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The map label for this gene is ychJ [C]

Identifier: 119715195

GI number: 119715195

Start: 998389

End: 998754

Strand: Reverse

Name: ychJ [C]

Synonym: Noca_0950

Alternate gene names: 119715195

Gene position: 998754-998389 (Counterclockwise)

Preceding gene: 119715199

Following gene: 119715192

Centisome position: 20.03

GC content: 74.59

Gene sequence:

>366_bases
ATGGATCTCCGGCGGACGTGCCCGTGCGGCTCCGGCACGGCGTACGACGCCTGCTGCGGCCGGCTGCACCGTGGCGCCGC
GCAGGCCGCGACCGCCGAGGAGCTGATGCGCTCGCGGTACGCCGCCTACGCGGTCGGTGAGACCGACTACGTGTTCCGCA
CCTGGCACCCACGCACCCGACCCGGTGACCTCGCCCCCGACCCGGTGCTCACCTGGACCGGCCTCCGCATCGAGGACGCC
GGCGAGGACTGGGTCGAGTTCGTGGCGTCGTACGAGCACGGCGGGGTGCCCGGCGAGCTGCGCGAGCGCAGCCGGTTCGA
GCAACGCGGCGGCCGGTGGGTGTACGTCGACGGCGACGTGGGCTAG

Upstream 100 bases:

>100_bases
TCGCACACCGGGCGGAACGCAGGTCGCCATCGACCCCGATGGGCGGGACCTTGGTCCCGACCCGGCGGCCTAGCGACCAA
GGATCGCTAGCCTGGTCCGG

Downstream 100 bases:

>100_bases
GTCGCGCCGTCACCGGCGAGGTGGCGCCCCGCGACGTGCGTCACCAGATCGGCCCAGGTGAGCAGCCCCACGACCTTCCC
GGTCCCGTCGGCGACCACGA

Product: SecC motif-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MDLRRTCPCGSGTAYDACCGRLHRGAAQAATAEELMRSRYAAYAVGETDYVFRTWHPRTRPGDLAPDPVLTWTGLRIEDA
GEDWVEFVASYEHGGVPGELRERSRFEQRGGRWVYVDGDVG

Sequences:

>Translated_121_residues
MDLRRTCPCGSGTAYDACCGRLHRGAAQAATAEELMRSRYAAYAVGETDYVFRTWHPRTRPGDLAPDPVLTWTGLRIEDA
GEDWVEFVASYEHGGVPGELRERSRFEQRGGRWVYVDGDVG
>Mature_121_residues
MDLRRTCPCGSGTAYDACCGRLHRGAAQAATAEELMRSRYAAYAVGETDYVFRTWHPRTRPGDLAPDPVLTWTGLRIEDA
GEDWVEFVASYEHGGVPGELRERSRFEQRGGRWVYVDGDVG

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family [H]

Homologues:

Organism=Escherichia coli, GI1787484, Length=127, Percent_Identity=37.007874015748, Blast_Score=86, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023006 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13513; Mature: 13513

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLRRTCPCGSGTAYDACCGRLHRGAAQAATAEELMRSRYAAYAVGETDYVFRTWHPRTR
CCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCC
PGDLAPDPVLTWTGLRIEDAGEDWVEFVASYEHGGVPGELRERSRFEQRGGRWVYVDGDV
CCCCCCCCEEEECCCEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCC
G
C
>Mature Secondary Structure
MDLRRTCPCGSGTAYDACCGRLHRGAAQAATAEELMRSRYAAYAVGETDYVFRTWHPRTR
CCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCC
PGDLAPDPVLTWTGLRIEDAGEDWVEFVASYEHGGVPGELRERSRFEQRGGRWVYVDGDV
CCCCCCCCEEEECCCEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]