Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119716683
Identifier: 119716683
GI number: 119716683
Start: 2617305
End: 2617751
Strand: Reverse
Name: 119716683
Synonym: Noca_2457
Alternate gene names: NA
Gene position: 2617751-2617305 (Counterclockwise)
Preceding gene: 119716693
Following gene: 119716682
Centisome position: 52.5
GC content: 74.27
Gene sequence:
>447_bases GTGGACGACGCATCGTGGGCAGCACTGACGCTGAGCCTGACCGTGCTCGGGGCCATCTGGACCTGGCTGTCCTTCCGCCG CCGCGGGCTGGCCTCCGGGCTGCGGGCCCTGGCCTTCACGCTGCTGCCCGTGGCGGCCTACCTGACCAAGACGCTGCGGA TGTTCACCCGGATCGCCGACGCGATCGGTGACTGGGCCCTCAACCTGGCGTGGAACCCGACCGTCTGGGCCGGCATCGTG GTCGCGGGCGTCTCCGGCGTGCTGTTCGTGGTCTCCGGCGCGATGCGGGCCCGCCAGCTCGGCGGGCGCCGCGACAAGCG GGACGACGCGCCGCGCGCGGTCGCCGCGCCGAAGCGGGCGCGGGGCTCCGCACCGGTCGTCGACGACGCTGTCGACGGCG AGCTGGCCGAGATCGAGGCGCTGCTGCGCAAGCGCGGCATCAGCTGA
Upstream 100 bases:
>100_bases CGGGGTCGGGGATGGTGGTGCGCTCGCTCACCCGACGATTGTCCCGACCGGGCCGCCCGGGCGCCAATCAGGTCACCTGC GATGTGGGACCCTTGACCAC
Downstream 100 bases:
>100_bases TGGTCCCCGCCACACCCGTGTCGCAGGGCTTCGTCGACCGCAACCGCCTGTGCGCCCGGCTCAACGGCGCGGTCGAGCAG CACGGCACCTCGCTGCCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MDDASWAALTLSLTVLGAIWTWLSFRRRGLASGLRALAFTLLPVAAYLTKTLRMFTRIADAIGDWALNLAWNPTVWAGIV VAGVSGVLFVVSGAMRARQLGGRRDKRDDAPRAVAAPKRARGSAPVVDDAVDGELAEIEALLRKRGIS
Sequences:
>Translated_148_residues MDDASWAALTLSLTVLGAIWTWLSFRRRGLASGLRALAFTLLPVAAYLTKTLRMFTRIADAIGDWALNLAWNPTVWAGIV VAGVSGVLFVVSGAMRARQLGGRRDKRDDAPRAVAAPKRARGSAPVVDDAVDGELAEIEALLRKRGIS >Mature_148_residues MDDASWAALTLSLTVLGAIWTWLSFRRRGLASGLRALAFTLLPVAAYLTKTLRMFTRIADAIGDWALNLAWNPTVWAGIV VAGVSGVLFVVSGAMRARQLGGRRDKRDDAPRAVAAPKRARGSAPVVDDAVDGELAEIEALLRKRGIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15886; Mature: 15886
Theoretical pI: Translated: 11.55; Mature: 11.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDASWAALTLSLTVLGAIWTWLSFRRRGLASGLRALAFTLLPVAAYLTKTLRMFTRIAD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIGDWALNLAWNPTVWAGIVVAGVSGVLFVVSGAMRARQLGGRRDKRDDAPRAVAAPKRA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCHHC RGSAPVVDDAVDGELAEIEALLRKRGIS CCCCCCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MDDASWAALTLSLTVLGAIWTWLSFRRRGLASGLRALAFTLLPVAAYLTKTLRMFTRIAD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIGDWALNLAWNPTVWAGIVVAGVSGVLFVVSGAMRARQLGGRRDKRDDAPRAVAAPKRA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCHHC RGSAPVVDDAVDGELAEIEALLRKRGIS CCCCCCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA