| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715272
Identifier: 119715272
GI number: 119715272
Start: 1084987
End: 1086417
Strand: Reverse
Name: 119715272
Synonym: Noca_1031
Alternate gene names: NA
Gene position: 1086417-1084987 (Counterclockwise)
Preceding gene: 119715273
Following gene: 119715271
Centisome position: 21.79
GC content: 67.16
Gene sequence:
>1431_bases ATGCCGATCCTGCTCATCCTCGCCGCATGCCTTACCGTGCTGGGCACCGGCCTTGTCGTACCGGAACTCCTGAAAGCAGT CGAGAAGCGCCGTCGAGACGCAGAACTCGCTGCACGCCAGCAGGCCAAGGAGGCTCGCCGCCTCCAGCGCCAGAGTGCGA AGGTCGACCGCCGCGCGCGCCGTGCGGCTGCGGCCGAGCGTCAACTCGAGCTGGACGAGATCCGCTCTGACCCGCACCGC TACCTCTACCGGATGATGCTCGCCGCTCTGCCGCGGATCATCCGCCGCCGCGGCGACCAAGCGGCCGCCTCGGTAGCAAT CCACCGCGCGACAGGGAGGCACCAGGCCGCGTCTAAGGCACTCGCCGACTTCGACGAGGCCAACCGCTGGGTCACGAGCG AAACCGGCAAGAAGGTCGTCCTCTGGGGCCAACGCCTCGCCCTGCCCGTGTTCGGGTTCGCGATCCTGCTCGACGGCTGG GGAACGACAGCCGCATTCGAAGGTCCGCTCGGGTACGTCCTGGCACCCGCCTTTGTCCTCCTCATGGCCCTAGCGTCTAT CGTCGTCTGCTGGGGACTCGCGCTGTTCGATCAGCAGGCTAAGGCGTTTAGCTCCTCCGCACGCGGCCTCGCGGCGACCG GCGGTGCCCTGCTCTTCATCGGGAGCGCGGCGATGATGATGAACTGGGCGCCCGCCGGCCCTGCCAAGGTGTACGACCCG CAGATTCGCGACGCACAGATAGCTGTGGCCGACCTCCAGCGGAAGCCGAACAGCGCTGATCTGCAGGCTCAGATCGACGC CCTGAATGACCCGAAGACTGGGCAGATCGCGACACTTCAGGCACGCGAGAGGAACTACCAGCACGCCGCGCAATGGGCCG TCCTGGTCCTAGCTCTCGGCGATGCCATCGCAGCCGAAGCGCTCATGCTTGCACCACTCATCCGACGCCGCGAGCAGCTG CGGTACGACGTCGACCTCGCACAGCACGGCATCCAGGACGCGGAGGATAACGCGGCCGAGGTTGAGAACGCCATCCGGAC TGACGTCACGATCGTCGCCGACGCAATGACACGGGAAATGACGGCAGGTGGGCACGGGCTACCCGAGATTCAGCAGATGG TCGCCGACACGCTCGTGCGGCAGCGCGACCTGACCCTCTTCCGCGAGCTGCTGACCGGAGAAGAGGTCGCCAACGTGGCC GACAACGCGATGGACGACCACGACACAACACCCCGGGTCGTGCCAGGCGAGGTCGTGGACGATCGCACGCCCCCTGCTCC GACGCCCCCGGCCGAGCAGCAGGCCATGTACGCCGCCGACAACACGCCGGGAACTGGCTACCTCCCGGCTGTGGTCGACG AAGAGGTTCGGATGCCCGACCGCCACGCCGCCCGTTCGGTCAACCTCGATGACCTCGATCAGTCCCTCTGA
Upstream 100 bases:
>100_bases GAGGCGGCCTCCGAAGCCGTGCACGACTGGCTCGGCCGCTGAACCGTCGGGGAACGGTTCGAAAGCCAGCAGTTGCTCCT CACTATCCAAGGGAACCCCA
Downstream 100 bases:
>100_bases GAACCGAAACCAGCTAAGGAACAAACCATGAGCAAGTACGTCTCCCAGCGCACGCTGGTCACGGCGCAGATCAGCGCCGA GCTCGCGACGAGCCTCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 476; Mature: 475
Protein sequence:
>476_residues MPILLILAACLTVLGTGLVVPELLKAVEKRRRDAELAARQQAKEARRLQRQSAKVDRRARRAAAAERQLELDEIRSDPHR YLYRMMLAALPRIIRRRGDQAAASVAIHRATGRHQAASKALADFDEANRWVTSETGKKVVLWGQRLALPVFGFAILLDGW GTTAAFEGPLGYVLAPAFVLLMALASIVVCWGLALFDQQAKAFSSSARGLAATGGALLFIGSAAMMMNWAPAGPAKVYDP QIRDAQIAVADLQRKPNSADLQAQIDALNDPKTGQIATLQARERNYQHAAQWAVLVLALGDAIAAEALMLAPLIRRREQL RYDVDLAQHGIQDAEDNAAEVENAIRTDVTIVADAMTREMTAGGHGLPEIQQMVADTLVRQRDLTLFRELLTGEEVANVA DNAMDDHDTTPRVVPGEVVDDRTPPAPTPPAEQQAMYAADNTPGTGYLPAVVDEEVRMPDRHAARSVNLDDLDQSL
Sequences:
>Translated_476_residues MPILLILAACLTVLGTGLVVPELLKAVEKRRRDAELAARQQAKEARRLQRQSAKVDRRARRAAAAERQLELDEIRSDPHR YLYRMMLAALPRIIRRRGDQAAASVAIHRATGRHQAASKALADFDEANRWVTSETGKKVVLWGQRLALPVFGFAILLDGW GTTAAFEGPLGYVLAPAFVLLMALASIVVCWGLALFDQQAKAFSSSARGLAATGGALLFIGSAAMMMNWAPAGPAKVYDP QIRDAQIAVADLQRKPNSADLQAQIDALNDPKTGQIATLQARERNYQHAAQWAVLVLALGDAIAAEALMLAPLIRRREQL RYDVDLAQHGIQDAEDNAAEVENAIRTDVTIVADAMTREMTAGGHGLPEIQQMVADTLVRQRDLTLFRELLTGEEVANVA DNAMDDHDTTPRVVPGEVVDDRTPPAPTPPAEQQAMYAADNTPGTGYLPAVVDEEVRMPDRHAARSVNLDDLDQSL >Mature_475_residues PILLILAACLTVLGTGLVVPELLKAVEKRRRDAELAARQQAKEARRLQRQSAKVDRRARRAAAAERQLELDEIRSDPHRY LYRMMLAALPRIIRRRGDQAAASVAIHRATGRHQAASKALADFDEANRWVTSETGKKVVLWGQRLALPVFGFAILLDGWG TTAAFEGPLGYVLAPAFVLLMALASIVVCWGLALFDQQAKAFSSSARGLAATGGALLFIGSAAMMMNWAPAGPAKVYDPQ IRDAQIAVADLQRKPNSADLQAQIDALNDPKTGQIATLQARERNYQHAAQWAVLVLALGDAIAAEALMLAPLIRRREQLR YDVDLAQHGIQDAEDNAAEVENAIRTDVTIVADAMTREMTAGGHGLPEIQQMVADTLVRQRDLTLFRELLTGEEVANVAD NAMDDHDTTPRVVPGEVVDDRTPPAPTPPAEQQAMYAADNTPGTGYLPAVVDEEVRMPDRHAARSVNLDDLDQSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51836; Mature: 51705
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPILLILAACLTVLGTGLVVPELLKAVEKRRRDAELAARQQAKEARRLQRQSAKVDRRAR CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAAAAERQLELDEIRSDPHRYLYRMMLAALPRIIRRRGDQAAASVAIHRATGRHQAASKA HHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHH LADFDEANRWVTSETGKKVVLWGQRLALPVFGFAILLDGWGTTAAFEGPLGYVLAPAFVL HHHHHHHCCEEECCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH LMALASIVVCWGLALFDQQAKAFSSSARGLAATGGALLFIGSAAMMMNWAPAGPAKVYDP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEHHHHHHHHCCCCCCCCCCCCC QIRDAQIAVADLQRKPNSADLQAQIDALNDPKTGQIATLQARERNYQHAAQWAVLVLALG CCCCHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCEEEEHHHHCCHHHHHHHHHHHHHHH DAIAAEALMLAPLIRRREQLRYDVDLAQHGIQDAEDNAAEVENAIRTDVTIVADAMTREM HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH TAGGHGLPEIQQMVADTLVRQRDLTLFRELLTGEEVANVADNAMDDHDTTPRVVPGEVVD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCC DRTPPAPTPPAEQQAMYAADNTPGTGYLPAVVDEEVRMPDRHAARSVNLDDLDQSL CCCCCCCCCCCHHCCEEECCCCCCCCCCCHHHCHHHCCCCHHHHCCCCHHHHHCCC >Mature Secondary Structure PILLILAACLTVLGTGLVVPELLKAVEKRRRDAELAARQQAKEARRLQRQSAKVDRRAR HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAAAAERQLELDEIRSDPHRYLYRMMLAALPRIIRRRGDQAAASVAIHRATGRHQAASKA HHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHH LADFDEANRWVTSETGKKVVLWGQRLALPVFGFAILLDGWGTTAAFEGPLGYVLAPAFVL HHHHHHHCCEEECCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH LMALASIVVCWGLALFDQQAKAFSSSARGLAATGGALLFIGSAAMMMNWAPAGPAKVYDP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEHHHHHHHHCCCCCCCCCCCCC QIRDAQIAVADLQRKPNSADLQAQIDALNDPKTGQIATLQARERNYQHAAQWAVLVLALG CCCCHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCEEEEHHHHCCHHHHHHHHHHHHHHH DAIAAEALMLAPLIRRREQLRYDVDLAQHGIQDAEDNAAEVENAIRTDVTIVADAMTREM HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH TAGGHGLPEIQQMVADTLVRQRDLTLFRELLTGEEVANVADNAMDDHDTTPRVVPGEVVD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCC DRTPPAPTPPAEQQAMYAADNTPGTGYLPAVVDEEVRMPDRHAARSVNLDDLDQSL CCCCCCCCCCCHHCCEEECCCCCCCCCCCHHHCHHHCCCCHHHHCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA