Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119717215
Identifier: 119717215
GI number: 119717215
Start: 3181587
End: 3182549
Strand: Reverse
Name: 119717215
Synonym: Noca_2991
Alternate gene names: NA
Gene position: 3182549-3181587 (Counterclockwise)
Preceding gene: 119717217
Following gene: 119717213
Centisome position: 63.83
GC content: 67.71
Gene sequence:
>963_bases GTGCACCGGATCGCATCATCCTTGGGAGGGGACGTGAAGCGTAAGTGGCTCGGCAGGGTGCTCCTTGCCGTGGGCGCCTT CCTGCTCGTGGCCGGGGTGCTCGCCACGGTCTGGGCGCCCGGCGTCGTCAAGAAGACGCCCCTGGACGTCAACCAGGTGA CCCACCTGTCGGGCACGGTGCAGAAGCTCGATCCGCTCACCGGTGACTTCGAGGAGAAGCCGGTCAAGGTCCAGAGCATC ACCAAGACCGACTCCGAGCACTCCGACGGCGACATCGTCAGCTGGGTCCAGACCACCTGTGTGGTCATCGACGTCAACGA CGCACCCGACTGTGTCGACGGCGACGACGAGCGCCTGGTGTCCGCGAGCACCGACGTGTTCGCCACCGACCGGGTGACCG CGCTGGCCGTCAACGACAGCGACTACCTCCCCGCCGACGCCACGCCGCACGACGGCGTGATGAACAAGTGGCCCTTCGAT GCGGAGAAGACCACCTACCCGTTCTGGGACGGCACCGCCGGCCACGCCATCGACGCCGTCTACGACCGCACCGAGACGCT CGACGGCATCGAGTGCTACGTCTACAAGGCCTCCGTCACCGACGCCCCGATCCAGATCGCCGAGGGCATCGACGGCACCT ACGACAACAACGTCGAGATCTGGGTCGAGCCCAAGACCGGTGCGATCCAGCAGCAGACCCAGGACCAGCAGCGCTACCTG ACCGACGGCACCCAGGTCCTCGACCTGAAGATCGGCTTCACCGAGGACCAGATCAAGGCGTTCGCCGACGACGCGAGGAC GAACATGCGGACGCTGGCCATCCTCCTCGTCTGGCTGCCGGTCGTCGGGTTCGCGGGCGGTGCGCTGTGCGTGCTCGCCG GGCTGGCGTTGCTGCTCACCGCTCGCCGTGCGGCCACCGGTGGCACGACCGCGAGGCGCGAGATGGCGAACGCCGCGAGC TGA
Upstream 100 bases:
>100_bases GGCCGTCGGTCATGGCAGAGGACACTAGCCGCACCCCTCGGGCAACAAATCGGGGCCGAGTGTGACGGACGCCGCATTTC TACCCGCGGGTACTGCTACG
Downstream 100 bases:
>100_bases GCTCGTCTCCCGCGACCATCGGGTCGGGCTCAGCCGAGCCGGGCCCCGAAGATCGCGGTGCCCGGGGTGTACCGGCCCCG GGTCCGTGACCAGCCACCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MHRIASSLGGDVKRKWLGRVLLAVGAFLLVAGVLATVWAPGVVKKTPLDVNQVTHLSGTVQKLDPLTGDFEEKPVKVQSI TKTDSEHSDGDIVSWVQTTCVVIDVNDAPDCVDGDDERLVSASTDVFATDRVTALAVNDSDYLPADATPHDGVMNKWPFD AEKTTYPFWDGTAGHAIDAVYDRTETLDGIECYVYKASVTDAPIQIAEGIDGTYDNNVEIWVEPKTGAIQQQTQDQQRYL TDGTQVLDLKIGFTEDQIKAFADDARTNMRTLAILLVWLPVVGFAGGALCVLAGLALLLTARRAATGGTTARREMANAAS
Sequences:
>Translated_320_residues MHRIASSLGGDVKRKWLGRVLLAVGAFLLVAGVLATVWAPGVVKKTPLDVNQVTHLSGTVQKLDPLTGDFEEKPVKVQSI TKTDSEHSDGDIVSWVQTTCVVIDVNDAPDCVDGDDERLVSASTDVFATDRVTALAVNDSDYLPADATPHDGVMNKWPFD AEKTTYPFWDGTAGHAIDAVYDRTETLDGIECYVYKASVTDAPIQIAEGIDGTYDNNVEIWVEPKTGAIQQQTQDQQRYL TDGTQVLDLKIGFTEDQIKAFADDARTNMRTLAILLVWLPVVGFAGGALCVLAGLALLLTARRAATGGTTARREMANAAS >Mature_320_residues MHRIASSLGGDVKRKWLGRVLLAVGAFLLVAGVLATVWAPGVVKKTPLDVNQVTHLSGTVQKLDPLTGDFEEKPVKVQSI TKTDSEHSDGDIVSWVQTTCVVIDVNDAPDCVDGDDERLVSASTDVFATDRVTALAVNDSDYLPADATPHDGVMNKWPFD AEKTTYPFWDGTAGHAIDAVYDRTETLDGIECYVYKASVTDAPIQIAEGIDGTYDNNVEIWVEPKTGAIQQQTQDQQRYL TDGTQVLDLKIGFTEDQIKAFADDARTNMRTLAILLVWLPVVGFAGGALCVLAGLALLLTARRAATGGTTARREMANAAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34468; Mature: 34468
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRIASSLGGDVKRKWLGRVLLAVGAFLLVAGVLATVWAPGVVKKTPLDVNQVTHLSGTV CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHH QKLDPLTGDFEEKPVKVQSITKTDSEHSDGDIVSWVQTTCVVIDVNDAPDCVDGDDERLV HHHCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHEEEEEEEEEECCCCCCCCCCCCHHEE SASTDVFATDRVTALAVNDSDYLPADATPHDGVMNKWPFDAEKTTYPFWDGTAGHAIDAV ECCCCEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH YDRTETLDGIECYVYKASVTDAPIQIAEGIDGTYDNNVEIWVEPKTGAIQQQTQDQQRYL HHHHCCCCCEEEEEEEECCCCCCHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHH TDGTQVLDLKIGFTEDQIKAFADDARTNMRTLAILLVWLPVVGFAGGALCVLAGLALLLT CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH ARRAATGGTTARREMANAAS HHHHCCCCCHHHHHHHHCCC >Mature Secondary Structure MHRIASSLGGDVKRKWLGRVLLAVGAFLLVAGVLATVWAPGVVKKTPLDVNQVTHLSGTV CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHH QKLDPLTGDFEEKPVKVQSITKTDSEHSDGDIVSWVQTTCVVIDVNDAPDCVDGDDERLV HHHCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHEEEEEEEEEECCCCCCCCCCCCHHEE SASTDVFATDRVTALAVNDSDYLPADATPHDGVMNKWPFDAEKTTYPFWDGTAGHAIDAV ECCCCEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH YDRTETLDGIECYVYKASVTDAPIQIAEGIDGTYDNNVEIWVEPKTGAIQQQTQDQQRYL HHHHCCCCCEEEEEEEECCCCCCHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHH TDGTQVLDLKIGFTEDQIKAFADDARTNMRTLAILLVWLPVVGFAGGALCVLAGLALLLT CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH ARRAATGGTTARREMANAAS HHHHCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA