| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715211
Identifier: 119715211
GI number: 119715211
Start: 1015173
End: 1015643
Strand: Reverse
Name: 119715211
Synonym: Noca_0966
Alternate gene names: NA
Gene position: 1015643-1015173 (Counterclockwise)
Preceding gene: 119715212
Following gene: 119715209
Centisome position: 20.37
GC content: 74.52
Gene sequence:
>471_bases ATGAGACAGATCACGCGCGCGCTCGCGGCCTCGGCCGCCACGCTCGTGCTCGCCGCCGGTGCAGCCGGTCTGGTGACCAC CGCCCAGGCCGACGAGACGGCGCCCGCGCCGAGCGCCCCTTGCGCCAGGCAGACCGCCCAGGTCGAGAAGGCGGAGCAGG CCCTCGCGCGGGTGACGGCGGTCTTCGAGCGCAAGCAGGCCGCGGTCGACGAGGCCGAGACCGACCTCGCCGAGGCGACC ACGGGCAGGGAGCGGGCCGCCGCGAAGAACGCGCTCCGCAAGGCCGAGGCCGCCGAGGCCAAGGTCGCCAAGGTCAAGAA GGCGCAGCAGATGCGGCTGACCAAGGCCCAGCAGCGGCTCGACAAGTGCCTCGCCGGGCAGTCGCCCACCGAGACCCCGA CAGACACCCCGACGGACACCCCGACGGACACCCCGACGACTCCGGTCGCGGACCCGTCGGTCACCCCCTGA
Upstream 100 bases:
>100_bases GCCCGCGGGACCTGCCCGATCGGGCAGGTCCCGACCCCTCAAGAAGCGCGGTCCCCCGGCCGATGTTGCGACTGTCGGGA CAACTCTGAGAGGACCAAGC
Downstream 100 bases:
>100_bases CCGGTCCTCAGCGGCGGACCAGGAAGCGCGCCCGGCGGTGGGCGAGCGCGGCGCGGGCGGCATTCGTGCCGGGCGCGCCG TGCACGCCGCCGCCGGGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MRQITRALAASAATLVLAAGAAGLVTTAQADETAPAPSAPCARQTAQVEKAEQALARVTAVFERKQAAVDEAETDLAEAT TGRERAAAKNALRKAEAAEAKVAKVKKAQQMRLTKAQQRLDKCLAGQSPTETPTDTPTDTPTDTPTTPVADPSVTP
Sequences:
>Translated_156_residues MRQITRALAASAATLVLAAGAAGLVTTAQADETAPAPSAPCARQTAQVEKAEQALARVTAVFERKQAAVDEAETDLAEAT TGRERAAAKNALRKAEAAEAKVAKVKKAQQMRLTKAQQRLDKCLAGQSPTETPTDTPTDTPTDTPTTPVADPSVTP >Mature_156_residues MRQITRALAASAATLVLAAGAAGLVTTAQADETAPAPSAPCARQTAQVEKAEQALARVTAVFERKQAAVDEAETDLAEAT TGRERAAAKNALRKAEAAEAKVAKVKKAQQMRLTKAQQRLDKCLAGQSPTETPTDTPTDTPTDTPTTPVADPSVTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16148; Mature: 16148
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQITRALAASAATLVLAAGAAGLVTTAQADETAPAPSAPCARQTAQVEKAEQALARVTA CHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VFERKQAAVDEAETDLAEATTGRERAAAKNALRKAEAAEAKVAKVKKAQQMRLTKAQQRL HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DKCLAGQSPTETPTDTPTDTPTDTPTTPVADPSVTP HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRQITRALAASAATLVLAAGAAGLVTTAQADETAPAPSAPCARQTAQVEKAEQALARVTA CHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VFERKQAAVDEAETDLAEATTGRERAAAKNALRKAEAAEAKVAKVKKAQQMRLTKAQQRL HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DKCLAGQSPTETPTDTPTDTPTDTPTTPVADPSVTP HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA