| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715288
Identifier: 119715288
GI number: 119715288
Start: 1104941
End: 1105687
Strand: Reverse
Name: 119715288
Synonym: Noca_1048
Alternate gene names: NA
Gene position: 1105687-1104941 (Counterclockwise)
Preceding gene: 119715291
Following gene: 119715285
Centisome position: 22.18
GC content: 63.72
Gene sequence:
>747_bases ATGCGAATCAAGTCCGGGATCGAGTGGACAGAGGTCACCTGGAACCCGACCACTGGTTGCGACCGGATCAGCGAAGGCTG CGACAACTGCTACGCGCTCGCAATGGCCAAGCGGCTCAAGGCGATGGGCTCCGAGCGCTATCAAGCGGACGGCGACCCTC GCACTTCCGGGCCAGGATTCGCACTCACCCTCCACCCCGACGCACTCGCACAGCCGTTCCGCTGGGGCGGCAGTCGATTG GTCTTCGTCAACTCGATGAGCGACCTGTTCCACGCGAAGGTCCCGATCTCGTTCGTCCGCGACGTCTTCGATGTCATCGC ACGCACGCCGCAGCACACGTATCAGTTGCTGACCAAGCGGTCAGCGCGCCTACCCAAGGTCGCCGACAAGCTCGATTGGC CGCCGAACCTCTGGTTGGGCGTCAGCGTTGAGAACTCCGACCACGTCTACCGCGTAGACCACCTCCGGCAGGTGCCCGCG GCAGTGCGGTTCCTCTCGTGCGAACCGCTCATCGGCCCACTGCCCGACTTGGATCTGAATGGCATCGGCTGGGTGATCAC GGGCGGCGAGTCCGGTCCGAGAGCACGTCCACTCGACCCCGACTGGGTACGAGAGATCCGAGACAACTGTGTGGCGTCAG GCGTGCCGTTCTTTCACAAGCAATGGGGCGGCAGGACACCAAAGGAACACGGTCGTCACCTCGATGGCACCTTGTGGGAC GAGATGCCCAAGCTCGTCACCGCGTGA
Upstream 100 bases:
>100_bases GCGCGACATGGCACGCAGTCCCTCGGTGTCGACCGTCATGGGTGCTATCTTACAAGAAACGTGTTACGCGATTCACGTAA CGTGACGGAGGGTGCAGTCG
Downstream 100 bases:
>100_bases CGATGACTTGCTTCCACAGGTCCTTCTTCTTGTCCCGAGGATGAACTGAGCCCGCATCAGCGAGCTGATCCCAGGCCTTC CGAATCGTCGACTCCCCAGC
Product: phage Gp37Gp68 family protein
Products: NA
Alternate protein names: Phage /Gp; Bacteriophage Protein Gp; Gp37gp68 Family Protein; ABC Transporter Subunit; Phage ; ABC Transporter; Bacteriophage Protein; Phage Protein Gp; Radical SAM Domain-Containing Protein; Phage Protein; Phage Gp
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MRIKSGIEWTEVTWNPTTGCDRISEGCDNCYALAMAKRLKAMGSERYQADGDPRTSGPGFALTLHPDALAQPFRWGGSRL VFVNSMSDLFHAKVPISFVRDVFDVIARTPQHTYQLLTKRSARLPKVADKLDWPPNLWLGVSVENSDHVYRVDHLRQVPA AVRFLSCEPLIGPLPDLDLNGIGWVITGGESGPRARPLDPDWVREIRDNCVASGVPFFHKQWGGRTPKEHGRHLDGTLWD EMPKLVTA
Sequences:
>Translated_248_residues MRIKSGIEWTEVTWNPTTGCDRISEGCDNCYALAMAKRLKAMGSERYQADGDPRTSGPGFALTLHPDALAQPFRWGGSRL VFVNSMSDLFHAKVPISFVRDVFDVIARTPQHTYQLLTKRSARLPKVADKLDWPPNLWLGVSVENSDHVYRVDHLRQVPA AVRFLSCEPLIGPLPDLDLNGIGWVITGGESGPRARPLDPDWVREIRDNCVASGVPFFHKQWGGRTPKEHGRHLDGTLWD EMPKLVTA >Mature_248_residues MRIKSGIEWTEVTWNPTTGCDRISEGCDNCYALAMAKRLKAMGSERYQADGDPRTSGPGFALTLHPDALAQPFRWGGSRL VFVNSMSDLFHAKVPISFVRDVFDVIARTPQHTYQLLTKRSARLPKVADKLDWPPNLWLGVSVENSDHVYRVDHLRQVPA AVRFLSCEPLIGPLPDLDLNGIGWVITGGESGPRARPLDPDWVREIRDNCVASGVPFFHKQWGGRTPKEHGRHLDGTLWD EMPKLVTA
Specific function: Unknown
COG id: COG4422
COG function: function code S; Bacteriophage protein gp37
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27778; Mature: 27778
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIKSGIEWTEVTWNPTTGCDRISEGCDNCYALAMAKRLKAMGSERYQADGDPRTSGPGF CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCE ALTLHPDALAQPFRWGGSRLVFVNSMSDLFHAKVPISFVRDVFDVIARTPQHTYQLLTKR EEEECCHHHHCHHHCCCCEEEEEECHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHH SARLPKVADKLDWPPNLWLGVSVENSDHVYRVDHLRQVPAAVRFLSCEPLIGPLPDLDLN HCCCCHHHHHCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCC GIGWVITGGESGPRARPLDPDWVREIRDNCVASGVPFFHKQWGGRTPKEHGRHLDGTLWD CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHCCCCCCHHHH EMPKLVTA HHHHHHCC >Mature Secondary Structure MRIKSGIEWTEVTWNPTTGCDRISEGCDNCYALAMAKRLKAMGSERYQADGDPRTSGPGF CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCE ALTLHPDALAQPFRWGGSRLVFVNSMSDLFHAKVPISFVRDVFDVIARTPQHTYQLLTKR EEEECCHHHHCHHHCCCCEEEEEECHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHH SARLPKVADKLDWPPNLWLGVSVENSDHVYRVDHLRQVPAAVRFLSCEPLIGPLPDLDLN HCCCCHHHHHCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCC GIGWVITGGESGPRARPLDPDWVREIRDNCVASGVPFFHKQWGGRTPKEHGRHLDGTLWD CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHCCCCCCHHHH EMPKLVTA HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA