| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is 119716894
Identifier: 119716894
GI number: 119716894
Start: 2839317
End: 2839703
Strand: Reverse
Name: 119716894
Synonym: Noca_2669
Alternate gene names: NA
Gene position: 2839703-2839317 (Counterclockwise)
Preceding gene: 119716895
Following gene: 119716886
Centisome position: 56.96
GC content: 70.03
Gene sequence:
>387_bases ATGGCGGAGCGCACACTGCGGGGAGCGCGGCTCGGGGGCCAGAGTTTCGAGGATGAGCGCGGCATCGAGTTCGCGGCTCG TCAGCAGGTCGGTTACCGGTGTCCCCAGGGGCACGAGTTCGAGATCACGATGTCGGTCGAGGCGGACGTGCCCGCCGTCT GGGAGTGCCCGCGGTGTGGGGCCGAGGCGCTGAGCGTCTCCGGCATCCAGCCCGAGGCCAAGGCGGAGAAGCCGGCGCGG ACGCACTGGGACATGCTCTTGGAGCGGCGCTCGGAGAAGGAGCTCGAGGACATCCTCAAGGAGCGGCTGCAGCTGCTCCG CGACGGGGAGATCGGGCCCGCGCACCTGCACCGCGCCAACCAGAAGAAGCGCAAGGCGACTGCCTGA
Upstream 100 bases:
>100_bases TACAAAGAGATCCCGGAGTCCGGTGTCGCGAACGCTGTCACGAACACGGGGTTCGTCCGTCTCGGTCAATACATGGGGAC AACAAATCGGGAGGTGGCTC
Downstream 100 bases:
>100_bases CGGCTACTCGTCGACCACCTCGCCCCGGACGACCGGGCCCTCGGGCCCGCGTCCGGGGCGAGTCGCATTCCCAGGGCCGT TTCCGAGCACCCGGCGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MAERTLRGARLGGQSFEDERGIEFAARQQVGYRCPQGHEFEITMSVEADVPAVWECPRCGAEALSVSGIQPEAKAEKPAR THWDMLLERRSEKELEDILKERLQLLRDGEIGPAHLHRANQKKRKATA
Sequences:
>Translated_128_residues MAERTLRGARLGGQSFEDERGIEFAARQQVGYRCPQGHEFEITMSVEADVPAVWECPRCGAEALSVSGIQPEAKAEKPAR THWDMLLERRSEKELEDILKERLQLLRDGEIGPAHLHRANQKKRKATA >Mature_127_residues AERTLRGARLGGQSFEDERGIEFAARQQVGYRCPQGHEFEITMSVEADVPAVWECPRCGAEALSVSGIQPEAKAEKPART HWDMLLERRSEKELEDILKERLQLLRDGEIGPAHLHRANQKKRKATA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14478; Mature: 14346
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: PS00202 RUBREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAERTLRGARLGGQSFEDERGIEFAARQQVGYRCPQGHEFEITMSVEADVPAVWECPRCG CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCC AEALSVSGIQPEAKAEKPARTHWDMLLERRSEKELEDILKERLQLLRDGEIGPAHLHRAN HHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH QKKRKATA HHHHCCCC >Mature Secondary Structure AERTLRGARLGGQSFEDERGIEFAARQQVGYRCPQGHEFEITMSVEADVPAVWECPRCG CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCC AEALSVSGIQPEAKAEKPARTHWDMLLERRSEKELEDILKERLQLLRDGEIGPAHLHRAN HHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH QKKRKATA HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA