Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119717223
Identifier: 119717223
GI number: 119717223
Start: 3193539
End: 3194279
Strand: Reverse
Name: 119717223
Synonym: Noca_2999
Alternate gene names: NA
Gene position: 3194279-3193539 (Counterclockwise)
Preceding gene: 119717225
Following gene: 119717222
Centisome position: 64.07
GC content: 72.33
Gene sequence:
>741_bases ATGCCGTGGCAGCCCGATCTCAGCCGGTCGGTGCGGCTGTTCCGGGACTTCCGCGTCGAGCAGAGCGATCCGAGGCGCTT CTACACCGCGCTCGCGCAGGACTCGGTCGGCCAGATCTCGGCGTACCTCGCGCCGGACGGCCGCGGCCTGGCCGGCGCGA CGCTCCTCGACGTCGGGGGCGGCCCCGGCTACTTCCGTGACGCGTTCCGGGCCGCCGGGGCGACGTACTGGGCGCTGGAT GCCGACGTCGGGGAGCTGGCCGGGCTGGGTGGCATCGCCGCCGGTACGGTCGTCGGCGACGGCATGAACCTGCCGTTCCG CGACGGCTCGGTCGACGTGTGCTACTCCTCGAACGTGCTCGAGCACGTGTCACGGCCCTGGGACCTGGCCGACGAGATGC TCCGGGTCACCCGGCCCGGCGGGATCGCCTTCATCTCCTACACGCTGTGGTGGGGTCCGTGGGGCGGGCACGAGACCTCG CCCTGGCACTACCTCGGCGGCGACCGCGCGCGGCGCCGCTACCGTCGACGGCACGGTCGCGAGCCCAAGAACAGGTACGG CGAGTCGCTGTTCCCCGTCACCGTGCGCGCCGGGGTGGACTGGGCGCGGCGCCAGCAGGCCGGCGACGTGCTCGCGGTGA TCCCTCGCTACAACCCTCGGTGGAGCTACTGGATGTCTCGGGTTCCGGTCCTCCGAGAGGTGGTGACGTGGAACCTCGCC CTGGTGCTGAGGAAGCGCTGA
Upstream 100 bases:
>100_bases GGGTGTCCCGCCAGCTGAAGAACGCCACGTGGCGTCCGGCAAGCTCGTCGGTCATCGGCACGGGGCGAGGTTACCCGCTG GTTCGGATAGGGTTCCGCGC
Downstream 100 bases:
>100_bases CCACACCGGCTCCGATCAGCGCGGTGGCGCGGTTCCGACTCCGCCTGGCCGGGGCCTGCGCACTGCTGGTCGGTCTCGCG CTCGTGCAGTCGCCCGGGCT
Product: type 11 methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MPWQPDLSRSVRLFRDFRVEQSDPRRFYTALAQDSVGQISAYLAPDGRGLAGATLLDVGGGPGYFRDAFRAAGATYWALD ADVGELAGLGGIAAGTVVGDGMNLPFRDGSVDVCYSSNVLEHVSRPWDLADEMLRVTRPGGIAFISYTLWWGPWGGHETS PWHYLGGDRARRRYRRRHGREPKNRYGESLFPVTVRAGVDWARRQQAGDVLAVIPRYNPRWSYWMSRVPVLREVVTWNLA LVLRKR
Sequences:
>Translated_246_residues MPWQPDLSRSVRLFRDFRVEQSDPRRFYTALAQDSVGQISAYLAPDGRGLAGATLLDVGGGPGYFRDAFRAAGATYWALD ADVGELAGLGGIAAGTVVGDGMNLPFRDGSVDVCYSSNVLEHVSRPWDLADEMLRVTRPGGIAFISYTLWWGPWGGHETS PWHYLGGDRARRRYRRRHGREPKNRYGESLFPVTVRAGVDWARRQQAGDVLAVIPRYNPRWSYWMSRVPVLREVVTWNLA LVLRKR >Mature_245_residues PWQPDLSRSVRLFRDFRVEQSDPRRFYTALAQDSVGQISAYLAPDGRGLAGATLLDVGGGPGYFRDAFRAAGATYWALDA DVGELAGLGGIAAGTVVGDGMNLPFRDGSVDVCYSSNVLEHVSRPWDLADEMLRVTRPGGIAFISYTLWWGPWGGHETSP WHYLGGDRARRRYRRRHGREPKNRYGESLFPVTVRAGVDWARRQQAGDVLAVIPRYNPRWSYWMSRVPVLREVVTWNLAL VLRKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 27697; Mature: 27565
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWQPDLSRSVRLFRDFRVEQSDPRRFYTALAQDSVGQISAYLAPDGRGLAGATLLDVGG CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHEEEEECCCCCCCCCEEEEECCC GPGYFRDAFRAAGATYWALDADVGELAGLGGIAAGTVVGDGMNLPFRDGSVDVCYSSNVL CCHHHHHHHHHCCCEEEEEECCHHHHHCCCCHHEEEEECCCCCCCCCCCCEEEEECCHHH EHVSRPWDLADEMLRVTRPGGIAFISYTLWWGPWGGHETSPWHYLGGDRARRRYRRRHGR HHHCCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCEECCCHHHHHHHHHHHCC EPKNRYGESLFPVTVRAGVDWARRQQAGDVLAVIPRYNPRWSYWMSRVPVLREVVTWNLA CHHHHHCCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHE LVLRKR EEEECC >Mature Secondary Structure PWQPDLSRSVRLFRDFRVEQSDPRRFYTALAQDSVGQISAYLAPDGRGLAGATLLDVGG CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHEEEEECCCCCCCCCEEEEECCC GPGYFRDAFRAAGATYWALDADVGELAGLGGIAAGTVVGDGMNLPFRDGSVDVCYSSNVL CCHHHHHHHHHCCCEEEEEECCHHHHHCCCCHHEEEEECCCCCCCCCCCCEEEEECCHHH EHVSRPWDLADEMLRVTRPGGIAFISYTLWWGPWGGHETSPWHYLGGDRARRRYRRRHGR HHHCCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCEECCCHHHHHHHHHHHCC EPKNRYGESLFPVTVRAGVDWARRQQAGDVLAVIPRYNPRWSYWMSRVPVLREVVTWNLA CHHHHHCCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHE LVLRKR EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA