Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119717118
Identifier: 119717118
GI number: 119717118
Start: 3077972
End: 3078820
Strand: Reverse
Name: 119717118
Synonym: Noca_2894
Alternate gene names: NA
Gene position: 3078820-3077972 (Counterclockwise)
Preceding gene: 119717121
Following gene: 119717117
Centisome position: 61.75
GC content: 71.61
Gene sequence:
>849_bases ATGGTGACCGCCAACCGCGAGCGCAGCGACCGATGCCCGGGCGCGCTGCGGCCATGGGCTGCTGACGATGGCCTGCTGGT GCGCCTGCGCCTGATCGGGGGACGGGTCTCCGCGACCAGTCTGCGTTCCCTGATGTCGGTTGCCGAGGAGTACGGCGACG GTCGGATCCACCTGACGTCTCGGACCAACCTGCAGATCCGTGCGCTGCCCTCGCGTGACGGCCGACTTCCCGACGAGGTC CTGGCGGCGGTCGAGGCCACGGGACTGCTGCCCAGCCGGGCACACGACCTGGTCCGCAACGTGATGGTCTCGCCGCAGAC AGGATTGGCCGGGGGGCGGGCGGACCTACGTTCGGTCGCTGCTGCGCTCGATGCGGCGCTGCTGGCGGAGCCGACCCTGG GGGAGCTGCCCGGCAGGTTCCTCTTCGTGCTCGACGACGGCAGGGGAGACCTCCTCGATCGACGCTGCGACCTCGGTCTG GTCGCGGCCGATGCCGCAACTTGCCAACTGCGGATCGGGGACGGCCACGGCCCACTCGTCGCGCTCGATCATGCTGCCGG GGAGCTTGCGGAGCTCGGGCTCCGGTTCCTGAGCAGGCGGGGGAGCGGACCGACGGCGGCATGGCATGTCCGTGAGCTCC CGTCCGAGCTCGCGGCGGCGTCGGCACCCGATCCACGACTTCCGCGATCCGTCGGCCCGCTGGCGTACGGCGAGGTGCCC GGCGGCCACCACCTGGAGGTGCCCGAGGGGCTGCTCGACCGTGCCTTGGTCGACTCGCTCACCTCTATCTCAGAGTTCCT GGTCGTCACGCCCTGGCGCGGCGTCCTCGTCCCGGGGGAGCCCCGATGA
Upstream 100 bases:
>100_bases CCGGCTGATCCCGAGTCCGAAGACCTGCTGGCCCTAGCGGCGATCGCCGCCAGGTCGCACGGATCCCGCGCACGGGTCCC AGACCCGAAGGACCCGGCAG
Downstream 100 bases:
>100_bases CCCTGTCCCGCCCACCTTGCCGCTACGAGTACGTCGACAATGGCCCGGCCATCTACGTCGACTCCTTTGCCACCATCCGC CGAGAGGCCGACCTGTCGGC
Product: nitrite/sulfite reductase hemoprotein subunit beta
Products: Precorrin 3B; NAD+; H2O
Alternate protein names: Cobalamin Biosynthesis Protein; Cobalamin Biosynthesis B Synthase; Cobalamin Biosynthesis Protein CobG; Ferredoxin-Nitrite Reductase; Sulfite Reductase Beta Subunit; Sulfite Reductase Subunit Beta-Like Protein; Precorrin-3b Synthase Cobg; Nitrite/Sulfite Reductase Hemoprotein Beta Subunit
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MVTANRERSDRCPGALRPWAADDGLLVRLRLIGGRVSATSLRSLMSVAEEYGDGRIHLTSRTNLQIRALPSRDGRLPDEV LAAVEATGLLPSRAHDLVRNVMVSPQTGLAGGRADLRSVAAALDAALLAEPTLGELPGRFLFVLDDGRGDLLDRRCDLGL VAADAATCQLRIGDGHGPLVALDHAAGELAELGLRFLSRRGSGPTAAWHVRELPSELAAASAPDPRLPRSVGPLAYGEVP GGHHLEVPEGLLDRALVDSLTSISEFLVVTPWRGVLVPGEPR
Sequences:
>Translated_282_residues MVTANRERSDRCPGALRPWAADDGLLVRLRLIGGRVSATSLRSLMSVAEEYGDGRIHLTSRTNLQIRALPSRDGRLPDEV LAAVEATGLLPSRAHDLVRNVMVSPQTGLAGGRADLRSVAAALDAALLAEPTLGELPGRFLFVLDDGRGDLLDRRCDLGL VAADAATCQLRIGDGHGPLVALDHAAGELAELGLRFLSRRGSGPTAAWHVRELPSELAAASAPDPRLPRSVGPLAYGEVP GGHHLEVPEGLLDRALVDSLTSISEFLVVTPWRGVLVPGEPR >Mature_282_residues MVTANRERSDRCPGALRPWAADDGLLVRLRLIGGRVSATSLRSLMSVAEEYGDGRIHLTSRTNLQIRALPSRDGRLPDEV LAAVEATGLLPSRAHDLVRNVMVSPQTGLAGGRADLRSVAAALDAALLAEPTLGELPGRFLFVLDDGRGDLLDRRCDLGL VAADAATCQLRIGDGHGPLVALDHAAGELAELGLRFLSRRGSGPTAAWHVRELPSELAAASAPDPRLPRSVGPLAYGEVP GGHHLEVPEGLLDRALVDSLTSISEFLVVTPWRGVLVPGEPR
Specific function: Unknown
COG id: COG0155
COG function: function code P; Sulfite reductase, beta subunit (hemoprotein)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.14.13.83
Molecular weight: Translated: 29864; Mature: 29864
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTANRERSDRCPGALRPWAADDGLLVRLRLIGGRVSATSLRSLMSVAEEYGDGRIHLTS CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEE RTNLQIRALPSRDGRLPDEVLAAVEATGLLPSRAHDLVRNVMVSPQTGLAGGRADLRSVA CCCEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH AALDAALLAEPTLGELPGRFLFVLDDGRGDLLDRRCDLGLVAADAATCQLRIGDGHGPLV HHHHHHHHCCCCHHHCCCCEEEEEECCCCCHHHHHCCCCEEEECCEEEEEEECCCCCCEE ALDHAAGELAELGLRFLSRRGSGPTAAWHVRELPSELAAASAPDPRLPRSVGPLAYGEVP EEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCC GGHHLEVPEGLLDRALVDSLTSISEFLVVTPWRGVLVPGEPR CCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCEECCCCCC >Mature Secondary Structure MVTANRERSDRCPGALRPWAADDGLLVRLRLIGGRVSATSLRSLMSVAEEYGDGRIHLTS CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEE RTNLQIRALPSRDGRLPDEVLAAVEATGLLPSRAHDLVRNVMVSPQTGLAGGRADLRSVA CCCEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH AALDAALLAEPTLGELPGRFLFVLDDGRGDLLDRRCDLGLVAADAATCQLRIGDGHGPLV HHHHHHHHCCCCHHHCCCCEEEEEECCCCCHHHHHCCCCEEEECCEEEEEEECCCCCCEE ALDHAAGELAELGLRFLSRRGSGPTAAWHVRELPSELAAASAPDPRLPRSVGPLAYGEVP EEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCC GGHHLEVPEGLLDRALVDSLTSISEFLVVTPWRGVLVPGEPR CCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Precorrin 3A; NADH; H+; O2
Specific reaction: precorrin-3A + NADH + H+ + O2 = precorrin-3B + NAD+ + H2O
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA