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The map label for this gene is ydaO [H]

Identifier: 119717126

GI number: 119717126

Start: 3085514

End: 3087571

Strand: Reverse

Name: ydaO [H]

Synonym: Noca_2902

Alternate gene names: 119717126

Gene position: 3087571-3085514 (Counterclockwise)

Preceding gene: 119717129

Following gene: 119717125

Centisome position: 61.93

GC content: 69.87

Gene sequence:

>2058_bases
TTGCCGGTCGTGAGTGTCGGCGACGTATCGAAGCGGATCCTGCTGGGGCGCAAGCTGCGCAGCTCCCAGCTGGGGGAGAC
GCTCCTCCCCAAGCGGATCGCGCTACCAGTGTTCGCCAGCGACGCGCTGTCCTCGGTGGCCTACGCCCCGGACGAGGTCT
TCATCATGCTGTCGCTGGCGGGCGCGTCGGCGTACGTCTGGTCGTGGAAGATCGGCATCGCGGTCGCGCTGGTGATGGCG
GCCGTGGTCGCGTCGTACCGGCAGACCGTGCACGCCTACCCCAGCGGCGGCGGCGACTACGAGGTCGCGACGGTCAACCT
GGGCCCGACCGCCGGCACCACCGTGGCCAGCGCGCTGTTGGTCGACTACGTGCTCACGGTCGCGGTGTCGATCTCCTCGG
GGGCCCAGTACGCCGCGTCCGCCATCGACGCGCTCAGCGGCCACGAGGCCACCTTCGCGACCGCGATGGTGGTCCTGCTG
ATGGCGATCAACCTGCGCGGGATCCGGGAGTCGGGCACGTTCTTCGCGATCCCGACCTACGCGTTCATGGTCGCGATCCT
CGGGATGTGCGGCTACGGGCTGCTCGAGCTGGCCGAGGGGCGGCTGCCGCAGGCGGCGAGCGCCGACCTGGACATGACCT
CCGCGCCCGGCTACGGCGACTCGATGACGACCTTCGCGCTGCTGTTCCTCCTGGCGCGGGCCTTCTCCTCCGGCTGTGCG
GCGCTGACCGGCGTCGAGGCGATCTCGAACGGCGTGCCGGCGTTCCGCAGGCCGAAGAGCAGGAATGCGGCGACCACGCT
GTTCCTGCTCGGCGCGATCGCGATCACGATGATGATCAGCGTCATCGTGCTCGCCAAGCAGATGGGCCTCCAGCTGGTCG
ACCCGAGCGACGTGGACCGGCTCACCCGCAACGGCGAGCCGCTGCCGGCCGGCTACGACCAGCACACGGTGATCGCCCAG
ATCGCGGACGCCGTGTTCCACGACTTCCCGGCCGGCTTCTACCTGGTCGTGACCGTCACCGGCGTGATCCTGGTGCTGGC
CGCGAACACCGCGTTCAACGGCTTCCCGGTGCTCGGGTCGATCCTGGCCAAGGACGGGTACGCCCCGCGGGCCCTCGGCG
CCCGCGGCGACCGGCTCGCCTACAGCAACGGCATCGTGTTCCTCGCCGTGATGGCGATCGCCCTGATCCAGGTGTTCAAC
GCCGAGACGACCCGGCTGATCCAGCTCTACATCGTCGGGGTGTTCGTCTCGTTCAACCTCAGCCAGCTCGGGATGATCCG
GCACTGGACCAGGCACCTGCAGACCGAGCGGGACCCGGCGGTCCGCCGGCGGATGGTCCGCTCACGGACCATCAACGCCA
TCGGGCTCACCTTCACCGCGGTCGTGCTGGTGGTCGTCCTGATCACCAAGTTCCTCGCCGGGGCGTGGATCACGATCCTC
GCGATGCTGTTCTTCTTCGCGGGGATGCGCGCGATCCGGCGCCACTACGACAGCGTCAACGACGAGCTGGCCGCCGACGA
GGAGGACAAGGTCCTCCCGACCCGGGTGCACGCGATCGTGCTGGTCTCCAAGCTGCACAAGCCGACCCTGCGCGCGCTCG
CGTTCGCCAAGGCGACCCGGCCCAACGTGCTCGAGGGCGTCTACGTCTCGGTCGACCAGGCGGCCACCAACCGGCTGCTC
GAGGAGTGGGACGAGCGCAACCTCGGCGTACCCCTCAAGGTCCTGCACTCGCCCTACCGCGAGCTGGTCCGGCCGATCGT
CGAGTACGCCACCGAGATCCGCAGGGCGAACCCGCGCGGCGTGGTCGCGGTCTACATCCCGGAGTACGTCGTGGGCCGCT
GGTGGGAGCAGCTGCTGCACAACCAGACGGCGCTGCGGCTCAAGGGCCGGCTGCTCTTCGCGCCCGGCGTCATGGTCACC
TCGGTGCCCTACCAGCTGCGCTCCTCGGAGCTGGCCCGGGAGCGGGAGGAGCGGATCGGCGTCTGGACCCGGCCCACCGA
CTACCGGCTGGGTGACCCGCGGTCGCGGCACGACTCGGACCGGCAGATCCAGCCGTGA

Upstream 100 bases:

>100_bases
TCCTCGAGACTGCGGGCCAGCGTCGAGCCGACCCGCCCGCAGCCCATGATCACGACGTGCACGTCGCAGACGCTACAGGA
GCGGTGCGGAGGGTCTAGCC

Downstream 100 bases:

>100_bases
CCCGGCAGCCGCGACCGCGCAGGGCTCGCGGCGGCTCCCGCGTCGGCGAGCGGTTCGAGGCCGTGGTCGGCCCGATCGCG
CATGGCGGGCACTGCATCGT

Product: putative transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 685; Mature: 684

Protein sequence:

>685_residues
MPVVSVGDVSKRILLGRKLRSSQLGETLLPKRIALPVFASDALSSVAYAPDEVFIMLSLAGASAYVWSWKIGIAVALVMA
AVVASYRQTVHAYPSGGGDYEVATVNLGPTAGTTVASALLVDYVLTVAVSISSGAQYAASAIDALSGHEATFATAMVVLL
MAINLRGIRESGTFFAIPTYAFMVAILGMCGYGLLELAEGRLPQAASADLDMTSAPGYGDSMTTFALLFLLARAFSSGCA
ALTGVEAISNGVPAFRRPKSRNAATTLFLLGAIAITMMISVIVLAKQMGLQLVDPSDVDRLTRNGEPLPAGYDQHTVIAQ
IADAVFHDFPAGFYLVVTVTGVILVLAANTAFNGFPVLGSILAKDGYAPRALGARGDRLAYSNGIVFLAVMAIALIQVFN
AETTRLIQLYIVGVFVSFNLSQLGMIRHWTRHLQTERDPAVRRRMVRSRTINAIGLTFTAVVLVVVLITKFLAGAWITIL
AMLFFFAGMRAIRRHYDSVNDELAADEEDKVLPTRVHAIVLVSKLHKPTLRALAFAKATRPNVLEGVYVSVDQAATNRLL
EEWDERNLGVPLKVLHSPYRELVRPIVEYATEIRRANPRGVVAVYIPEYVVGRWWEQLLHNQTALRLKGRLLFAPGVMVT
SVPYQLRSSELAREREERIGVWTRPTDYRLGDPRSRHDSDRQIQP

Sequences:

>Translated_685_residues
MPVVSVGDVSKRILLGRKLRSSQLGETLLPKRIALPVFASDALSSVAYAPDEVFIMLSLAGASAYVWSWKIGIAVALVMA
AVVASYRQTVHAYPSGGGDYEVATVNLGPTAGTTVASALLVDYVLTVAVSISSGAQYAASAIDALSGHEATFATAMVVLL
MAINLRGIRESGTFFAIPTYAFMVAILGMCGYGLLELAEGRLPQAASADLDMTSAPGYGDSMTTFALLFLLARAFSSGCA
ALTGVEAISNGVPAFRRPKSRNAATTLFLLGAIAITMMISVIVLAKQMGLQLVDPSDVDRLTRNGEPLPAGYDQHTVIAQ
IADAVFHDFPAGFYLVVTVTGVILVLAANTAFNGFPVLGSILAKDGYAPRALGARGDRLAYSNGIVFLAVMAIALIQVFN
AETTRLIQLYIVGVFVSFNLSQLGMIRHWTRHLQTERDPAVRRRMVRSRTINAIGLTFTAVVLVVVLITKFLAGAWITIL
AMLFFFAGMRAIRRHYDSVNDELAADEEDKVLPTRVHAIVLVSKLHKPTLRALAFAKATRPNVLEGVYVSVDQAATNRLL
EEWDERNLGVPLKVLHSPYRELVRPIVEYATEIRRANPRGVVAVYIPEYVVGRWWEQLLHNQTALRLKGRLLFAPGVMVT
SVPYQLRSSELAREREERIGVWTRPTDYRLGDPRSRHDSDRQIQP
>Mature_684_residues
PVVSVGDVSKRILLGRKLRSSQLGETLLPKRIALPVFASDALSSVAYAPDEVFIMLSLAGASAYVWSWKIGIAVALVMAA
VVASYRQTVHAYPSGGGDYEVATVNLGPTAGTTVASALLVDYVLTVAVSISSGAQYAASAIDALSGHEATFATAMVVLLM
AINLRGIRESGTFFAIPTYAFMVAILGMCGYGLLELAEGRLPQAASADLDMTSAPGYGDSMTTFALLFLLARAFSSGCAA
LTGVEAISNGVPAFRRPKSRNAATTLFLLGAIAITMMISVIVLAKQMGLQLVDPSDVDRLTRNGEPLPAGYDQHTVIAQI
ADAVFHDFPAGFYLVVTVTGVILVLAANTAFNGFPVLGSILAKDGYAPRALGARGDRLAYSNGIVFLAVMAIALIQVFNA
ETTRLIQLYIVGVFVSFNLSQLGMIRHWTRHLQTERDPAVRRRMVRSRTINAIGLTFTAVVLVVVLITKFLAGAWITILA
MLFFFAGMRAIRRHYDSVNDELAADEEDKVLPTRVHAIVLVSKLHKPTLRALAFAKATRPNVLEGVYVSVDQAATNRLLE
EWDERNLGVPLKVLHSPYRELVRPIVEYATEIRRANPRGVVAVYIPEYVVGRWWEQLLHNQTALRLKGRLLFAPGVMVTS
VPYQLRSSELAREREERIGVWTRPTDYRLGDPRSRHDSDRQIQP

Specific function: Probable Amino-Acid Or Metabolite Transport Protein. [C]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74461; Mature: 74329

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVVSVGDVSKRILLGRKLRSSQLGETLLPKRIALPVFASDALSSVAYAPDEVFIMLSLA
CCCCCCCHHHHHHHHHHHHHHHHCCHHHCCHHHCCCHHHHHHHHHHHCCCCCEEEEEEEC
GASAYVWSWKIGIAVALVMAAVVASYRQTVHAYPSGGGDYEVATVNLGPTAGTTVASALL
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHH
VDYVLTVAVSISSGAQYAASAIDALSGHEATFATAMVVLLMAINLRGIRESGTFFAIPTY
HHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHH
AFMVAILGMCGYGLLELAEGRLPQAASADLDMTSAPGYGDSMTTFALLFLLARAFSSGCA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHH
ALTGVEAISNGVPAFRRPKSRNAATTLFLLGAIAITMMISVIVLAKQMGLQLVDPSDVDR
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCHHHH
LTRNGEPLPAGYDQHTVIAQIADAVFHDFPAGFYLVVTVTGVILVLAANTAFNGFPVLGS
HHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHH
ILAKDGYAPRALGARGDRLAYSNGIVFLAVMAIALIQVFNAETTRLIQLYIVGVFVSFNL
HHHCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCH
SQLGMIRHWTRHLQTERDPAVRRRMVRSRTINAIGLTFTAVVLVVVLITKFLAGAWITIL
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMLFFFAGMRAIRRHYDSVNDELAADEEDKVLPTRVHAIVLVSKLHKPTLRALAFAKATR
HHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCC
PNVLEGVYVSVDQAATNRLLEEWDERNLGVPLKVLHSPYRELVRPIVEYATEIRRANPRG
CCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VVAVYIPEYVVGRWWEQLLHNQTALRLKGRLLFAPGVMVTSVPYQLRSSELAREREERIG
EEEEECCHHHHHHHHHHHHCCCCEEEECCEEEEECCHHEECCCHHHHHHHHHHHHHHHCC
VWTRPTDYRLGDPRSRHDSDRQIQP
CCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PVVSVGDVSKRILLGRKLRSSQLGETLLPKRIALPVFASDALSSVAYAPDEVFIMLSLA
CCCCCCHHHHHHHHHHHHHHHHCCHHHCCHHHCCCHHHHHHHHHHHCCCCCEEEEEEEC
GASAYVWSWKIGIAVALVMAAVVASYRQTVHAYPSGGGDYEVATVNLGPTAGTTVASALL
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHH
VDYVLTVAVSISSGAQYAASAIDALSGHEATFATAMVVLLMAINLRGIRESGTFFAIPTY
HHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHH
AFMVAILGMCGYGLLELAEGRLPQAASADLDMTSAPGYGDSMTTFALLFLLARAFSSGCA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHH
ALTGVEAISNGVPAFRRPKSRNAATTLFLLGAIAITMMISVIVLAKQMGLQLVDPSDVDR
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCHHHH
LTRNGEPLPAGYDQHTVIAQIADAVFHDFPAGFYLVVTVTGVILVLAANTAFNGFPVLGS
HHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHH
ILAKDGYAPRALGARGDRLAYSNGIVFLAVMAIALIQVFNAETTRLIQLYIVGVFVSFNL
HHHCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCH
SQLGMIRHWTRHLQTERDPAVRRRMVRSRTINAIGLTFTAVVLVVVLITKFLAGAWITIL
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMLFFFAGMRAIRRHYDSVNDELAADEEDKVLPTRVHAIVLVSKLHKPTLRALAFAKATR
HHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCC
PNVLEGVYVSVDQAATNRLLEEWDERNLGVPLKVLHSPYRELVRPIVEYATEIRRANPRG
CCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VVAVYIPEYVVGRWWEQLLHNQTALRLKGRLLFAPGVMVTSVPYQLRSSELAREREERIG
EEEEECCHHHHHHHHHHHHCCCCEEEECCEEEEECCHHEECCCHHHHHHHHHHHHHHHCC
VWTRPTDYRLGDPRSRHDSDRQIQP
CCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]