLDPITAWNVLERDELRWRDWCAEIDPDLPHRDTVARSLLTLRLLTYSPSGA
PVAAPTTSLPESLGGGRNWDYRYSWPRDASIGVAAFLGAGKQAEARAFMAWLLSATRLDRPRLPVLLTLHGKHPRAEREL
TEWPGYAASTPVRVGNAASGQHQLDGYGWVLDAAWLLSRSGHRLYSETWRAMAGFADRVAEHWREPDAGIWEIRADSAHH
VHSKLMAWLALDRAVRLAEHHRTAGGRRRRWAEERAALRADITRHGFDPERGTYTRSYGSREVDAAVLVLPQLGFEPPDS
PRIQGTIDAIARELTAGGPLLFRYPPGHDGLEGTEGAFLPCSFWMVQALAHSGRLPEARALLDELVALASPVGLYGEEMD
PATGHHLGNYPQALTHSGLVQAALAVRDAAARARAARPAPTW

Sequences:

>Translated_602_residues
MPIEDHALLGDTRTAALVDPDGSIEWLCLPRFDGEPVFGRLVGGEAAGHFKLGPAGPAGPVTRRYRPSSNTLETTWETET
GRLTLTEGMVAEVRGQLLPATLLVRRLSAEGGPAAAVLEFDPRLGNAHRRPRTRRRGQHLVCSWPGLAIALTVDPAAPVE
PGRAQALTITPGHPLTCVLTVADREPLVHLDPITAWNVLERDELRWRDWCAEIDPDLPHRDTVARSLLTLRLLTYSPSGA
PVAAPTTSLPESLGGGRNWDYRYSWPRDASIGVAAFLGAGKQAEARAFMAWLLSATRLDRPRLPVLLTLHGKHPRAEREL
TEWPGYAASTPVRVGNAASGQHQLDGYGWVLDAAWLLSRSGHRLYSETWRAMAGFADRVAEHWREPDAGIWEIRADSAHH
VHSKLMAWLALDRAVRLAEHHRTAGGRRRRWAEERAALRADITRHGFDPERGTYTRSYGSREVDAAVLVLPQLGFEPPDS
PRIQGTIDAIARELTAGGPLLFRYPPGHDGLEGTEGAFLPCSFWMVQALAHSGRLPEARALLDELVALASPVGLYGEEMD
PATGHHLGNYPQALTHSGLVQAALAVRDAAARARAARPAPTW
>Mature_601_residues
PIEDHALLGDTRTAALVDPDGSIEWLCLPRFDGEPVFGRLVGGEAAGHFKLGPAGPAGPVTRRYRPSSNTLETTWETETG
RLTLTEGMVAEVRGQLLPATLLVRRLSAEGGPAAAVLEFDPRLGNAHRRPRTRRRGQHLVCSWPGLAIALTVDPAAPVEP
GRAQALTITPGHPLTCVLTVADREPLVHLDPITAWNVLERDELRWRDWCAEIDPDLPHRDTVARSLLTLRLLTYSPSGAP
VAAPTTSLPESLGGGRNWDYRYSWPRDASIGVAAFLGAGKQAEARAFMAWLLSATRLDRPRLPVLLTLHGKHPRAERELT
EWPGYAASTPVRVGNAASGQHQLDGYGWVLDAAWLLSRSGHRLYSETWRAMAGFADRVAEHWREPDAGIWEIRADSAHHV
HSKLMAWLALDRAVRLAEHHRTAGGRRRRWAEERAALRADITRHGFDPERGTYTRSYGSREVDAAVLVLPQLGFEPPDSP
RIQGTIDAIARELTAGGPLLFRYPPGHDGLEGTEGAFLPCSFWMVQALAHSGRLPEARALLDELVALASPVGLYGEEMDP
ATGHHLGNYPQALTHSGLVQAALAVRDAAARARAARPAPTW

Specific function: Unknown

COG id: COG3387

COG function: function code G; Glucoamylase and related glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65800; Mature: 65669

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIEDHALLGDTRTAALVDPDGSIEWLCLPRFDGEPVFGRLVGGEAAGHFKLGPAGPAGP
CCCCCCEEECCCCEEEEECCCCCEEEEEEECCCCCCCEEEEECCCCCCCEECCCCCCCCC
VTRRYRPSSNTLETTWETETGRLTLTEGMVAEVRGQLLPATLLVRRLSAEGGPAAAVLEF
CCCCCCCCCCCEEEEEECCCCEEEECCCHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEE
DPRLGNAHRRPRTRRRGQHLVCSWPGLAIALTVDPAAPVEPGRAQALTITPGHPLTCVLT
CCCCCCCCCCCHHHHCCCEEEEECCCEEEEEEECCCCCCCCCCCEEEEECCCCCEEEEEE
VADREPLVHLDPITAWNVLERDELRWRDWCAEIDPDLPHRDTVARSLLTLRLLTYSPSGA
EECCCCEEEECCCCHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEECCCCC
PVAAPTTSLPESLGGGRNWDYRYSWPRDASIGVAAFLGAGKQAEARAFMAWLLSATRLDR
CCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCC
PRLPVLLTLHGKHPRAERELTEWPGYAASTPVRVGNAASGQHQLDGYGWVLDAAWLLSRS
CCCCEEEEECCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCC
GHRLYSETWRAMAGFADRVAEHWREPDAGIWEIRADSAHHVHSKLMAWLALDRAVRLAEH
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
HRTAGGRRRRWAEERAALRADITRHGFDPERGTYTRSYGSREVDAAVLVLPQLGFEPPDS
HHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCEEEEEEECCCCCCCCC
PRIQGTIDAIARELTAGGPLLFRYPPGHDGLEGTEGAFLPCSFWMVQALAHSGRLPEARA
CCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHH
LLDELVALASPVGLYGEEMDPATGHHLGNYPQALTHSGLVQAALAVRDAAARARAARPAP
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TW
CC
>Mature Secondary Structure 
PIEDHALLGDTRTAALVDPDGSIEWLCLPRFDGEPVFGRLVGGEAAGHFKLGPAGPAGP
CCCCCEEECCCCEEEEECCCCCEEEEEEECCCCCCCEEEEECCCCCCCEECCCCCCCCC
VTRRYRPSSNTLETTWETETGRLTLTEGMVAEVRGQLLPATLLVRRLSAEGGPAAAVLEF
CCCCCCCCCCCEEEEEECCCCEEEECCCHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEE
DPRLGNAHRRPRTRRRGQHLVCSWPGLAIALTVDPAAPVEPGRAQALTITPGHPLTCVLT
CCCCCCCCCCCHHHHCCCEEEEECCCEEEEEEECCCCCCCCCCCEEEEECCCCCEEEEEE
VADREPLVHLDPITAWNVLERDELRWRDWCAEIDPDLPHRDTVARSLLTLRLLTYSPSGA
EECCCCEEEECCCCHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEECCCCC
PVAAPTTSLPESLGGGRNWDYRYSWPRDASIGVAAFLGAGKQAEARAFMAWLLSATRLDR
CCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCC
PRLPVLLTLHGKHPRAERELTEWPGYAASTPVRVGNAASGQHQLDGYGWVLDAAWLLSRS
CCCCEEEEECCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCC
GHRLYSETWRAMAGFADRVAEHWREPDAGIWEIRADSAHHVHSKLMAWLALDRAVRLAEH
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
HRTAGGRRRRWAEERAALRADITRHGFDPERGTYTRSYGSREVDAAVLVLPQLGFEPPDS
HHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCEEEEEEECCCCCCCCC
PRIQGTIDAIARELTAGGPLLFRYPPGHDGLEGTEGAFLPCSFWMVQALAHSGRLPEARA
CCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHH
LLDELVALASPVGLYGEEMDPATGHHLGNYPQALTHSGLVQAALAVRDAAARARAARPAP
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TW
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA