Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119716774
Identifier: 119716774
GI number: 119716774
Start: 2717811
End: 2718671
Strand: Reverse
Name: 119716774
Synonym: Noca_2548
Alternate gene names: NA
Gene position: 2718671-2717811 (Counterclockwise)
Preceding gene: 119716784
Following gene: 119716773
Centisome position: 54.53
GC content: 76.77
Gene sequence:
>861_bases ATGATCGCCCGTCTTCGCGCCGTTCTCGGCTCCCGCACCGTGCTGGCTCTCGGGGTGCTCGTCAGCATCCTCGTCCCCGT GCTCACGCTCCCCCGGCTCCCGGAGGTCTCGCTCTGGCCGGTGCTCGCCGGGCTGCTCCCGTGGGTGGTCGGCAAGTACC TGCTCTGCCCGCTCCGCTGGCGGGCGCTCACGGACGCCGACCTGTCGCGCCGCTGGCACCTGCGTGCCTACGCCGAGTCC GAGCTCCTCGGGTTGCTCACCCCCGGCCACGTCGGCGCCGACCTGTGGCGGCTCAAGCGGCTCACCGGCACCGGGCTCGG TCGCGGCGACGCGGTCCTGAGCGTGGGCACCGACCGCCTGGTCGGCGCCCTGGGACTCGCCGCGTTCGTCGCGTGCGCCG GTACGGCGCTGCCGCTGGACCTGATCCTGCCGGTGGCGTTCCTGTCCCTGGCCGCCGTCGTAGCCGTCCTGGTGCTGCGC CGGGTCCGGCCCGACCTGCTCCCCAGCCGCCCGCTGCCCCCGTGGCGCACCCTGCTCCACGGGCTGGTGCTCTCCGCGGG CTACCAGCTCTCGATCGCCGCGCTGCTCCTCGGCGCGGTGGCCGCCACCGGGAACACCGTGTCCCCGCTCGCCGTGCTGG GCGCGTTCGGGGCCAGCCAGCTGGCCGGAGCGGTCCCCGGCCCCAACGGCGCGAGTCCGCGCGACGGCGCGCTCGTGGTC GCGCTCGTCGCCGCCGGCGTACCCCTCGCGGCGGCCGCCGCCGCGGTGACCCTCAAGGCCTCGGTCGCCTGGTTGCCCGC ACTGGCGCTCGGCGGCACCAGCCTCCTCGCCGGTCGCCGGACGGCGACCGTGGCGGCCTGA
Upstream 100 bases:
>100_bases CCTAACCCTGTTTTGCCATCCGCCTCCCGTGGGTGACACTGGAGATCCACGCCGCAACGACGCCGCGACCACGCCGACCC GAAGGTCTCCTGCCTCCCGC
Downstream 100 bases:
>100_bases CCCGGCCCCGGTCCGAGCCAACTCGGGACCTTCGCCCCACGACGCGGGGGCGCCGGCACGGCAGCATCGATCGTGGGCCA CCCCGACGCCGACACCCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MIARLRAVLGSRTVLALGVLVSILVPVLTLPRLPEVSLWPVLAGLLPWVVGKYLLCPLRWRALTDADLSRRWHLRAYAES ELLGLLTPGHVGADLWRLKRLTGTGLGRGDAVLSVGTDRLVGALGLAAFVACAGTALPLDLILPVAFLSLAAVVAVLVLR RVRPDLLPSRPLPPWRTLLHGLVLSAGYQLSIAALLLGAVAATGNTVSPLAVLGAFGASQLAGAVPGPNGASPRDGALVV ALVAAGVPLAAAAAAVTLKASVAWLPALALGGTSLLAGRRTATVAA
Sequences:
>Translated_286_residues MIARLRAVLGSRTVLALGVLVSILVPVLTLPRLPEVSLWPVLAGLLPWVVGKYLLCPLRWRALTDADLSRRWHLRAYAES ELLGLLTPGHVGADLWRLKRLTGTGLGRGDAVLSVGTDRLVGALGLAAFVACAGTALPLDLILPVAFLSLAAVVAVLVLR RVRPDLLPSRPLPPWRTLLHGLVLSAGYQLSIAALLLGAVAATGNTVSPLAVLGAFGASQLAGAVPGPNGASPRDGALVV ALVAAGVPLAAAAAAVTLKASVAWLPALALGGTSLLAGRRTATVAA >Mature_286_residues MIARLRAVLGSRTVLALGVLVSILVPVLTLPRLPEVSLWPVLAGLLPWVVGKYLLCPLRWRALTDADLSRRWHLRAYAES ELLGLLTPGHVGADLWRLKRLTGTGLGRGDAVLSVGTDRLVGALGLAAFVACAGTALPLDLILPVAFLSLAAVVAVLVLR RVRPDLLPSRPLPPWRTLLHGLVLSAGYQLSIAALLLGAVAATGNTVSPLAVLGAFGASQLAGAVPGPNGASPRDGALVV ALVAAGVPLAAAAAAVTLKASVAWLPALALGGTSLLAGRRTATVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29172; Mature: 29172
Theoretical pI: Translated: 11.91; Mature: 11.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIARLRAVLGSRTVLALGVLVSILVPVLTLPRLPEVSLWPVLAGLLPWVVGKYLLCPLRW CHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHH RALTDADLSRRWHLRAYAESELLGLLTPGHVGADLWRLKRLTGTGLGRGDAVLSVGTDRL HHCCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCCCCCEEEECCHHHH VGALGLAAFVACAGTALPLDLILPVAFLSLAAVVAVLVLRRVRPDLLPSRPLPPWRTLLH HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH GLVLSAGYQLSIAALLLGAVAATGNTVSPLAVLGAFGASQLAGAVPGPNGASPRDGALVV HHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHCCCCCCCCCCCCCCCHHHH ALVAAGVPLAAAAAAVTLKASVAWLPALALGGTSLLAGRRTATVAA HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHCCCC >Mature Secondary Structure MIARLRAVLGSRTVLALGVLVSILVPVLTLPRLPEVSLWPVLAGLLPWVVGKYLLCPLRW CHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHH RALTDADLSRRWHLRAYAESELLGLLTPGHVGADLWRLKRLTGTGLGRGDAVLSVGTDRL HHCCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCCCCCEEEECCHHHH VGALGLAAFVACAGTALPLDLILPVAFLSLAAVVAVLVLRRVRPDLLPSRPLPPWRTLLH HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH GLVLSAGYQLSIAALLLGAVAATGNTVSPLAVLGAFGASQLAGAVPGPNGASPRDGALVV HHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHCCCCCCCCCCCCCCCHHHH ALVAAGVPLAAAAAAVTLKASVAWLPALALGGTSLLAGRRTATVAA HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA