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The map label for this gene is 119717094

Identifier: 119717094

GI number: 119717094

Start: 3049565

End: 3049966

Strand: Reverse

Name: 119717094

Synonym: Noca_2870

Alternate gene names: NA

Gene position: 3049966-3049565 (Counterclockwise)

Preceding gene: 119717095

Following gene: 119717093

Centisome position: 61.17

GC content: 74.88

Gene sequence:

>402_bases
GTGGATTCCGCGACCCGCAGCTACCGCACCGGCGACCGCGAGGCCGTCGTGGACCTCACCGAGGACTGCCGTGGGTTCGT
GGCGGGGCGAGGGGACGGCCTGCTGCAGGTGTTCGTCCCGCACGCGACGGCGGGGATCGCGATCATCGAGACCGGCGCCG
GCAGCGACGACGACCTGCTGGCCGCCCTGGCCGACCTGCTCCCGGCCGACGACCGCTGGCGGCACCGGCACGGCAGCCGC
GGCCACGGCCGCTCGCACGTGCTGCCCGCGCTGGTGCCGCCGTACGCCACCGTCCCGGTGCTCGGCGGCCGGCTCGCGCT
CGGCACCTGGCAGAGCGTGTGCCTGGTCGACCTCAACATCGACAATGCCGAGCGCGAGGTGCGGCTCAGCTTCCTCGGCT
GA

Upstream 100 bases:

>100_bases
GTCGCTGCCGGCCTCCTCGAGCAGCGCGAGGTCAGTCCGGTAGGCCAGCGAGCGTACGTCCACGGGGGCGACCGTAGCGG
TCCGTGGCACGATCGAACGC

Downstream 100 bases:

>100_bases
GCCAGGACCGCGGCCAGTGCCCGACGATCGGAGTGGTCGGGGGTCGCGCTGCTAGGCTCGTGGTGTTGAAGGGGCTCCGG
CTCCTCGGTGGCCGGTCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MDSATRSYRTGDREAVVDLTEDCRGFVAGRGDGLLQVFVPHATAGIAIIETGAGSDDDLLAALADLLPADDRWRHRHGSR
GHGRSHVLPALVPPYATVPVLGGRLALGTWQSVCLVDLNIDNAEREVRLSFLG

Sequences:

>Translated_133_residues
MDSATRSYRTGDREAVVDLTEDCRGFVAGRGDGLLQVFVPHATAGIAIIETGAGSDDDLLAALADLLPADDRWRHRHGSR
GHGRSHVLPALVPPYATVPVLGGRLALGTWQSVCLVDLNIDNAEREVRLSFLG
>Mature_133_residues
MDSATRSYRTGDREAVVDLTEDCRGFVAGRGDGLLQVFVPHATAGIAIIETGAGSDDDLLAALADLLPADDRWRHRHGSR
GHGRSHVLPALVPPYATVPVLGGRLALGTWQSVCLVDLNIDNAEREVRLSFLG

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 14226; Mature: 14226

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSATRSYRTGDREAVVDLTEDCRGFVAGRGDGLLQVFVPHATAGIAIIETGAGSDDDLL
CCCCCCCCCCCCCCEEEECHHHHCEEECCCCCCEEEEEECCCCCCEEEEECCCCCCHHHH
AALADLLPADDRWRHRHGSRGHGRSHVLPALVPPYATVPVLGGRLALGTWQSVCLVDLNI
HHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEECC
DNAEREVRLSFLG
CCCCCEEEEEECC
>Mature Secondary Structure
MDSATRSYRTGDREAVVDLTEDCRGFVAGRGDGLLQVFVPHATAGIAIIETGAGSDDDLL
CCCCCCCCCCCCCCEEEECHHHHCEEECCCCCCEEEEEECCCCCCEEEEECCCCCCHHHH
AALADLLPADDRWRHRHGSRGHGRSHVLPALVPPYATVPVLGGRLALGTWQSVCLVDLNI
HHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEECC
DNAEREVRLSFLG
CCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]