| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715320
Identifier: 119715320
GI number: 119715320
Start: 1139738
End: 1140883
Strand: Direct
Name: 119715320
Synonym: Noca_1081
Alternate gene names: NA
Gene position: 1139738-1140883 (Clockwise)
Preceding gene: 119715319
Following gene: 119715321
Centisome position: 22.86
GC content: 63.09
Gene sequence:
>1146_bases GTGGCGTACTCCTCCAAGAAGCCAGCGACCCCAGCCGAGCGGGCAATCGCATCCACCGGCATCCCGGCCCGCCTCGACGC GCTCCTTTGGCAGGCGCTTGGCAACGGCGAGACTCCCGCGCTCGCTGATCTGGTCGCGTCCGCACAGGGGAAGCCACGCG AACACGTGGTTGCCGAAACCCTCATCGTCCAAGACGCCAATCCACTGGAGGTGATTCACCCCAAGTCGTTCGTCACTTAC GTGGAACGCACAGTCGGTGGCGTCTCGGCAATCAAGGTTGACGACGAGCGAGGCGACTTCGTGCTGTCGGCTTGGCCGAC CGCTCATGAGGGCGTCTTCCACCTCATCGCGTCCATCCCGTCCACCGACCCTCGCTGGGGCAAGGTGGACCGGTGGGTGG GCAAGGCACGCCCGCATGCCGTCCGATGCTTCCTTGATCATGACGACTTCATAGCCATCGGCACGGCACTCTCGGAGCAC GACGAAGTTGAGGTTCAACGAGTCTCTGGTCGCAAGCACGAGGACCGGTCAACGTGGAATCGAAGTTTCCGTGCGTACGA CGATGACCACCTCCGTCCCGACCACCGGGAGATGGTCGCAGAAGCCGAGTCCGTCGGCGTTTCGCTTCGGACCCTCCACA TGCACGTCGGGGACGTCATGGACGTTGTCGTACGACGCGTTGCTGGTGCCACCTTCAACAAGGGTGACTTTGAGGTCTTC GAGAACCGCGTCCTAAGCCGCCTCGCACACGCTGCCGCGCGGCGCCGAGACCTCTTCGTTGATCGTGAGCGCCGCCTGAA CGAGCCGCCCAAGCGGCCCATCGAAGTCCGCCTCGCCGCGCCGCTCTTCACCGATCCTGAGGCGACCGGCGAAGTCATTC ACATGCTGGAGCGCACGAGCGACGTCGCCTTCGCCGTGGTGCACCGAAATCCTTACCTTCATGTCGTCGTGACAGACAAC ACCGACGGATCGAACTACGACCTTTTCGTTACCAGCCCCAGCGCGATTGAGATCCACCCCGGATTCCGCGCGAGTCTGGG ATCTCTCACGCGGCTCTCTCAAGACCTCGGCGACTATTTCGAGGCTGACAACCTCCGCGAGACTCCGTTGGCTGAACCGT CGTCCATCTTCGACCTCATCGGCTGA
Upstream 100 bases:
>100_bases AGGCAAGTCACTGAGTCGCCGATGGCCGCTACTGTCACCGAACAGATGGTCACCGCAAGCTCGGCGGTGACTCAACGACT GACTTGGGACGGGGGACGGC
Downstream 100 bases:
>100_bases CACCAGTGGCGAGGTCGAGGCCGCGCACCAGCGCCGTGACACAGCAGAGTCTCCTCGACGACTACGACCTCTACGACCAG TACGTCGACGTTGTGTCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MAYSSKKPATPAERAIASTGIPARLDALLWQALGNGETPALADLVASAQGKPREHVVAETLIVQDANPLEVIHPKSFVTY VERTVGGVSAIKVDDERGDFVLSAWPTAHEGVFHLIASIPSTDPRWGKVDRWVGKARPHAVRCFLDHDDFIAIGTALSEH DEVEVQRVSGRKHEDRSTWNRSFRAYDDDHLRPDHREMVAEAESVGVSLRTLHMHVGDVMDVVVRRVAGATFNKGDFEVF ENRVLSRLAHAAARRRDLFVDRERRLNEPPKRPIEVRLAAPLFTDPEATGEVIHMLERTSDVAFAVVHRNPYLHVVVTDN TDGSNYDLFVTSPSAIEIHPGFRASLGSLTRLSQDLGDYFEADNLRETPLAEPSSIFDLIG
Sequences:
>Translated_381_residues MAYSSKKPATPAERAIASTGIPARLDALLWQALGNGETPALADLVASAQGKPREHVVAETLIVQDANPLEVIHPKSFVTY VERTVGGVSAIKVDDERGDFVLSAWPTAHEGVFHLIASIPSTDPRWGKVDRWVGKARPHAVRCFLDHDDFIAIGTALSEH DEVEVQRVSGRKHEDRSTWNRSFRAYDDDHLRPDHREMVAEAESVGVSLRTLHMHVGDVMDVVVRRVAGATFNKGDFEVF ENRVLSRLAHAAARRRDLFVDRERRLNEPPKRPIEVRLAAPLFTDPEATGEVIHMLERTSDVAFAVVHRNPYLHVVVTDN TDGSNYDLFVTSPSAIEIHPGFRASLGSLTRLSQDLGDYFEADNLRETPLAEPSSIFDLIG >Mature_380_residues AYSSKKPATPAERAIASTGIPARLDALLWQALGNGETPALADLVASAQGKPREHVVAETLIVQDANPLEVIHPKSFVTYV ERTVGGVSAIKVDDERGDFVLSAWPTAHEGVFHLIASIPSTDPRWGKVDRWVGKARPHAVRCFLDHDDFIAIGTALSEHD EVEVQRVSGRKHEDRSTWNRSFRAYDDDHLRPDHREMVAEAESVGVSLRTLHMHVGDVMDVVVRRVAGATFNKGDFEVFE NRVLSRLAHAAARRRDLFVDRERRLNEPPKRPIEVRLAAPLFTDPEATGEVIHMLERTSDVAFAVVHRNPYLHVVVTDNT DGSNYDLFVTSPSAIEIHPGFRASLGSLTRLSQDLGDYFEADNLRETPLAEPSSIFDLIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42307; Mature: 42176
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYSSKKPATPAERAIASTGIPARLDALLWQALGNGETPALADLVASAQGKPREHVVAET CCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHH LIVQDANPLEVIHPKSFVTYVERTVGGVSAIKVDDERGDFVLSAWPTAHEGVFHLIASIP HEECCCCCCEEECCHHHHHHHHHHHCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHCC STDPRWGKVDRWVGKARPHAVRCFLDHDDFIAIGTALSEHDEVEVQRVSGRKHEDRSTWN CCCCCCCCHHHHHHCCCCCEEEEEECCCCEEEEECHHCCCCHHHHHHHCCCCCCCHHHHH RSFRAYDDDHLRPDHREMVAEAESVGVSLRTLHMHVGDVMDVVVRRVAGATFNKGDFEVF CCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHH ENRVLSRLAHAAARRRDLFVDRERRLNEPPKRPIEVRLAAPLFTDPEATGEVIHMLERTS HHHHHHHHHHHHHHHHHHEECHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCC DVAFAVVHRNPYLHVVVTDNTDGSNYDLFVTSPSAIEIHPGFRASLGSLTRLSQDLGDYF CEEEEEEECCCEEEEEEECCCCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHH EADNLRETPLAEPSSIFDLIG HCCCCCCCCCCCCHHHHHHCC >Mature Secondary Structure AYSSKKPATPAERAIASTGIPARLDALLWQALGNGETPALADLVASAQGKPREHVVAET CCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHH LIVQDANPLEVIHPKSFVTYVERTVGGVSAIKVDDERGDFVLSAWPTAHEGVFHLIASIP HEECCCCCCEEECCHHHHHHHHHHHCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHCC STDPRWGKVDRWVGKARPHAVRCFLDHDDFIAIGTALSEHDEVEVQRVSGRKHEDRSTWN CCCCCCCCHHHHHHCCCCCEEEEEECCCCEEEEECHHCCCCHHHHHHHCCCCCCCHHHHH RSFRAYDDDHLRPDHREMVAEAESVGVSLRTLHMHVGDVMDVVVRRVAGATFNKGDFEVF CCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHH ENRVLSRLAHAAARRRDLFVDRERRLNEPPKRPIEVRLAAPLFTDPEATGEVIHMLERTS HHHHHHHHHHHHHHHHHHEECHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCC DVAFAVVHRNPYLHVVVTDNTDGSNYDLFVTSPSAIEIHPGFRASLGSLTRLSQDLGDYF CEEEEEEECCCEEEEEEECCCCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHH EADNLRETPLAEPSSIFDLIG HCCCCCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA