Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is porA [H]
Identifier: 119716587
GI number: 119716587
Start: 2516220
End: 2517425
Strand: Reverse
Name: porA [H]
Synonym: Noca_2360
Alternate gene names: 119716587
Gene position: 2517425-2516220 (Counterclockwise)
Preceding gene: 119716588
Following gene: 119716586
Centisome position: 50.49
GC content: 72.47
Gene sequence:
>1206_bases ATGTTTGAGCAGCTCGAAGGCTCCCGCGCGGTCGCCACGGCGGTGGCTCGCTGCCGGCCCGCCGTGATCGCGGCGTACCC CATCTCGCCGCAGACCCACATCGTCGAGGCGCTCTCCGACTTCGTCCGCACCGGTGAGCTGCGCGGGTGCGAGTACCTCA TGGTCGAGTCGGAGTTCGGGGCCATGTCGGCGTGCATCGGTGCCTCCGGCGTCGGGGCGCGGACCTACACCGCGACCGCG AGCCAGGGCCTGTTGTTCATGGCCGAGGCGCTCTTCAACGCCTCGGGCCTCGGGCTGCCGATCGTGATGACGGTCGCGAA CCGGGCGATCGGCTCGCCGATCAACATCTGGAACGACCAGTCCGACTCGATGTCGCAGCGCGATGCGGGCTGGGTGCAGC TGTTCGCGGTCTCCAACCAGGAGGCCGTCGACCTGCACCTGCAGGCGTTCGTCCTCGCCGAGCGCCTGTCGCTGCCGGTG ATGGTGTGCATGGACGGCTTCGTGCTCACCCACGCGGTGGAGGCCATCGACGTGCCGGAGCAGGCCCAGGTCGACGCGTT CCTGCCCCCGTTCGTGCCACGCCAGCACCTGGACCCGAGCGACCCGATCACGATCGGCTCGATGGTCGGCCCGGAGGCGT TCACCGAGGTCCGCTACCTCATGCACGACCAGCAGCTCGCGGCCCTCGACGAGCTGCCCCGGATCCAGCGGGACTTCCAC GCGGAGTTCGGCCGGGACACCGGCGGCCTGGTGCGGCCCTACCGCACCGAGGACGCCGACGTCGTCGTGGTGGCGCTCGG CTCGGTGCTCGGGGGCGTCAACGAGGTCGTCGACGCGCTCCGCGAGGACGGCATCGCTGCCGGCTCGCTCGGCATCACCT GCTTCCGGCCCTGGCCGCTCGACGCCGTGCGCGAGGCGCTCGGATCGGCGCGCCAGGTGGTCGTGGTCGAGCGCGCCTTC TCCCCCGGCGTCGGCGGCATCGTCGGACGGGACGTCCGGCTGGCCCTGCGCGGGACCGTCGGCGGCGGCCCGGCGGTGTA CGACGTCGTGGCCGGCCTCGGCGGACGCCCGGTGACCCGCGGCTCGCTGCGCCGGCTCGTCGACGACGTCCTCGCGGAGC GGCTCGACCCACGCGGCCTGCACTTCCTGGACCTCGACCATGACCTGCTCGCGCGGGCCGGTACCCCCTGGAGGAGGACG TCGTGA
Upstream 100 bases:
>100_bases GTGACGACGGCGATCCGGCACCGGTTCGGCGGCGTGCTGCCGCCGGACATCGTCGAGGCGAACGTCGAGGTCGCCACCCG AGCGCATGGGGTGATCTGTC
Downstream 100 bases:
>100_bases CGGATCTCAAGCTCTACCAGGTCGGCACCTTCGCGGCCGGCAACCGGCTCGTCGACCTCGAGCTCCGCTCCGTGCAGGCG CACCCCGACCGGACGAACTC
Product: pyruvate ferredoxin oxidoreductase subunit alpha
Products: NA
Alternate protein names: Pyruvate oxidoreductase alpha chain; POR; Pyruvic-ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MFEQLEGSRAVATAVARCRPAVIAAYPISPQTHIVEALSDFVRTGELRGCEYLMVESEFGAMSACIGASGVGARTYTATA SQGLLFMAEALFNASGLGLPIVMTVANRAIGSPINIWNDQSDSMSQRDAGWVQLFAVSNQEAVDLHLQAFVLAERLSLPV MVCMDGFVLTHAVEAIDVPEQAQVDAFLPPFVPRQHLDPSDPITIGSMVGPEAFTEVRYLMHDQQLAALDELPRIQRDFH AEFGRDTGGLVRPYRTEDADVVVVALGSVLGGVNEVVDALREDGIAAGSLGITCFRPWPLDAVREALGSARQVVVVERAF SPGVGGIVGRDVRLALRGTVGGGPAVYDVVAGLGGRPVTRGSLRRLVDDVLAERLDPRGLHFLDLDHDLLARAGTPWRRT S
Sequences:
>Translated_401_residues MFEQLEGSRAVATAVARCRPAVIAAYPISPQTHIVEALSDFVRTGELRGCEYLMVESEFGAMSACIGASGVGARTYTATA SQGLLFMAEALFNASGLGLPIVMTVANRAIGSPINIWNDQSDSMSQRDAGWVQLFAVSNQEAVDLHLQAFVLAERLSLPV MVCMDGFVLTHAVEAIDVPEQAQVDAFLPPFVPRQHLDPSDPITIGSMVGPEAFTEVRYLMHDQQLAALDELPRIQRDFH AEFGRDTGGLVRPYRTEDADVVVVALGSVLGGVNEVVDALREDGIAAGSLGITCFRPWPLDAVREALGSARQVVVVERAF SPGVGGIVGRDVRLALRGTVGGGPAVYDVVAGLGGRPVTRGSLRRLVDDVLAERLDPRGLHFLDLDHDLLARAGTPWRRT S >Mature_401_residues MFEQLEGSRAVATAVARCRPAVIAAYPISPQTHIVEALSDFVRTGELRGCEYLMVESEFGAMSACIGASGVGARTYTATA SQGLLFMAEALFNASGLGLPIVMTVANRAIGSPINIWNDQSDSMSQRDAGWVQLFAVSNQEAVDLHLQAFVLAERLSLPV MVCMDGFVLTHAVEAIDVPEQAQVDAFLPPFVPRQHLDPSDPITIGSMVGPEAFTEVRYLMHDQQLAALDELPRIQRDFH AEFGRDTGGLVRPYRTEDADVVVVALGSVLGGVNEVVDALREDGIAAGSLGITCFRPWPLDAVREALGSARQVVVVERAF SPGVGGIVGRDVRLALRGTVGGGPAVYDVVAGLGGRPVTRGSLRRLVDDVLAERLDPRGLHFLDLDHDLLARAGTPWRRT S
Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]
COG id: COG0674
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787642, Length=335, Percent_Identity=29.8507462686567, Blast_Score=127, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002880 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005476 [H]
Pfam domain/function: PF01855 POR_N; PF02780 Transketolase_C [H]
EC number: =1.2.7.1 [H]
Molecular weight: Translated: 42965; Mature: 42965
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEQLEGSRAVATAVARCRPAVIAAYPISPQTHIVEALSDFVRTGELRGCEYLMVESEFG CCCCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCC AMSACIGASGVGARTYTATASQGLLFMAEALFNASGLGLPIVMTVANRAIGSPINIWNDQ HHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCC SDSMSQRDAGWVQLFAVSNQEAVDLHLQAFVLAERLSLPVMVCMDGFVLTHAVEAIDVPE CCCHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHCCCCC QAQVDAFLPPFVPRQHLDPSDPITIGSMVGPEAFTEVRYLMHDQQLAALDELPRIQRDFH CCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEFGRDTGGLVRPYRTEDADVVVVALGSVLGGVNEVVDALREDGIAAGSLGITCFRPWPL HHHCCCCCCCCCCCCCCCCCEEEEEHHHHHCCHHHHHHHHHHCCCCCCCCCEEEECCCCH DAVREALGSARQVVVVERAFSPGVGGIVGRDVRLALRGTVGGGPAVYDVVAGLGGRPVTR HHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCH GSLRRLVDDVLAERLDPRGLHFLDLDHDLLARAGTPWRRTS HHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHCCCCCCCCC >Mature Secondary Structure MFEQLEGSRAVATAVARCRPAVIAAYPISPQTHIVEALSDFVRTGELRGCEYLMVESEFG CCCCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCC AMSACIGASGVGARTYTATASQGLLFMAEALFNASGLGLPIVMTVANRAIGSPINIWNDQ HHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCC SDSMSQRDAGWVQLFAVSNQEAVDLHLQAFVLAERLSLPVMVCMDGFVLTHAVEAIDVPE CCCHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHCCCCC QAQVDAFLPPFVPRQHLDPSDPITIGSMVGPEAFTEVRYLMHDQQLAALDELPRIQRDFH CCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEFGRDTGGLVRPYRTEDADVVVVALGSVLGGVNEVVDALREDGIAAGSLGITCFRPWPL HHHCCCCCCCCCCCCCCCCCEEEEEHHHHHCCHHHHHHHHHHCCCCCCCCCEEEECCCCH DAVREALGSARQVVVVERAFSPGVGGIVGRDVRLALRGTVGGGPAVYDVVAGLGGRPVTR HHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCH GSLRRLVDDVLAERLDPRGLHFLDLDHDLLARAGTPWRRTS HHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8620891 [H]