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The map label for this gene is 119716792

Identifier: 119716792

GI number: 119716792

Start: 2735553

End: 2736467

Strand: Reverse

Name: 119716792

Synonym: Noca_2566

Alternate gene names: NA

Gene position: 2736467-2735553 (Counterclockwise)

Preceding gene: 119716794

Following gene: 119716788

Centisome position: 54.88

GC content: 72.35

Gene sequence:

>915_bases
GTGCGTTCGTTGCGGTTCCTGCTCAGTCGACGCTGGTTGGCGTTCGCCCTGATCGTGGTGCTGCTCGGCTACGCCGCGTG
GTGGTTGGGCGAGTGGCAGTTCGGCCGGCTCGCCGACCGCAAGGACAGCAATGCGGTGGTCCGTGCCAACGAGCACAAGG
AGCCGGCGCCGGTCGCGGACGTCCTCGCGCCCGGCCGAGCGGTCGACGAGGCCCACGAGTGGCGGGTGGTCACCGCCACC
GGGACCTACGCCACCGAGGACACCGTGATCGTCCGCTACCGCACCCGCGAGGGGTCCTCGGGCATCGACATCGTCGTCCC
CCTGGTGACCCCCGACGGGACCGCGCTGCTGGTCGACCGCGGCTGGATGCCGACCGACAACCAGGGTGCCGGGCCCGGCG
CTGTGCCCGCTCCGCCCGAGGGCCGGGTGACGGTCGAGGGATGGGTGCGCGCCGATGCCGAGGGAGACAGCACCGTGGTC
GACGACAACTCGACGCGGGCGATCTCCAGCGAGCGGATCGGCGCCGCGCTCGACCGGACGGTGTACGGCGGCTTCGTCGT
CCTCAAGTCCGAGGACGGCCGGCCCGCGGCCGAGCTCGAGCCGGTCGAGCTCCCCGAGCTCGACAACGGCCCGCACTTCT
TCTACGGCCTCCAGTGGTGGTTCTTCGGCGTCCTCGCCGTCTTCGGCTTCCTCTACCTCGCCTTCGACGAGTGGCGCAGC
CGCCACCGGGACGCAGACCCGGCCGGCGCCGACACGCCAGCCGAGACGACAGCCGACGAGCCAATCGACAAGACAACCGA
CAAGGCGCGACGCCGGTCGGCCAAGAACGCCAGGAAGCAGGCCGTGCGGGCCGCCTACGAGCGGGCCTGGGAGGAAGAGC
GGCGTCAGCGCGACCGGGGCGCCGGCTCCCGCTGA

Upstream 100 bases:

>100_bases
CGCAGGTCCGTCGCGACCCGCCCGTAGCGGTCCGAGAGCGTTCTGGGATGCGGCACCCCTGCAGTCTAGGCGGACCACGG
TCGCCGGATAGCCTCGGCGA

Downstream 100 bases:

>100_bases
GGCCCCGGCCGACCGGTCTGTCTCAGACCGTCGCGGACGGCTGGTCCTCGATGAACTGGGTGCGGTACAGGTCGGCGTAC
AGGCCGCCCCGGGCGAGCAG

Product: membrane spanning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MRSLRFLLSRRWLAFALIVVLLGYAAWWLGEWQFGRLADRKDSNAVVRANEHKEPAPVADVLAPGRAVDEAHEWRVVTAT
GTYATEDTVIVRYRTREGSSGIDIVVPLVTPDGTALLVDRGWMPTDNQGAGPGAVPAPPEGRVTVEGWVRADAEGDSTVV
DDNSTRAISSERIGAALDRTVYGGFVVLKSEDGRPAAELEPVELPELDNGPHFFYGLQWWFFGVLAVFGFLYLAFDEWRS
RHRDADPAGADTPAETTADEPIDKTTDKARRRSAKNARKQAVRAAYERAWEEERRQRDRGAGSR

Sequences:

>Translated_304_residues
MRSLRFLLSRRWLAFALIVVLLGYAAWWLGEWQFGRLADRKDSNAVVRANEHKEPAPVADVLAPGRAVDEAHEWRVVTAT
GTYATEDTVIVRYRTREGSSGIDIVVPLVTPDGTALLVDRGWMPTDNQGAGPGAVPAPPEGRVTVEGWVRADAEGDSTVV
DDNSTRAISSERIGAALDRTVYGGFVVLKSEDGRPAAELEPVELPELDNGPHFFYGLQWWFFGVLAVFGFLYLAFDEWRS
RHRDADPAGADTPAETTADEPIDKTTDKARRRSAKNARKQAVRAAYERAWEEERRQRDRGAGSR
>Mature_304_residues
MRSLRFLLSRRWLAFALIVVLLGYAAWWLGEWQFGRLADRKDSNAVVRANEHKEPAPVADVLAPGRAVDEAHEWRVVTAT
GTYATEDTVIVRYRTREGSSGIDIVVPLVTPDGTALLVDRGWMPTDNQGAGPGAVPAPPEGRVTVEGWVRADAEGDSTVV
DDNSTRAISSERIGAALDRTVYGGFVVLKSEDGRPAAELEPVELPELDNGPHFFYGLQWWFFGVLAVFGFLYLAFDEWRS
RHRDADPAGADTPAETTADEPIDKTTDKARRRSAKNARKQAVRAAYERAWEEERRQRDRGAGSR

Specific function: Unknown

COG id: COG3346

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SURF1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002994 [H]

Pfam domain/function: PF02104 SURF1 [H]

EC number: NA

Molecular weight: Translated: 33734; Mature: 33734

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS50895 SURF1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLRFLLSRRWLAFALIVVLLGYAAWWLGEWQFGRLADRKDSNAVVRANEHKEPAPVAD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCHHH
VLAPGRAVDEAHEWRVVTATGTYATEDTVIVRYRTREGSSGIDIVVPLVTPDGTALLVDR
HHCCCCHHCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEC
GWMPTDNQGAGPGAVPAPPEGRVTVEGWVRADAEGDSTVVDDNSTRAISSERIGAALDRT
CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHH
VYGGFVVLKSEDGRPAAELEPVELPELDNGPHFFYGLQWWFFGVLAVFGFLYLAFDEWRS
EECCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH
RHRDADPAGADTPAETTADEPIDKTTDKARRRSAKNARKQAVRAAYERAWEEERRQRDRG
HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AGSR
CCCC
>Mature Secondary Structure
MRSLRFLLSRRWLAFALIVVLLGYAAWWLGEWQFGRLADRKDSNAVVRANEHKEPAPVAD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCHHH
VLAPGRAVDEAHEWRVVTATGTYATEDTVIVRYRTREGSSGIDIVVPLVTPDGTALLVDR
HHCCCCHHCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEC
GWMPTDNQGAGPGAVPAPPEGRVTVEGWVRADAEGDSTVVDDNSTRAISSERIGAALDRT
CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHH
VYGGFVVLKSEDGRPAAELEPVELPELDNGPHFFYGLQWWFFGVLAVFGFLYLAFDEWRS
EECCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH
RHRDADPAGADTPAETTADEPIDKTTDKARRRSAKNARKQAVRAAYERAWEEERRQRDRG
HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AGSR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]