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The map label for this gene is yxjL [H]

Identifier: 119715261

GI number: 119715261

Start: 1071786

End: 1072442

Strand: Direct

Name: yxjL [H]

Synonym: Noca_1020

Alternate gene names: 119715261

Gene position: 1071786-1072442 (Clockwise)

Preceding gene: 119715260

Following gene: 119715262

Centisome position: 21.5

GC content: 71.99

Gene sequence:

>657_bases
ATGACGATCCGGGTGCTGGTCGTCGACGACCAGTCGATGGTGCGGGCCGGGCTGCGGATGCTGCTGGCCGACGAGCCGGA
CATCGAGGTGGTCGCGGAGGCCGGCAACGGCCGGGAGGCGGTCGCCCAGGCTGCGCGCTTCCACCCGGACGTCGTGCTGA
TGGACATCCGGATGCCCGAGCTCGACGGCCTCGAGGCGACCCGCCGGATCCTGGCGGCCGGCGACACCGCGCGCGTGCTC
GTCCTCACGACGTTCAACCTCGACGAGTACGTCTACGAGGCGCTGGGCGCCGGCGCCAGCGGGTTCGTGCTCAAGGACGA
CCCGCCCGAACAGCTGATCGCCGCCGTCCGGACCATCGCCGACGGCGACGCGCTGCTCTCGCCCACCGTCACCCGCCGGG
TGATCCGCGAGTTCACCCGGCTGCGCCGGCAGCCGCCGCCCGCGGCGGTGGCGACGCTGACCGGCCGCGAGCTGGAGGTG
TTCCGGCTGATCACCCAGGGCCTGTCCAACGCCGAGATCGGGCGGGAGCTGTTCATCAGCGACACCACCGTGAAGACCCA
CGTGACCCGGCTGTTCCAGAAGCTCGATCTGCGCGACCGGGCCCAGGCGATCGTGCTCGCCTACCAGACCGGCATCTTCG
CGCCCACGGACCGCTGA

Upstream 100 bases:

>100_bases
GCGAGCGGGTCAAGATCTACGGCGGGGAGATGACGGCGGGCCGAGGTCCTGCCGGAGGGTTCGCGGTGCGCGCACGGCTT
CCGTTGGACGGTGACGGGTC

Downstream 100 bases:

>100_bases
GGCCGCTCCCGGGGTCCGACCAAGGTCGGACCCCGGGTCATGGGGTGGTCGTGGCACGAACGCGACCTGACGACGACGCG
CCCGGCCGGTCGCACTCCTA

Product: response regulator receiver

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MTIRVLVVDDQSMVRAGLRMLLADEPDIEVVAEAGNGREAVAQAARFHPDVVLMDIRMPELDGLEATRRILAAGDTARVL
VLTTFNLDEYVYEALGAGASGFVLKDDPPEQLIAAVRTIADGDALLSPTVTRRVIREFTRLRRQPPPAAVATLTGRELEV
FRLITQGLSNAEIGRELFISDTTVKTHVTRLFQKLDLRDRAQAIVLAYQTGIFAPTDR

Sequences:

>Translated_218_residues
MTIRVLVVDDQSMVRAGLRMLLADEPDIEVVAEAGNGREAVAQAARFHPDVVLMDIRMPELDGLEATRRILAAGDTARVL
VLTTFNLDEYVYEALGAGASGFVLKDDPPEQLIAAVRTIADGDALLSPTVTRRVIREFTRLRRQPPPAAVATLTGRELEV
FRLITQGLSNAEIGRELFISDTTVKTHVTRLFQKLDLRDRAQAIVLAYQTGIFAPTDR
>Mature_217_residues
TIRVLVVDDQSMVRAGLRMLLADEPDIEVVAEAGNGREAVAQAARFHPDVVLMDIRMPELDGLEATRRILAAGDTARVLV
LTTFNLDEYVYEALGAGASGFVLKDDPPEQLIAAVRTIADGDALLSPTVTRRVIREFTRLRRQPPPAAVATLTGRELEVF
RLITQGLSNAEIGRELFISDTTVKTHVTRLFQKLDLRDRAQAIVLAYQTGIFAPTDR

Specific function: Probable member of the two-component regulatory system yxjM/yxjL [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=206, Percent_Identity=39.3203883495146, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI1788222, Length=211, Percent_Identity=32.2274881516588, Blast_Score=123, Evalue=8e-30,
Organism=Escherichia coli, GI1787473, Length=209, Percent_Identity=37.799043062201, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1790102, Length=197, Percent_Identity=37.0558375634518, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1788712, Length=196, Percent_Identity=27.5510204081633, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1786747, Length=201, Percent_Identity=28.8557213930348, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI87082052, Length=103, Percent_Identity=36.8932038834951, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1788550, Length=102, Percent_Identity=41.1764705882353, Blast_Score=68, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR011990
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 23993; Mature: 23862

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRVLVVDDQSMVRAGLRMLLADEPDIEVVAEAGNGREAVAQAARFHPDVVLMDIRMPE
CEEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCC
LDGLEATRRILAAGDTARVLVLTTFNLDEYVYEALGAGASGFVLKDDPPEQLIAAVRTIA
CCCHHHHHHHHHCCCCEEEEEEEEECHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHC
DGDALLSPTVTRRVIREFTRLRRQPPPAAVATLTGRELEVFRLITQGLSNAEIGRELFIS
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCEEEEC
DTTVKTHVTRLFQKLDLRDRAQAIVLAYQTGIFAPTDR
CCHHHHHHHHHHHHHCCHHHHHEEEEEEECCCCCCCCC
>Mature Secondary Structure 
TIRVLVVDDQSMVRAGLRMLLADEPDIEVVAEAGNGREAVAQAARFHPDVVLMDIRMPE
EEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCC
LDGLEATRRILAAGDTARVLVLTTFNLDEYVYEALGAGASGFVLKDDPPEQLIAAVRTIA
CCCHHHHHHHHHCCCCEEEEEEEEECHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHC
DGDALLSPTVTRRVIREFTRLRRQPPPAAVATLTGRELEVFRLITQGLSNAEIGRELFIS
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCEEEEC
DTTVKTHVTRLFQKLDLRDRAQAIVLAYQTGIFAPTDR
CCHHHHHHHHHHHHHCCHHHHHEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8978088; 8969509; 9384377 [H]