Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119716936

Identifier: 119716936

GI number: 119716936

Start: 2885615

End: 2886094

Strand: Reverse

Name: 119716936

Synonym: Noca_2711

Alternate gene names: NA

Gene position: 2886094-2885615 (Counterclockwise)

Preceding gene: 119716937

Following gene: 119716935

Centisome position: 57.89

GC content: 69.58

Gene sequence:

>480_bases
GTGGTGCGCGAAGTCGATGTCATGGGAGTCAGGGTGGAGATGCCCTCGAACCAGCCGATCGTGCTGCTGCGCGAGGTCTC
GGGCGAGCGCTACCTCCCCATCTGGATCGGTGCGGTGGAGGCGACGGCGATCGCCTTCGCCCAGCAGGGAGTGGTCCCGC
CCCGGCCGCTGACGCACGACCTGATGAAGGACGTGCTCGAGGCCACCGGCAACGAGCTGACCGAGGTGCAGATCACCGAC
GTCAAGGACGGGGTGTTCTTCGCGACCCTCGTGTTCGGCTCCGGGGCCGAGGTCAGTGCGCGCCCGTCGGACTCGATCGC
GCTCGCGCTGCGCACCGGCACCCGGATCGTCTGCGCGGAGGAGGTGCTCGACGAGGCCGGCCTCGCCGTACCCGCCGAGC
AGGAGGACGAGGTCGAGAAGTTCCGCGAGTTCCTCGACCAGGTCACCCCCGAGGACTTCGACGCCCCGACCGAGCCCTGA

Upstream 100 bases:

>100_bases
CCCGAAACTTCGGCCGAGAAGTTCCGGTTTTGGCCGAGAAGTACGGCGGGTGCGGGCCCCCGAGCCATCGGGTCGGCTGT
CGCGCCGGGGGTACTGTGGA

Downstream 100 bases:

>100_bases
GCGCACCGATGGCGCGCACCTGGCGGCGTTGCCGTCGGGTCGAACCACTGTCGTTTGGTCCCCAACAGCAGAGATCCGGC
GCTGCCCATTGCAGTTGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MVREVDVMGVRVEMPSNQPIVLLREVSGERYLPIWIGAVEATAIAFAQQGVVPPRPLTHDLMKDVLEATGNELTEVQITD
VKDGVFFATLVFGSGAEVSARPSDSIALALRTGTRIVCAEEVLDEAGLAVPAEQEDEVEKFREFLDQVTPEDFDAPTEP

Sequences:

>Translated_159_residues
MVREVDVMGVRVEMPSNQPIVLLREVSGERYLPIWIGAVEATAIAFAQQGVVPPRPLTHDLMKDVLEATGNELTEVQITD
VKDGVFFATLVFGSGAEVSARPSDSIALALRTGTRIVCAEEVLDEAGLAVPAEQEDEVEKFREFLDQVTPEDFDAPTEP
>Mature_159_residues
MVREVDVMGVRVEMPSNQPIVLLREVSGERYLPIWIGAVEATAIAFAQQGVVPPRPLTHDLMKDVLEATGNELTEVQITD
VKDGVFFATLVFGSGAEVSARPSDSIALALRTGTRIVCAEEVLDEAGLAVPAEQEDEVEKFREFLDQVTPEDFDAPTEP

Specific function: Unknown

COG id: COG1259

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003729 [H]

Pfam domain/function: PF02577 DUF151 [H]

EC number: NA

Molecular weight: Translated: 17324; Mature: 17324

Theoretical pI: Translated: 3.93; Mature: 3.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVREVDVMGVRVEMPSNQPIVLLREVSGERYLPIWIGAVEATAIAFAQQGVVPPRPLTHD
CCCEEEEEEEEEECCCCCCEEEEEECCCCEEEEEEEEHHHHHHHHHHHCCCCCCCCCHHH
LMKDVLEATGNELTEVQITDVKDGVFFATLVFGSGAEVSARPSDSIALALRTGTRIVCAE
HHHHHHHHCCCCEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCEEEEHH
EVLDEAGLAVPAEQEDEVEKFREFLDQVTPEDFDAPTEP
HHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MVREVDVMGVRVEMPSNQPIVLLREVSGERYLPIWIGAVEATAIAFAQQGVVPPRPLTHD
CCCEEEEEEEEEECCCCCCEEEEEECCCCEEEEEEEEHHHHHHHHHHHCCCCCCCCCHHH
LMKDVLEATGNELTEVQITDVKDGVFFATLVFGSGAEVSARPSDSIALALRTGTRIVCAE
HHHHHHHHCCCCEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCEEEEHH
EVLDEAGLAVPAEQEDEVEKFREFLDQVTPEDFDAPTEP
HHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]