| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716905
Identifier: 119716905
GI number: 119716905
Start: 2852274
End: 2852570
Strand: Reverse
Name: 119716905
Synonym: Noca_2680
Alternate gene names: NA
Gene position: 2852570-2852274 (Counterclockwise)
Preceding gene: 119716906
Following gene: 119716901
Centisome position: 57.21
GC content: 73.4
Gene sequence:
>297_bases GTGAGCGCTCCCGACGAGGGTGGTACCGGCTACGAGGTCGTCTTCACCCGAGGCGCTCGGCGCGCCCTGGAGTGGGACCT GCCGGCGGCCGTGGCGATGGCGGCGTTCGAGTTCATCCGCGGGCCGCTGCGCGAAGCGCCCCGCCGCGTGGGCAAACCCC TCCTCGAGCCGCTCACGCCGCTGTGGTCGGCGCGGAGGGGCGAGTACCGCATCCTGTATCGCATCCTCGACCGGCGCCTG GTGATCGCGGTGGTCACGATCGCGCACCGGCGAGACGCCTACGGGCGCCGGGAGTGA
Upstream 100 bases:
>100_bases TCGAGGCCCTGCGCGCGGGGCTGGCGGACCTCGAGGCCGGGGAGGTCTCGACGCTCGACGAGGTCCGCGTCGCGATGCAG CGACGCGGGCGACTGCCCGC
Downstream 100 bases:
>100_bases GAGCCGCCGGGGCAGGCTGCGGGCGGCGCTGACGGTCGTGGTCCCGGACCACCCGTGGATCGGGCGGCTGCGGGGCCTCC GGGGAGCGGGCTCAGCCTGC
Product: plasmid stabilization system protein
Products: NA
Alternate protein names: Plasmid Stabilization System Protein; Xin-Like Protein
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MSAPDEGGTGYEVVFTRGARRALEWDLPAAVAMAAFEFIRGPLREAPRRVGKPLLEPLTPLWSARRGEYRILYRILDRRL VIAVVTIAHRRDAYGRRE
Sequences:
>Translated_98_residues MSAPDEGGTGYEVVFTRGARRALEWDLPAAVAMAAFEFIRGPLREAPRRVGKPLLEPLTPLWSARRGEYRILYRILDRRL VIAVVTIAHRRDAYGRRE >Mature_97_residues SAPDEGGTGYEVVFTRGARRALEWDLPAAVAMAAFEFIRGPLREAPRRVGKPLLEPLTPLWSARRGEYRILYRILDRRLV IAVVTIAHRRDAYGRRE
Specific function: Unknown
COG id: COG2026
COG function: function code JD; Cytotoxic translational repressor of toxin-antitoxin stability system
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11191; Mature: 11060
Theoretical pI: Translated: 11.12; Mature: 11.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPDEGGTGYEVVFTRGARRALEWDLPAAVAMAAFEFIRGPLREAPRRVGKPLLEPLTP CCCCCCCCCCEEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LWSARRGEYRILYRILDRRLVIAVVTIAHRRDAYGRRE HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SAPDEGGTGYEVVFTRGARRALEWDLPAAVAMAAFEFIRGPLREAPRRVGKPLLEPLTP CCCCCCCCCEEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LWSARRGEYRILYRILDRRLVIAVVTIAHRRDAYGRRE HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA