| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715289
Identifier: 119715289
GI number: 119715289
Start: 1105779
End: 1106060
Strand: Direct
Name: 119715289
Synonym: Noca_1049
Alternate gene names: NA
Gene position: 1105779-1106060 (Clockwise)
Preceding gene: 119715287
Following gene: 119715290
Centisome position: 22.18
GC content: 63.12
Gene sequence:
>282_bases ATGTCGCGCGCTGCCTTCGGACAGACCTATCGTCTGGAGATCATGCTGGCCGTTGCGGAGGCCGAGGACGGCCTTGTAAC CCTGACGGACCTCGCACGGTCACTGGAACTATCGACGAGCAACGTCCAAGTTGCGCTGAAAAGTCTGGTCGCCACCGGAC TGTTGTCGGAGCTGCCCAAGGGCGACAATCGCCGAAGGTACCTGCTGCGGAACCCGAGCCCAGCGTGGGACTGGGCTCGG CAGATGCTCGACCAGGTGTCGGTAGTTCCGGCGGACCGATGA
Upstream 100 bases:
>100_bases GATTCGCATCGACTGCACCCTCCGTCACGTTACGTGAATCGCGTAACACGTTTCTTGTAAGATAGCACCCATGACGGTCG ACACCGAGGGACTGCGTGCC
Downstream 100 bases:
>100_bases GCGCCCCCGGGCCGCGCGACTGAACGGTTTCACCACGATCTGTCGGTCGGCTCCCATACGGTTGCCTCGTGCTCGAGCGG ACCACCATCGACGAGGTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MSRAAFGQTYRLEIMLAVAEAEDGLVTLTDLARSLELSTSNVQVALKSLVATGLLSELPKGDNRRRYLLRNPSPAWDWAR QMLDQVSVVPADR
Sequences:
>Translated_93_residues MSRAAFGQTYRLEIMLAVAEAEDGLVTLTDLARSLELSTSNVQVALKSLVATGLLSELPKGDNRRRYLLRNPSPAWDWAR QMLDQVSVVPADR >Mature_92_residues SRAAFGQTYRLEIMLAVAEAEDGLVTLTDLARSLELSTSNVQVALKSLVATGLLSELPKGDNRRRYLLRNPSPAWDWARQ MLDQVSVVPADR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10315; Mature: 10184
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRAAFGQTYRLEIMLAVAEAEDGLVTLTDLARSLELSTSNVQVALKSLVATGLLSELPK CCCCCCCCEEEEEEEEEEECCCCCEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC GDNRRRYLLRNPSPAWDWARQMLDQVSVVPADR CCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SRAAFGQTYRLEIMLAVAEAEDGLVTLTDLARSLELSTSNVQVALKSLVATGLLSELPK CCCCCCCEEEEEEEEEEECCCCCEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC GDNRRRYLLRNPSPAWDWARQMLDQVSVVPADR CCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA